RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W NSE3Q05541 303 aa5.73□□□□□ -1.49
CBF5YLR175W ATG13Q06628 738 aa5.73□□□□□ -1.49
CBF5YLR175W SAM3Q08986 587 aa5.73□□□□□ -1.49
CBF5YLR175W UBP14P38237 781 aaKnown RBP5.72□□□□□ -1.49
CBF5YLR175W LAM6Q08001 693 aa5.72□□□□□ -1.49
CBF5YLR175W VHR2P40041 505 aa5.71□□□□□ -1.49
CBF5YLR175W RPN11P43588 306 aaKnown RBP5.71□□□□□ -1.49
CBF5YLR175W YDR090CQ03193 310 aa5.71□□□□□ -1.49
CBF5YLR175W GRX1P25373 110 aaKnown RBP5.71□□□□□ -1.5
CBF5YLR175W PRP40P33203 583 aaKnown RBP5.71□□□□□ -1.5
CBF5YLR175W RRT14P40470 206 aa5.71□□□□□ -1.5
CBF5YLR175W YJL181WP46987 611 aa5.71□□□□□ -1.5
CBF5YLR175W YBP2P53169 641 aa5.71□□□□□ -1.5
CBF5YLR175W BMS1Q08965 1183 aaKnown RBP5.71□□□□□ -1.5
CBF5YLR175W GYP5Q12344 894 aa5.71□□□□□ -1.5
CBF5YLR175W UBP1P25037 809 aa5.7□□□□□ -1.5
CBF5YLR175W ATF2P53296 535 aa5.7□□□□□ -1.5
CBF5YLR175W YGR273CP53329 174 aa5.7□□□□□ -1.5
CBF5YLR175W RIM15P43565 1770 aa5.69□□□□□ -1.5
CBF5YLR175W COQ4O13525 335 aa5.69□□□□□ -1.5
CBF5YLR175W NPR2P39923 615 aa5.69□□□□□ -1.5
CBF5YLR175W SRT1Q03175 343 aa5.69□□□□□ -1.5
CBF5YLR175W RMT2Q03305 412 aa5.69□□□□□ -1.5
CBF5YLR175W YLR326WQ06170 240 aaKnown RBP5.69□□□□□ -1.5
CBF5YLR175W RAD4P14736 754 aa5.68□□□□□ -1.5
CBF5YLR175W KIC1P38692 1080 aa5.68□□□□□ -1.5
CBF5YLR175W GTT3P39996 337 aa5.68□□□□□ -1.5
CBF5YLR175W MDG1P53885 366 aa5.68□□□□□ -1.5
CBF5YLR175W YOL057WQ08225 711 aa5.68□□□□□ -1.5
CBF5YLR175W MSB4Q12317 492 aa5.68□□□□□ -1.5
CBF5YLR175W YIL092WP40497 633 aa5.67□□□□□ -1.5
CBF5YLR175W BUD27P43573 796 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
CBF5YLR175W HGH1P48362 394 aaKnown RBP5.67□□□□□ -1.5
CBF5YLR175W ALE1Q08548 619 aa5.67□□□□□ -1.5
CBF5YLR175W TUM1Q08686 304 aaKnown RBP5.67□□□□□ -1.5
CBF5YLR175W RAD2P07276 1031 aa5.66□□□□□ -1.5
CBF5YLR175W SSP2Q08646 371 aa5.66□□□□□ -1.5
CBF5YLR175W PHM7Q12252 991 aa5.66□□□□□ -1.5
CBF5YLR175W SOL3P38858 249 aa5.65□□□□□ -1.5
CBF5YLR175W RLF2Q12495 606 aa5.65□□□□□ -1.5
CBF5YLR175W KEX1P09620 729 aa5.64□□□□□ -1.51
CBF5YLR175W YBR287WP38355 427 aa5.64□□□□□ -1.51
CBF5YLR175W YJR008WP47085 338 aa5.64□□□□□ -1.51
CBF5YLR175W DNM1P54861 757 aa5.64□□□□□ -1.51
CBF5YLR175W YDR306CQ06640 478 aa5.64□□□□□ -1.51
CBF5YLR175W RPS19AP07280 144 aaKnown RBP5.64□□□□□ -1.51
CBF5YLR175W RPS19BP07281 144 aaPredicted RBP5.64□□□□□ -1.51
CBF5YLR175W RAD54P32863 898 aa5.64□□□□□ -1.51
CBF5YLR175W PCS60P38137 543 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
CBF5YLR175W GUA1P38625 525 aaKnown RBP5.64□□□□□ -1.51
CBF5YLR175W YPP1P46951 817 aa5.64□□□□□ -1.51
CBF5YLR175W LYS4P49367 693 aaPredicted RBP5.64□□□□□ -1.51
CBF5YLR175W DAL5P15365 543 aa5.63□□□□□ -1.51
CBF5YLR175W PSE1P32337 1089 aaKnown RBP5.63□□□□□ -1.51
CBF5YLR175W DCW1P36091 449 aa5.63□□□□□ -1.51
CBF5YLR175W CST6P40535 587 aa5.63□□□□□ -1.51
CBF5YLR175W YOL036WQ08206 761 aa5.63□□□□□ -1.51
CBF5YLR175W MRP7P12687 371 aa5.62□□□□□ -1.51
CBF5YLR175W ARG8P18544 423 aa5.62□□□□□ -1.51
CBF5YLR175W ALD2P47771 506 aa5.62□□□□□ -1.51
CBF5YLR175W CTH1P47976 325 aa5.62□□□□□ -1.51
CBF5YLR175W UTP22P53254 1237 aaPredicted RBP5.62□□□□□ -1.51
CBF5YLR175W YPR204WQ08995 1032 aa5.62□□□□□ -1.51
CBF5YLR175W NYV1Q12255 253 aa5.62□□□□□ -1.51
CBF5YLR175W FUN12P39730 1002 aaKnown RBP5.61□□□□□ -1.51
CBF5YLR175W TEA1P47988 759 aa5.61□□□□□ -1.51
CBF5YLR175W ZDS2P54786 942 aa5.61□□□□□ -1.51
CBF5YLR175W BUG1Q12191 341 aa5.61□□□□□ -1.51
CBF5YLR175W UTP10P42945 1769 aaKnown RBP5.61□□□□□ -1.51
CBF5YLR175W SWI1P09547 1314 aa5.61□□□□□ -1.51
CBF5YLR175W HTA1P04911 132 aaKnown RBP5.6□□□□□ -1.51
CBF5YLR175W HTA2P04912 132 aa5.6□□□□□ -1.51
CBF5YLR175W YBL086CP38177 466 aa5.6□□□□□ -1.51
CBF5YLR175W FPR3P38911 411 aaKnown RBP5.6□□□□□ -1.51
CBF5YLR175W SET4P42948 560 aa5.6□□□□□ -1.51
CBF5YLR175W HPC2Q01448 625 aa5.6□□□□□ -1.51
CBF5YLR175W CSI1Q04368 295 aa5.6□□□□□ -1.51
CBF5YLR175W TRP5P00931 707 aaKnown RBP5.59□□□□□ -1.51
CBF5YLR175W SSA2P10592 639 aaKnown RBP5.59□□□□□ -1.51
CBF5YLR175W UGA2P38067 497 aa5.59□□□□□ -1.51
CBF5YLR175W POL32P47110 350 aa5.59□□□□□ -1.51
CBF5YLR175W NOP8Q08287 484 aaPredicted RBP5.59□□□□□ -1.51
CBF5YLR175W AI4P03878 556 aa5.58□□□□□ -1.52
CBF5YLR175W MPH3P0CE00 602 aa5.58□□□□□ -1.52
CBF5YLR175W APL2P36000 726 aaPredicted RBP5.58□□□□□ -1.52
CBF5YLR175W NUP133P36161 1157 aa5.58□□□□□ -1.52
CBF5YLR175W TOS1P38288 455 aa5.58□□□□□ -1.52
CBF5YLR175W BOI2P39969 1040 aa5.58□□□□□ -1.52
CBF5YLR175W ALD3P54114 506 aa5.58□□□□□ -1.52
CBF5YLR175W VPS64Q03944 604 aa5.58□□□□□ -1.52
CBF5YLR175W SSK22P25390 1331 aaPredicted RBP5.58□□□□□ -1.52
CBF5YLR175W RAD24P32641 659 aa5.58□□□□□ -1.52
CBF5YLR175W SER1P33330 395 aaKnown RBP5.58□□□□□ -1.52
CBF5YLR175W YNG2P38806 282 aaKnown RBP5.58□□□□□ -1.52
CBF5YLR175W YGL082WP53155 381 aa5.58□□□□□ -1.52
CBF5YLR175W YGR122WP53272 402 aa5.58□□□□□ -1.52
CBF5YLR175W PUF6Q04373 656 aaKnown RBP5.58□□□□□ -1.52
CBF5YLR175W GCD7P32502 381 aaPredicted RBP5.57□□□□□ -1.52
CBF5YLR175W ORC6P38826 435 aa5.57□□□□□ -1.52
CBF5YLR175W RAT1Q02792 1006 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms