RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 FynP39688 537 aa12.48□□□□□ -0.41
Trim56-201ENSMUST00000054384 Llgl1Q80Y17 1036 aa12.48□□□□□ -0.41
Trim56-201ENSMUST00000054384 OtoaQ8K561 1137 aa12.48□□□□□ -0.41
Trim56-201ENSMUST00000054384 Eif4enif1Q9EST3 983 aaKnown RBP12.48□□□□□ -0.41
Trim56-201ENSMUST00000054384 PodxlQ9R0M4 503 aa12.48□□□□□ -0.41
Trim56-201ENSMUST00000054384 Myh11O08638 1972 aa12.48□□□□□ -0.41
Trim56-201ENSMUST00000054384 Orm2P07361 207 aa12.48□□□□□ -0.41
Trim56-201ENSMUST00000054384 Tlx1P43345 332 aa12.48□□□□□ -0.41
Trim56-201ENSMUST00000054384 Pdp2Q504M2 532 aa12.48□□□□□ -0.41
Trim56-201ENSMUST00000054384 Tlr13Q6R5N8 991 aa12.48□□□□□ -0.41
Trim56-201ENSMUST00000054384 Aldh5a1Q8BWF0 523 aa12.48□□□□□ -0.41
Trim56-201ENSMUST00000054384 GanQ8CA72 597 aa12.48□□□□□ -0.41
Trim56-201ENSMUST00000054384 Zbtb1Q91VL9 713 aa12.48□□□□□ -0.41
Trim56-201ENSMUST00000054384 Nol3Q9D1X0 220 aa12.48□□□□□ -0.41
Trim56-201ENSMUST00000054384 Actl7aQ9QY84 440 aa12.48□□□□□ -0.41
Trim56-201ENSMUST00000054384 PorP37040 678 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Cspg5Q71M36 566 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 BfarQ8R079 450 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Thg1lQ9CY52 298 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Q9D1F3 157 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Rcan1Q9JHG6 198 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 HdcP23738 662 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Fam228bQ497Q6 232 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 TfrcQ62351 763 aaKnown RBP12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Spata1Q9D5R4 444 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Capn9Q9D805 690 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Pus3Q9JI38 481 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Tmem47Q9JJG6 181 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Neu2Q9JMH3 379 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Vsnl1P62761 191 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Cep95Q8BVV7 827 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Mlc1Q8VHK5 382 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Mtif2Q91YJ5 727 aaKnown RBP12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 DarsQ922B2 501 aaKnown RBP12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Klra10Q9R1G6 266 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 CrkQ64010 304 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Tdpoz3Q717B4 365 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Gga3Q8BMI3 718 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Znf638Q61464 1960 aaKnown RBP12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Disp1Q3TDN0 1521 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Syndig1A2ANU3 258 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Akap1O08715 857 aaKnown RBP12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 CenpaO35216 134 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Nmt2O70311 529 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Ap2a2P17427 938 aaKnown RBP12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Hat1Q8BY71 416 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Cdc42bpaQ3UU96 1719 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Nedd4P46935 887 aaKnown RBP12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Ifit3Q64345 403 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Igf2bp3Q9CPN8 579 aaKnown RBP12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Mapk13Q9Z1B7 366 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Apoa4P06728 395 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Il1rapl1P59823 695 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 FancbQ5XJY6 703 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Rbm12b1Q80YR9 836 aaKnown RBP12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Gpsm2Q8VDU0 679 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Antxr1Q9CZ52 562 aa12.47□□□□□ -0.41
Trim56-201ENSMUST00000054384 Pcna-ps2A0A140T8V5 261 aa12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Gm5415E9PXF3 478 aa12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Erp29P57759 262 aaKnown RBP12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Kcnb1Q03717 857 aa12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Wdr41Q3UDP0 460 aa12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Ifi205aQ8CGE8 404 aa12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Ndufa10Q99LC3 355 aaKnown RBP12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Gm21964A0A1W2P7S4 437 aa12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Skint6A7XUZ6 1240 aa12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Cyp3a59D3Z2W7 503 aa12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Vmn2r87E9PZX4 848 aa12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Gm44G3UW88 330 aa12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Tmprss15P97435 1069 aa12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Serpina1cQ00896 412 aa12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Serpina1dQ00897 413 aa12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Arl13bQ640N2 427 aa12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Ccdc59Q8R2N0 240 aaKnown RBP12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Q8VDP2 222 aa12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Pcdhb21Q91V48 774 aa12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 AlkP97793 1621 aa12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Mucl2P02815 138 aa12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Tmem120bQ3TA38 339 aa12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Syce1lQ5D525 247 aa12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Kcna4Q61423 654 aa12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Map10Q8BJS7 891 aa12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Arih2Q9Z1K6 492 aa12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Cep170Q6A065 1588 aa12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Zc3h7bF8VPP8 982 aaKnown RBP12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Kdm7aQ3UWM4 940 aa12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Ece2Q80Z60 881 aa12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Thoc5Q8BKT7 683 aaKnown RBP12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 MydgfQ9CPT4 166 aa12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Cyp4f14Q9EP75 524 aa12.46□□□□□ -0.41
Trim56-201ENSMUST00000054384 Mocs3A2BDX3 460 aaKnown RBP12.46□□□□□ -0.42
Trim56-201ENSMUST00000054384 Sema4dO09126 861 aa12.46□□□□□ -0.42
Trim56-201ENSMUST00000054384 Scg3P47867 471 aa12.46□□□□□ -0.42
Trim56-201ENSMUST00000054384 Rcn1Q05186 325 aa12.46□□□□□ -0.42
Trim56-201ENSMUST00000054384 SpoplQ2M2N2 392 aa12.46□□□□□ -0.42
Trim56-201ENSMUST00000054384 Krt76Q3UV17 594 aaKnown RBP12.46□□□□□ -0.42
Trim56-201ENSMUST00000054384 Amhr2Q8K592 568 aa12.46□□□□□ -0.42
Trim56-201ENSMUST00000054384 Oas1dQ8VI95 361 aa12.46□□□□□ -0.42
Trim56-201ENSMUST00000054384 Nkd1Q99MH6 471 aa12.46□□□□□ -0.42
Trim56-201ENSMUST00000054384 Ttbk2Q3UVR3 1243 aa12.46□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms