RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Znf219Q6IQX8 726 aa24.44■■□□□ 1.5
Cln6-201ENSMUST00000034776 Vat1lQ80TB8 417 aa24.44■■□□□ 1.5
Cln6-201ENSMUST00000034776 Smc6Q924W5 1097 aa24.44■■□□□ 1.5
Cln6-201ENSMUST00000034776 Ddx47Q9CWX9 455 aaKnown RBP24.44■■□□□ 1.5
Cln6-201ENSMUST00000034776 Gm12394A2AKP6 982 aa24.43■■□□□ 1.5
Cln6-201ENSMUST00000034776 Nfx1B1AY10 1114 aaKnown RBP24.43■■□□□ 1.5
Cln6-201ENSMUST00000034776 Nacc1Q7TSZ8 514 aa24.43■■□□□ 1.5
Cln6-201ENSMUST00000034776 Trmt13Q8BYH3 481 aa24.43■■□□□ 1.5
Cln6-201ENSMUST00000034776 Olfr385Q8VGT1 312 aa24.43■■□□□ 1.5
Cln6-201ENSMUST00000034776 Caskin2Q8VHK1 1201 aa24.43■■□□□ 1.5
Cln6-201ENSMUST00000034776 Pcdhac2Q91Y09 1006 aa24.43■■□□□ 1.5
Cln6-201ENSMUST00000034776 Satl1Q9D5N8 744 aa24.43■■□□□ 1.5
Cln6-201ENSMUST00000034776 Drg2Q9QXB9 364 aaKnown RBP24.43■■□□□ 1.5
Cln6-201ENSMUST00000034776 Tnfrsf10bQ9QZM4 381 aa24.43■■□□□ 1.5
Cln6-201ENSMUST00000034776 Rap1gapA2ALS5 663 aa24.43■■□□□ 1.5
Cln6-201ENSMUST00000034776 Irs1P35569 1233 aa24.43■■□□□ 1.5
Cln6-201ENSMUST00000034776 Rbp3P49194 1234 aa24.43■■□□□ 1.5
Cln6-201ENSMUST00000034776 Cdh8P97291 799 aa24.43■■□□□ 1.5
Cln6-201ENSMUST00000034776 Trim21Q62191 470 aa24.43■■□□□ 1.5
Cln6-201ENSMUST00000034776 Retreg2Q6NS82 541 aa24.43■■□□□ 1.5
Cln6-201ENSMUST00000034776 Srrm3Q80WV7 648 aa24.43■■□□□ 1.5
Cln6-201ENSMUST00000034776 Fbxo33Q8VE08 562 aa24.43■■□□□ 1.5
Cln6-201ENSMUST00000034776 CmasQ99KK2 432 aaKnown RBP24.43■■□□□ 1.5
Cln6-201ENSMUST00000034776 Polr3eQ9CZT4 710 aa24.43■■□□□ 1.5
Cln6-201ENSMUST00000034776 PirQ9D711 290 aa24.43■■□□□ 1.5
Cln6-201ENSMUST00000034776 Tff2Q03404 129 aa24.42■■□□□ 1.5
Cln6-201ENSMUST00000034776 HelqQ2VPA6 1069 aa24.42■■□□□ 1.5
Cln6-201ENSMUST00000034776 Znf583Q3V080 568 aa24.42■■□□□ 1.5
Cln6-201ENSMUST00000034776 HarsQ61035 509 aa24.42■■□□□ 1.5
Cln6-201ENSMUST00000034776 Ntan1Q64311 310 aa24.42■■□□□ 1.5
Cln6-201ENSMUST00000034776 Gpc5Q8CAL5 572 aa24.42■■□□□ 1.5
Cln6-201ENSMUST00000034776 Btbd6Q8K2J9 488 aa24.42■■□□□ 1.5
Cln6-201ENSMUST00000034776 Gm44511A0A0N4SW10 223 aa24.41■■□□□ 1.5
Cln6-201ENSMUST00000034776 Gm8909G3UXE9 396 aa24.41■■□□□ 1.5
Cln6-201ENSMUST00000034776 Rpl7aP12970 266 aaKnown RBP24.41■■□□□ 1.5
Cln6-201ENSMUST00000034776 Klrb1bP27812 223 aa24.41■■□□□ 1.5
Cln6-201ENSMUST00000034776 Hoxb13P70321 286 aa24.41■■□□□ 1.5
Cln6-201ENSMUST00000034776 Smyd1P97443 490 aa24.41■■□□□ 1.5
Cln6-201ENSMUST00000034776 Asprv1Q09PK2 339 aa24.41■■□□□ 1.5
Cln6-201ENSMUST00000034776 Zbtb17Q60821 794 aa24.41■■□□□ 1.5
Cln6-201ENSMUST00000034776 PnocQ64387 187 aa24.41■■□□□ 1.5
Cln6-201ENSMUST00000034776 Chst7Q9EP78 484 aa24.41■■□□□ 1.5
Cln6-201ENSMUST00000034776 Cog1Q9Z160 980 aa24.41■■□□□ 1.5
Cln6-201ENSMUST00000034776 Sept3Q9Z1S5 350 aa24.41■■□□□ 1.5
Cln6-201ENSMUST00000034776 Scn1aA2APX8 2009 aa24.41■■□□□ 1.5
Cln6-201ENSMUST00000034776 SktA2AQ25 1946 aaKnown RBP24.41■■□□□ 1.5
Cln6-201ENSMUST00000034776 PtpreP49446 699 aa24.41■■□□□ 1.5
Cln6-201ENSMUST00000034776 Nr1d1Q3UV55 615 aa24.41■■□□□ 1.5
Cln6-201ENSMUST00000034776 Tspyl3Q3UYP3 334 aa24.41■■□□□ 1.5
Cln6-201ENSMUST00000034776 Samhd1Q60710 627 aa24.41■■□□□ 1.5
Cln6-201ENSMUST00000034776 Nlgn2Q69ZK9 836 aa24.41■■□□□ 1.5
Cln6-201ENSMUST00000034776 Foxo6Q70KY4 559 aa24.41■■□□□ 1.5
Cln6-201ENSMUST00000034776 Fbxo38Q8BMI0 1194 aa24.41■■□□□ 1.5
Cln6-201ENSMUST00000034776 Syt15Q8C6N3 418 aa24.41■■□□□ 1.5
Cln6-201ENSMUST00000034776 Kct2Q8K201 259 aa24.41■■□□□ 1.5
Cln6-201ENSMUST00000034776 Sh2b1Q91ZM2 756 aa24.41■■□□□ 1.5
Cln6-201ENSMUST00000034776 Alg1Q921Q3 482 aa24.41■■□□□ 1.5
Cln6-201ENSMUST00000034776 Tom1l1Q923U0 474 aa24.41■■□□□ 1.5
Cln6-201ENSMUST00000034776 Ddx56Q9D0R4 546 aaKnown RBP24.41■■□□□ 1.5
Cln6-201ENSMUST00000034776 Krt17Q9QWL7 433 aa24.41■■□□□ 1.5
Cln6-201ENSMUST00000034776 Dnajc12Q9R022 198 aa24.41■■□□□ 1.5
Cln6-201ENSMUST00000034776 Hsd17b14E9Q3D4 273 aa24.4■■□□□ 1.5
Cln6-201ENSMUST00000034776 Gm1661E9Q963 441 aa24.4■■□□□ 1.5
Cln6-201ENSMUST00000034776 Klhl33G3UW92 533 aa24.4■■□□□ 1.5
Cln6-201ENSMUST00000034776 Cyp27b1O35084 507 aa24.4■■□□□ 1.5
Cln6-201ENSMUST00000034776 Oaz1P54369 227 aa24.4■■□□□ 1.5
Cln6-201ENSMUST00000034776 Lhx5P61375 402 aa24.4■■□□□ 1.5
Cln6-201ENSMUST00000034776 Lrch2Q3UMG5 773 aa24.4■■□□□ 1.5
Cln6-201ENSMUST00000034776 Olfr23Q7TRX4 325 aa24.4■■□□□ 1.5
Cln6-201ENSMUST00000034776 Dydc1Q9D9T0 175 aa24.4■■□□□ 1.5
Cln6-201ENSMUST00000034776 Cpb2Q9JHH6 422 aa24.4■■□□□ 1.5
Cln6-201ENSMUST00000034776 PollQ9QXE2 573 aaKnown RBP24.4■■□□□ 1.5
Cln6-201ENSMUST00000034776 EcsitQ9QZH6 435 aa24.4■■□□□ 1.5
Cln6-201ENSMUST00000034776 Rtel1Q0VGM9 1203 aa24.4■■□□□ 1.5
Cln6-201ENSMUST00000034776 Gucy2gQ6TL19 1100 aa24.4■■□□□ 1.5
Cln6-201ENSMUST00000034776 PrcpQ7TMR0 491 aa24.4■■□□□ 1.5
Cln6-201ENSMUST00000034776 Rhot1Q8BG51 631 aa24.4■■□□□ 1.5
Cln6-201ENSMUST00000034776 Trim6Q8BGE7 488 aa24.4■■□□□ 1.5
Cln6-201ENSMUST00000034776 Mill1Q8HWE7 395 aa24.4■■□□□ 1.5
Cln6-201ENSMUST00000034776 CarfQ8VHI4 689 aa24.4■■□□□ 1.5
Cln6-201ENSMUST00000034776 CtsqQ91ZF4 343 aa24.4■■□□□ 1.5
Cln6-201ENSMUST00000034776 Tmem174Q9DCX7 243 aa24.4■■□□□ 1.5
Cln6-201ENSMUST00000034776 Pold3Q9EQ28 462 aa24.4■■□□□ 1.5
Cln6-201ENSMUST00000034776 Tmod3Q9JHJ0 352 aa24.4■■□□□ 1.5
Cln6-201ENSMUST00000034776 CtsfQ9R013 462 aa24.4■■□□□ 1.5
Cln6-201ENSMUST00000034776 Map7d2A2AG50 781 aa24.39■■□□□ 1.49
Cln6-201ENSMUST00000034776 Rasal2E9PW37 1286 aa24.39■■□□□ 1.49
Cln6-201ENSMUST00000034776 PtprcP06800 1291 aa24.39■■□□□ 1.49
Cln6-201ENSMUST00000034776 Pi4k2aQ2TBE6 479 aa24.39■■□□□ 1.49
Cln6-201ENSMUST00000034776 Dab2ipQ3UHC7 1189 aa24.39■■□□□ 1.49
Cln6-201ENSMUST00000034776 Ttc9Q3V038 219 aa24.39■■□□□ 1.49
Cln6-201ENSMUST00000034776 Mfhas1Q3V1N1 1048 aa24.39■■□□□ 1.49
Cln6-201ENSMUST00000034776 Jade3Q6IE82 823 aa24.39■■□□□ 1.49
Cln6-201ENSMUST00000034776 Camta2Q80Y50 1208 aa24.39■■□□□ 1.49
Cln6-201ENSMUST00000034776 Pknox2Q8BG99 474 aa24.39■■□□□ 1.49
Cln6-201ENSMUST00000034776 Fam49aQ8BHZ0 323 aa24.39■■□□□ 1.49
Cln6-201ENSMUST00000034776 Mical2Q8BML1 960 aa24.39■■□□□ 1.49
Cln6-201ENSMUST00000034776 Cul2Q9D4H8 745 aa24.39■■□□□ 1.49
Cln6-201ENSMUST00000034776 DpysQ9EQF5 519 aa24.39■■□□□ 1.49
Cln6-201ENSMUST00000034776 Mbtps1Q9WTZ2 1052 aa24.39■■□□□ 1.49
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms