RNA–Protein interactions for RNA: YPR001W

CIT3, Transcript of Dual specificity mitochondrial citrate and methylcitrate synthase, yeastyeast

Gene CIT3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT3YPR001W YEN1P40028 759 aa8.28□□□□□ -1.08
CIT3YPR001W HUL5P53119 910 aa8.28□□□□□ -1.08
CIT3YPR001W PDI1P17967 522 aaKnown RBP8.27□□□□□ -1.09
CIT3YPR001W GUT2P32191 649 aa8.27□□□□□ -1.09
CIT3YPR001W ECM16Q04217 1267 aaKnown RBP8.27□□□□□ -1.09
CIT3YPR001W TEC1P18412 486 aa8.26□□□□□ -1.09
CIT3YPR001W GAL11P19659 1081 aa8.26□□□□□ -1.09
CIT3YPR001W VMA4P22203 233 aaKnown RBP8.26□□□□□ -1.09
CIT3YPR001W SEC6P32844 805 aa8.26□□□□□ -1.09
CIT3YPR001W APL6P46682 809 aa8.26□□□□□ -1.09
CIT3YPR001W TMA64Q04600 565 aaKnown RBP8.26□□□□□ -1.09
CIT3YPR001W GRX1P25373 110 aaKnown RBP8.26□□□□□ -1.09
CIT3YPR001W ENP1P38333 483 aaKnown RBP8.26□□□□□ -1.09
CIT3YPR001W TAT2P38967 592 aa8.26□□□□□ -1.09
CIT3YPR001W BOI2P39969 1040 aa8.26□□□□□ -1.09
CIT3YPR001W CEF1Q03654 590 aaPredicted RBP8.26□□□□□ -1.09
CIT3YPR001W BOI1P38041 980 aaKnown RBP8.25□□□□□ -1.09
CIT3YPR001W TY4A-JP47023 414 aa8.25□□□□□ -1.09
CIT3YPR001W BRE1Q07457 700 aaKnown RBP8.25□□□□□ -1.09
CIT3YPR001W PPM2Q08282 695 aa8.25□□□□□ -1.09
CIT3YPR001W PHO8P11491 566 aa8.24□□□□□ -1.09
CIT3YPR001W DAN4P47179 1161 aa8.24□□□□□ -1.09
CIT3YPR001W HTA1P04911 132 aaKnown RBP8.23□□□□□ -1.09
CIT3YPR001W HTA2P04912 132 aa8.23□□□□□ -1.09
CIT3YPR001W KIP3P53086 805 aaKnown RBP8.23□□□□□ -1.09
CIT3YPR001W YGR122WP53272 402 aa8.23□□□□□ -1.09
CIT3YPR001W CYC8P14922 966 aa8.22□□□□□ -1.09
CIT3YPR001W RPA135P22138 1203 aaKnown RBP8.22□□□□□ -1.09
CIT3YPR001W PWP2P25635 923 aaKnown RBP8.22□□□□□ -1.09
CIT3YPR001W SUV3P32580 737 aa8.22□□□□□ -1.09
CIT3YPR001W TIM23P32897 222 aa8.22□□□□□ -1.09
CIT3YPR001W VPS35P34110 944 aa8.22□□□□□ -1.09
CIT3YPR001W CRP1P38845 465 aaKnown RBP8.22□□□□□ -1.09
CIT3YPR001W ITC1P53125 1264 aa8.22□□□□□ -1.09
CIT3YPR001W UFD2P54860 961 aa8.22□□□□□ -1.09
CIT3YPR001W YPR084WQ06821 456 aa8.22□□□□□ -1.09
CIT3YPR001W YDL206WQ12424 762 aa8.22□□□□□ -1.09
CIT3YPR001W SRM1P21827 482 aa8.21□□□□□ -1.09
CIT3YPR001W BUD31P25337 157 aaPredicted RBP8.21□□□□□ -1.09
CIT3YPR001W MRC1P25588 1096 aa8.21□□□□□ -1.09
CIT3YPR001W VPS24P36095 224 aaKnown RBP8.21□□□□□ -1.09
CIT3YPR001W ERP2P39704 215 aa8.21□□□□□ -1.09
CIT3YPR001W FIG4P42837 879 aa8.21□□□□□ -1.09
CIT3YPR001W YFL034WP43564 1073 aa8.21□□□□□ -1.09
CIT3YPR001W TUB4P53378 473 aa8.21□□□□□ -1.09
CIT3YPR001W DNM1P54861 757 aa8.21□□□□□ -1.09
CIT3YPR001W YLR125WQ12138 136 aa8.21□□□□□ -1.09
CIT3YPR001W YRR1Q12172 810 aa8.21□□□□□ -1.09
CIT3YPR001W KEX2P13134 814 aa8.2□□□□□ -1.1
CIT3YPR001W RAD4P14736 754 aa8.2□□□□□ -1.1
CIT3YPR001W CWH41P53008 833 aa8.2□□□□□ -1.1
CIT3YPR001W CHZ1P40019 153 aaPredicted RBP8.19□□□□□ -1.1
CIT3YPR001W TIM54P47045 478 aa8.19□□□□□ -1.1
CIT3YPR001W NAN1Q02931 896 aaKnown RBP8.19□□□□□ -1.1
CIT3YPR001W OXR1Q08952 273 aa8.19□□□□□ -1.1
CIT3YPR001W MNN4P36044 1178 aa8.19□□□□□ -1.1
CIT3YPR001W FUI1P38196 639 aa8.19□□□□□ -1.1
CIT3YPR001W CBC2Q08920 208 aaKnown RBP RIP-Chip data8.19□□□□□ -1.1not detected
CIT3YPR001W NKP1Q12493 238 aa8.19□□□□□ -1.1
CIT3YPR001W UBP1P25037 809 aa8.18□□□□□ -1.1
CIT3YPR001W PAF1P38351 445 aa8.18□□□□□ -1.1
CIT3YPR001W AIM21P40563 679 aa8.18□□□□□ -1.1
CIT3YPR001W GDE1Q02979 1223 aa8.18□□□□□ -1.1
CIT3YPR001W ERF2Q06551 359 aa8.18□□□□□ -1.1
CIT3YPR001W RAD2P07276 1031 aa8.17□□□□□ -1.1
CIT3YPR001W THI4P32318 326 aa8.17□□□□□ -1.1
CIT3YPR001W AIM9P40053 627 aaKnown RBP8.17□□□□□ -1.1
CIT3YPR001W SAM37P50110 327 aa8.17□□□□□ -1.1
CIT3YPR001W FOL1P53848 824 aa8.17□□□□□ -1.1
CIT3YPR001W TDA5Q06417 326 aaKnown RBP8.17□□□□□ -1.1
CIT3YPR001W APC11Q12157 165 aa8.17□□□□□ -1.1
CIT3YPR001W THS1P04801 734 aaKnown RBP8.16□□□□□ -1.1
CIT3YPR001W DPB3P27344 201 aa8.16□□□□□ -1.1
CIT3YPR001W RPA14P50106 137 aa8.16□□□□□ -1.1
CIT3YPR001W FOX2Q02207 900 aaKnown RBP8.16□□□□□ -1.1
CIT3YPR001W NOP14Q99207 810 aaKnown RBP8.16□□□□□ -1.1
CIT3YPR001W TRX2P22803 104 aaKnown RBP8.15□□□□□ -1.1
CIT3YPR001W RAD27P26793 382 aa8.15□□□□□ -1.1
CIT3YPR001W NOC2P39744 710 aaKnown RBP8.15□□□□□ -1.1
CIT3YPR001W VMS1Q04311 632 aaKnown RBP8.15□□□□□ -1.1
CIT3YPR001W RPB10P22139 70 aa8.14□□□□□ -1.11
CIT3YPR001W MPE1P35728 441 aaKnown RBP8.14□□□□□ -1.11
CIT3YPR001W FAA4P47912 694 aaKnown RBP8.14□□□□□ -1.11
CIT3YPR001W CDC55Q00362 526 aa8.14□□□□□ -1.11
CIT3YPR001W GIR2Q03768 265 aaPredicted RBP8.14□□□□□ -1.11
CIT3YPR001W BDS1Q08347 646 aa8.14□□□□□ -1.11
CIT3YPR001W PRI2P20457 528 aa8.13□□□□□ -1.11
CIT3YPR001W ISC10P32645 267 aa8.13□□□□□ -1.11
CIT3YPR001W CIC1P38779 376 aaKnown RBP8.13□□□□□ -1.11
CIT3YPR001W HAL5P38970 855 aaKnown RBP8.13□□□□□ -1.11
CIT3YPR001W SPF1P39986 1215 aaKnown RBP8.13□□□□□ -1.11
CIT3YPR001W NGR1P32831 672 aaKnown RBP8.13□□□□□ -1.11
CIT3YPR001W NTH2P35172 780 aa8.13□□□□□ -1.11
CIT3YPR001W YBR197CP38306 217 aa8.13□□□□□ -1.11
CIT3YPR001W YHR020WP38708 688 aaKnown RBP8.13□□□□□ -1.11
CIT3YPR001W TIF4632P39936 914 aaKnown RBP8.13□□□□□ -1.11
CIT3YPR001W VPS27P40343 622 aaKnown RBP8.13□□□□□ -1.11
CIT3YPR001W PEX8P53248 589 aa8.13□□□□□ -1.11
CIT3YPR001W YNR029CP53729 429 aaKnown RBP8.13□□□□□ -1.11
CIT3YPR001W YNL011CP53980 444 aa8.13□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 96.5 ms