RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Zdhhc17Q80TN5 632 aa9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Mxd3Q80US8 206 aa9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Erlin2Q8BFZ9 340 aa9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Camkk2Q8C078 588 aa9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Pgm2l1Q8CAA7 621 aa9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Irak2Q8CFA1 622 aa9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Vmn1r188Q8K3N2 308 aa9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Dlgap5Q8K4R9 808 aa9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Ppp1r14cQ8R4S0 164 aa9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Atp5c1Q91VR2 298 aaKnown RBP9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Lpgat1Q91YX5 370 aa9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Gnl2Q99LH1 728 aaKnown RBP9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Trpd52l3Q9CQ14 231 aa9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Trim39Q9ESN2 488 aa9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Cdk12Q14AX6 1484 aaKnown RBP9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Cyp4a30bA0A087WS15 508 aa9.65□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Exoc6bA6H5Z3 810 aa9.65□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Aldoart1A6ZI46 419 aa9.65□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Gm1661E9Q963 441 aa9.65□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Cer1O55233 272 aa9.65□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Htr1bP28334 386 aa9.65□□□□□ -0.87
Upf3b-201ENSMUST00000076265 PpargP37238 505 aa9.65□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Csnk2bP67871 215 aaKnown RBP9.65□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Gm5168Q4KL04 211 aa9.65□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Slc44a5Q5RJI2 710 aa9.65□□□□□ -0.87
Upf3b-201ENSMUST00000076265 GcdhQ60759 438 aa9.65□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Sema5aQ62217 1077 aa9.65□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Ifit1Q64282 463 aa9.65□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Ccdc66Q6NS45 935 aa9.65□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Klhl9Q6ZPT1 617 aa9.65□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Adgrg1Q8K209 687 aa9.65□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Pphln1Q8K2H1 381 aaKnown RBP9.65□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Bud13Q8R149 637 aa9.65□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Adcy3Q8VHH7 1145 aa9.65□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Pqbp1Q91VJ5 263 aaKnown RBP9.65□□□□□ -0.87
Upf3b-201ENSMUST00000076265 DnlzQ9D113 177 aa9.65□□□□□ -0.87
Upf3b-201ENSMUST00000076265 MycsQ9Z304 431 aa9.65□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Pfkfb3A7UAK5 555 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Otud4B2RRE7 1107 aaKnown RBP9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Rab11fip2G3XA57 512 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Gm12794L7MTS5 483 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Matn2O08746 956 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Pdha2P35487 391 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Il12bP43432 335 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Eif4a1P60843 406 aaKnown RBP9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Rcn1Q05186 325 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Lsg1Q3UM18 644 aaKnown RBP9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Sez6l2Q4V9Z5 910 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Arcn1Q5XJY5 511 aaKnown RBP9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Tcf4Q60722 670 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Frmd5Q6P5H6 517 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Tsen2Q6P7W5 460 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Vwa2Q70UZ7 791 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Nxf7Q80SZ6 620 aaKnown RBP9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 DdnQ80TS7 710 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 SpidrQ8BGX7 933 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Nod1Q8BHB0 953 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Spon2Q8BMS2 330 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Rps6kb1Q8BSK8 525 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Mknk2Q8CDB0 459 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Cnppd1Q8K158 407 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Unc5aQ8K1S4 898 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Slc26a8Q8R0C3 999 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Dph5Q9CWQ0 281 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Serinc3Q9QZI9 472 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Tnks1bp1P58871 1720 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Irs2P81122 1321 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Scgb1b24B1B0N6 92 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Eftud2O08810 971 aaKnown RBP9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 StrnO55106 780 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Ranbp1P34022 203 aaKnown RBP9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Igfbp2P47877 305 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Usp10P52479 792 aaKnown RBP9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 MlxipQ2VPU4 917 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Nlrc4Q3UP24 1024 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Q3V0E1 1183 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 DraxinQ6PAL1 343 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Ccnt2Q7TQK0 723 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 P4htmQ8BG58 503 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Tti2Q8BGV4 512 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Arid5bQ8BM75 1188 aaKnown RBP9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 IarsQ8BU30 1262 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 NemfQ8CCP0 1064 aaKnown RBP9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Q8CD60 292 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Spdye4bQ8CDE8 236 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Eif3bQ8JZQ9 803 aaKnown RBP9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Uhrf1Q8VDF2 782 aaKnown RBP9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Olfr812Q8VG64 310 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 AassQ99K67 926 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Slc26a5Q99NH7 744 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 KynuQ9CXF0 464 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Tubgcp4Q9D4F8 667 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 EhhadhQ9DBM2 718 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 NvlQ9DBY8 855 aaKnown RBP9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Lmbr1Q9JIT0 490 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Rps6ka2Q9WUT3 733 aa9.64□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Arhgef10Q8C033 1345 aa9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Gm5930D3Z257 264 aa9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 4931429L15RikE9PVU2 379 aa9.63□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Ttc7bE9Q6P5 843 aa9.63□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms