RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Vamp7P70280 220 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Sh3bp2Q06649 559 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Upf3aQ3ULJ3 422 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Zfp658Q5PPQ4 887 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 NntQ61941 1086 aaKnown RBP9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Pan2Q8BGF7 1200 aaKnown RBP9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Tor4aQ8BH02 426 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 SowahaQ8BLS7 548 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Crlf2Q8CII9 359 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Brd3Q8K2F0 726 aaKnown RBP9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Gga1Q8R0H9 635 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Scrn2Q8VCA8 425 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Creb3l3Q91XE9 479 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Asic2Q925H0 512 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 MlklQ9D2Y4 472 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Gstt4Q9D4P7 240 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Dnajb4Q9D832 337 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Gtf3c6Q9D8P7 227 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Ipo7Q9EPL8 1038 aaKnown RBP9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Fgf22Q9ESS2 162 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Pdk2Q9JK42 407 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 CtsfQ9R013 462 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Slc26a3Q9WVC8 757 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Atg2aQ6P4T0 1914 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Dnah12Q3V0Q1 3086 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Igkv18-36A0A075B5M9 114 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Rap1gapA2ALS5 663 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Kcnu1O54982 1121 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 ZfxP17012 799 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Chp1P61022 195 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Cdh8P97291 799 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Flt3Q00342 1000 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Tekt4Q149S1 447 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Lrig2Q52KR2 1054 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 FancbQ5XJY6 703 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 PtprjQ64455 1238 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Frmd5Q6P5H6 517 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Kcnt1Q6ZPR4 1224 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Olfr538Q7TRT5 310 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Znf689Q8BKK5 500 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Zmym6Q8BS54 1249 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Pwp2Q8BU03 919 aaKnown RBP9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Pyhin1Q8BV49 420 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Rsl1d1Q8BVY0 452 aaKnown RBP9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Eif2b5Q8CHW4 717 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Cdk17Q8K0D0 523 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Ugt2b1Q8R084 529 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Q91Z58 1206 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 1700123K08RikQ9D991 295 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Homer2Q9QWW1 354 aa9.48□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Gm13276A0A087WR18 182 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Olfr391-psA0A0U1RNJ4 312 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Mindy4b-psA0A1W2P7H6 457 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Cyp2b13A6H6J2 491 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Ttc17E9PVB5 1198 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Gm11239E9Q5Z9 360 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Gm11237F2Z3W5 360 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Gm11238F2Z478 360 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Pbx2O35984 430 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Abcb1bP06795 1276 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 CebpzP53569 1052 aaKnown RBP9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Sox8Q04886 464 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Grm2Q14BI2 872 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Gm428Q3UTE2 360 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Hspa4Q61316 841 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 NrcamQ810U4 1256 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Depdc1bQ8BH88 529 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Aste1Q8BIR2 672 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Dnm3Q8BZ98 863 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Champ1Q8K327 802 aaKnown RBP9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Spata4Q8K3V1 295 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Zcchc14Q8VIG0 956 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Bzw2Q91VK1 419 aaKnown RBP9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Pcyox1Q9CQF9 505 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 GarsQ9CZD3 729 aaKnown RBP9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Rab11fip1Q9D620 645 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Scyl3Q9DBQ7 735 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Rab13Q9DD03 202 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Sertad2Q9JJG5 309 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 TriobpQ99KW3 2014 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Baz2aQ91YE5 1889 aaKnown RBP9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Zscan4-ps3A0A1B0GRH6 506 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Zscan4-ps2A0A1C7CYU6 506 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Gm28042B7ZCM9 1014 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 BC049352E9Q2Z6 85 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Olfr743L7N1Y2 311 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Krt13P08730 437 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Pax3P24610 479 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Adcy6Q01341 1165 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Muc3aQ3U5A2 218 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Frat2Q8K025 231 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Lmcd1Q8VEE1 365 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Rbm10Q99KG3 930 aaKnown RBP9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 CalcbQ99MP3 130 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Klhl40Q9D783 621 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 TheglQ9DA15 459 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Gtf2ird1Q9JI57 1104 aaKnown RBP9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Peg12Q9WVA7 283 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Gadd45gQ9Z111 159 aa9.47□□□□□ -0.89
Ccdc28a-201ENSMUST00000052648 Gys1Q9Z1E4 738 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 53.5 ms