RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W APP1P53933 587 aa5.26□□□□□ -1.57
VPS27YNR006W MIP1P15801 1254 aa5.26□□□□□ -1.57
VPS27YNR006W SYH1Q02875 849 aaKnown RBP5.26□□□□□ -1.57
VPS27YNR006W FRK1Q03002 865 aaPredicted RBP5.26□□□□□ -1.57
VPS27YNR006W PUF6Q04373 656 aaKnown RBP5.26□□□□□ -1.57
VPS27YNR006W KAR5Q04746 504 aa5.26□□□□□ -1.57
VPS27YNR006W HDA3Q06623 655 aa5.26□□□□□ -1.57
VPS27YNR006W GAS4Q08271 471 aa5.26□□□□□ -1.57
VPS27YNR006W SEC8P32855 1065 aa5.25□□□□□ -1.57
VPS27YNR006W GRS1P38088 690 aaKnown RBP5.25□□□□□ -1.57
VPS27YNR006W OYE2Q03558 400 aaKnown RBP5.25□□□□□ -1.57
VPS27YNR006W AIM9P40053 627 aaKnown RBP5.24□□□□□ -1.57
VPS27YNR006W DPS1P04802 557 aaKnown RBP5.23□□□□□ -1.57
VPS27YNR006W YFL034WP43564 1073 aa5.23□□□□□ -1.57
VPS27YNR006W RNH70P53331 553 aa5.23□□□□□ -1.57
VPS27YNR006W YOL098CQ12496 1037 aa5.23□□□□□ -1.57
VPS27YNR006W NUG1P40010 520 aaKnown RBP5.22□□□□□ -1.57
VPS27YNR006W YJR107WP47145 328 aa5.22□□□□□ -1.57
VPS27YNR006W ISU1Q03020 165 aa5.22□□□□□ -1.57
VPS27YNR006W FBP26P32604 452 aa5.22□□□□□ -1.57
VPS27YNR006W MRT4P33201 236 aaKnown RBP5.22□□□□□ -1.57
VPS27YNR006W NTH2P35172 780 aa5.22□□□□□ -1.57
VPS27YNR006W BOL3P39724 118 aa5.22□□□□□ -1.57
VPS27YNR006W YJR008WP47085 338 aa5.22□□□□□ -1.57
VPS27YNR006W PNP1Q05788 311 aa5.22□□□□□ -1.57
VPS27YNR006W JIP5Q06214 492 aaPredicted RBP5.22□□□□□ -1.57
VPS27YNR006W SPT2P06843 333 aaPredicted RBP5.21□□□□□ -1.58
VPS27YNR006W SWE1P32944 819 aa5.21□□□□□ -1.58
VPS27YNR006W ATG1P53104 897 aa5.21□□□□□ -1.58
VPS27YNR006W PUN1Q06991 263 aa5.21□□□□□ -1.58
VPS27YNR006W SRS2P12954 1174 aa5.2□□□□□ -1.58
VPS27YNR006W VAN1P23642 535 aa5.2□□□□□ -1.58
VPS27YNR006W MKS1P34072 584 aa5.2□□□□□ -1.58
VPS27YNR006W RTS3P53289 263 aa5.2□□□□□ -1.58
VPS27YNR006W NUT2Q06213 157 aa5.2□□□□□ -1.58
VPS27YNR006W UBP1P25037 809 aa5.2□□□□□ -1.58
VPS27YNR006W SUV3P32580 737 aa5.2□□□□□ -1.58
VPS27YNR006W MET1P36150 593 aa5.2□□□□□ -1.58
VPS27YNR006W THI12P42883 340 aa5.2□□□□□ -1.58
VPS27YNR006W THI5P43534 340 aa5.2□□□□□ -1.58
VPS27YNR006W THI11P47183 340 aa5.2□□□□□ -1.58
VPS27YNR006W THI13Q07748 340 aa5.2□□□□□ -1.58
VPS27YNR006W FRT1Q99332 602 aa5.2□□□□□ -1.58
VPS27YNR006W SWI5P08153 709 aa5.19□□□□□ -1.58
VPS27YNR006W RPS6AP0CX37 236 aaKnown RBP5.19□□□□□ -1.58
VPS27YNR006W RPS6BP0CX38 236 aaPredicted RBP5.19□□□□□ -1.58
VPS27YNR006W MET4P32389 672 aa5.19□□□□□ -1.58
VPS27YNR006W UTR2P32623 467 aa5.19□□□□□ -1.58
VPS27YNR006W YBL086CP38177 466 aa5.19□□□□□ -1.58
VPS27YNR006W TRS33Q99394 268 aa5.19□□□□□ -1.58
VPS27YNR006W STE6P12866 1290 aa5.18□□□□□ -1.58
VPS27YNR006W AMS1P22855 1083 aa5.18□□□□□ -1.58
VPS27YNR006W IOC3P43596 787 aa5.18□□□□□ -1.58
VPS27YNR006W ALD3P54114 506 aa5.18□□□□□ -1.58
VPS27YNR006W HED1Q03937 162 aa5.18□□□□□ -1.58
VPS27YNR006W URN1Q06525 465 aaKnown RBP5.18□□□□□ -1.58
VPS27YNR006W CYT1P07143 309 aa5.17□□□□□ -1.58
VPS27YNR006W FYV10P40492 516 aa5.17□□□□□ -1.58
VPS27YNR006W MNL2Q12205 849 aa5.17□□□□□ -1.58
VPS27YNR006W CIT2P08679 460 aa5.17□□□□□ -1.58
VPS27YNR006W NGR1P32831 672 aaKnown RBP5.17□□□□□ -1.58
VPS27YNR006W VAC8P39968 578 aa5.17□□□□□ -1.58
VPS27YNR006W CLA4P48562 842 aa5.17□□□□□ -1.58
VPS27YNR006W DFG5Q05031 458 aa5.17□□□□□ -1.58
VPS27YNR006W UBX5Q06682 500 aa5.17□□□□□ -1.58
VPS27YNR006W MGE1P38523 228 aa5.16□□□□□ -1.58
VPS27YNR006W WTM2Q12206 467 aa5.16□□□□□ -1.58
VPS27YNR006W FUR4P05316 633 aaKnown RBP5.15□□□□□ -1.58
VPS27YNR006W DAT1P13483 248 aaKnown RBP5.15□□□□□ -1.58
VPS27YNR006W QDR1P40475 563 aa5.15□□□□□ -1.59
VPS27YNR006W ACF4P47129 309 aa5.15□□□□□ -1.59
VPS27YNR006W ALD6P54115 500 aaKnown RBP5.15□□□□□ -1.59
VPS27YNR006W MET32Q12041 191 aa5.15□□□□□ -1.59
VPS27YNR006W RAS1P01119 309 aa5.14□□□□□ -1.59
VPS27YNR006W PPG1P32838 368 aa5.14□□□□□ -1.59
VPS27YNR006W TBS1P38114 1094 aa5.14□□□□□ -1.59
VPS27YNR006W ALG12P53730 551 aa5.14□□□□□ -1.59
VPS27YNR006W BDS1Q08347 646 aa5.14□□□□□ -1.59
VPS27YNR006W CWH41P53008 833 aa5.13□□□□□ -1.59
VPS27YNR006W LSO1Q3E827 93 aa5.13□□□□□ -1.59
VPS27YNR006W SRP40P32583 406 aaPredicted RBP5.13□□□□□ -1.59
VPS27YNR006W TOM20P35180 183 aa5.13□□□□□ -1.59
VPS27YNR006W BOI1P38041 980 aaKnown RBP5.13□□□□□ -1.59
VPS27YNR006W YBR197CP38306 217 aa5.13□□□□□ -1.59
VPS27YNR006W GLO3P38682 493 aaKnown RBP5.13□□□□□ -1.59
VPS27YNR006W FPR3P38911 411 aaKnown RBP5.13□□□□□ -1.59
VPS27YNR006W VPS16Q03308 798 aa5.13□□□□□ -1.59
VPS27YNR006W YPQ2Q06328 317 aa5.13□□□□□ -1.59
VPS27YNR006W RRP14P36080 434 aaKnown RBP5.12□□□□□ -1.59
VPS27YNR006W CAB1Q04430 367 aa5.12□□□□□ -1.59
VPS27YNR006W RPP2BP02400 110 aaKnown RBP5.11□□□□□ -1.59
VPS27YNR006W TSR4P25040 408 aa5.11□□□□□ -1.59
VPS27YNR006W MCM2P29469 868 aa5.11□□□□□ -1.59
VPS27YNR006W YKL091CP33324 310 aaKnown RBP5.11□□□□□ -1.59
VPS27YNR006W UTP7P40055 554 aaKnown RBP5.11□□□□□ -1.59
VPS27YNR006W GPI13Q07830 1017 aa5.11□□□□□ -1.59
VPS27YNR006W SSF2Q12153 453 aaPredicted RBP5.11□□□□□ -1.59
VPS27YNR006W AIR1P40507 360 aaKnown RBP5.11□□□□□ -1.59
VPS27YNR006W BUD6P41697 788 aa5.11□□□□□ -1.59
VPS27YNR006W SPR28Q04921 423 aa5.11□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms