RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Dnajc3Q91YW3 504 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 TrabdQ99JY4 376 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Abcf2Q99LE6 628 aaKnown RBP10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Olfr1354E9Q5G9 310 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Cacna2d1O08532 1103 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 PtenO08586 403 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Hcn2O88703 863 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Fam167bP17257 162 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 LmnaP48678 665 aaKnown RBP10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Ccdc138Q0VF22 680 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Q6DFW0 481 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Frmd5Q6P5H6 517 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Cwf19l2Q8BG79 887 aaKnown RBP10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Fbxo28Q8BIG4 368 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Pak5Q8C015 719 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Gpc3Q8CFZ4 579 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Thoc1Q8R3N6 657 aaKnown RBP10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Dact1Q8R4A3 778 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 HnmtQ91VF2 295 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Bcl2l12Q9D3J3 255 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Cyp2s1Q9DBX6 501 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Kank3Q9Z1P7 791 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Pnpla6Q3TRM4 1355 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Mrc1Q61830 1456 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Gm36210A0A1B0GS00 229 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Rufy4Q3TYX8 563 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Siglec10Q80ZE3 688 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Gpr180Q8BPS4 441 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Rmnd1Q8CI78 450 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Ankef1Q9D2J7 775 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Borcs6Q9D6W8 360 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Mrpl2Q9D773 306 aaKnown RBP10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 PodxlQ9R0M4 503 aa10.82□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Mocs3A2BDX3 460 aaKnown RBP10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Ifi206G3UZV2 921 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Pde9aO70628 534 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Klra1P20937 262 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Klra6Q60653 266 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Tll1Q62381 1013 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Sez6lQ6P1D5 963 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Atg4cQ811C2 458 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Prl7b1Q8CGZ9 251 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Homer3Q99JP6 356 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Bpifb9bA2AJD1 591 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Mup10A2BIN1 180 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Mup14A2CEK7 180 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Mup19A9C497 187 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Mup15A9R9W0 180 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Mup17B5X0G2 180 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Mup8E9PVW0 235 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Mup7E9QA79 235 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Mup6P02762 180 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 AlbP07724 608 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Mup1P11588 180 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Mup2P11589 180 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Rab6bP61294 208 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Bpifb9aQ80XI7 591 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Baiap2l2Q80Y61 522 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Gtf3c4Q8BMQ2 817 aaKnown RBP10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Ephb1Q8CBF3 984 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Zmynd10Q99ML0 440 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Golph3Q9CRA5 298 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 MajinQ9D992 256 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Camta1A2A891 1682 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 FancfE9Q5Z5 343 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Cdo1P60334 200 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 FdxrQ61578 494 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 SnrpaQ62189 287 aaKnown RBP10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Ntrk3Q6VNS1 825 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Pdk1Q8BFP9 434 aaKnown RBP10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Rhpn2Q8BWR8 686 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Ppp1r11Q8K1L5 131 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 PigoQ9JJI6 1093 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Pck1Q9Z2V4 622 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Adgra3Q7TT36 1310 aa10.81□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Rad51ap2G3UW63 976 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Psmc6P62334 389 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Fdxacb1Q3UY23 622 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Mettl25Q6NXH8 597 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Stkld1Q80YS9 662 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Q8BGN9 141 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Btnl9Q8BJE2 536 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 E4f1Q8CCE9 783 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Fcho1Q8K285 873 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Dqx1Q924H9 718 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Cdk9Q99J95 372 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Mtfr1lQ9CWE0 289 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Cnbd2Q9D5U8 673 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Stk4Q9JI11 487 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Eif2ak3Q9Z2B5 1114 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Rhox3fA2ANE1 215 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 EloblA6PWE0 161 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Kif6E9PX57 802 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Anxa5P48036 319 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Arpp19P56212 112 aaKnown RBP10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Rnf113a2Q14B01 337 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Rnf31Q924T7 1066 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Zfp846G3X996 541 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Sema6bO54951 886 aa10.8□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Psma2P49722 234 aa10.8□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms