RNA–Protein interactions for RNA: YGR278W

CWC22, Transcript of Spliceosome-associated protein that is required for pre-mRNA splicing, yeast

Gene CWC22, Length 1,734 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CWC22	YGR278W	MRF1	P30775	413 aa	Predicted RBP	4.2	□□□□□ -1.74
CWC22	YGR278W	UTR2	P32623	467 aa		4.2	□□□□□ -1.74
CWC22	YGR278W	MRT4	P33201	236 aa	Known RBP	4.2	□□□□□ -1.74
CWC22	YGR278W	KTR2	P33550	425 aa		4.2	□□□□□ -1.74
CWC22	YGR278W	GLO3	P38682	493 aa	Known RBP	4.2	□□□□□ -1.74
CWC22	YGR278W	QDR1	P40475	563 aa		4.2	□□□□□ -1.74
CWC22	YGR278W	ALD2	P47771	506 aa		4.2	□□□□□ -1.74
CWC22	YGR278W	RRP15	Q06511	250 aa	Predicted RBP	4.2	□□□□□ -1.74
CWC22	YGR278W	MSC6	Q08818	692 aa	Known RBP	4.2	□□□□□ -1.74
CWC22	YGR278W	YBL086C	P38177	466 aa		4.19	□□□□□ -1.74
CWC22	YGR278W	ATG1	P53104	897 aa		4.19	□□□□□ -1.74
CWC22	YGR278W	CAB1	Q04430	367 aa		4.19	□□□□□ -1.74
CWC22	YGR278W	NUT2	Q06213	157 aa		4.19	□□□□□ -1.74
CWC22	YGR278W	WTM2	Q12206	467 aa		4.19	□□□□□ -1.74
CWC22	YGR278W	RAS1	P01119	309 aa		4.18	□□□□□ -1.74
CWC22	YGR278W	RPB10	P22139	70 aa		4.18	□□□□□ -1.74
CWC22	YGR278W	HEM3	P28789	327 aa		4.18	□□□□□ -1.74
CWC22	YGR278W	NGR1	P32831	672 aa	Known RBP	4.18	□□□□□ -1.74
CWC22	YGR278W	YBR197C	P38306	217 aa		4.18	□□□□□ -1.74
CWC22	YGR278W	STM1	P39015	273 aa	Known RBP	4.18	□□□□□ -1.74
CWC22	YGR278W	MET32	Q12041	191 aa		4.18	□□□□□ -1.74
CWC22	YGR278W	STE6	P12866	1290 aa		4.18	□□□□□ -1.74
CWC22	YGR278W	UTP7	P40055	554 aa	Known RBP	4.18	□□□□□ -1.74
CWC22	YGR278W	AIR1	P40507	360 aa	Known RBP	4.18	□□□□□ -1.74
CWC22	YGR278W	YFL034W	P43564	1073 aa		4.18	□□□□□ -1.74
CWC22	YGR278W	FOX2	Q02207	900 aa	Known RBP	4.18	□□□□□ -1.74
CWC22	YGR278W	YPQ2	Q06328	317 aa		4.18	□□□□□ -1.74
CWC22	YGR278W	GPI13	Q07830	1017 aa		4.18	□□□□□ -1.74
CWC22	YGR278W	LSO1	Q3E827	93 aa		4.18	□□□□□ -1.74
CWC22	YGR278W	TRS33	Q99394	268 aa		4.18	□□□□□ -1.74
CWC22	YGR278W	FUR4	P05316	633 aa	Known RBP	4.17	□□□□□ -1.74
CWC22	YGR278W	DAT1	P13483	248 aa	Known RBP	4.17	□□□□□ -1.74
CWC22	YGR278W	ISC10	P32645	267 aa		4.17	□□□□□ -1.74
CWC22	YGR278W	PAM1	P37304	830 aa	Known RBP	4.17	□□□□□ -1.74
CWC22	YGR278W	HXT5	P38695	592 aa		4.16	□□□□□ -1.74
CWC22	YGR278W	YNL165W	P53891	406 aa		4.16	□□□□□ -1.74
CWC22	YGR278W	MET4	P32389	672 aa		4.15	□□□□□ -1.74
CWC22	YGR278W	AMS1	P22855	1083 aa		4.15	□□□□□ -1.75
CWC22	YGR278W	HED1	Q03937	162 aa		4.15	□□□□□ -1.75
CWC22	YGR278W	PPX1	P38698	397 aa		4.14	□□□□□ -1.75
CWC22	YGR278W	POL32	P47110	350 aa		4.14	□□□□□ -1.75
CWC22	YGR278W	ACF4	P47129	309 aa		4.14	□□□□□ -1.75
CWC22	YGR278W	MNL2	Q12205	849 aa		4.14	□□□□□ -1.75
CWC22	YGR278W	SEC20	P28791	383 aa		4.13	□□□□□ -1.75
CWC22	YGR278W	THI12	P42883	340 aa		4.13	□□□□□ -1.75
CWC22	YGR278W	THI5	P43534	340 aa		4.13	□□□□□ -1.75
CWC22	YGR278W	THI11	P47183	340 aa		4.13	□□□□□ -1.75
CWC22	YGR278W	THI13	Q07748	340 aa		4.13	□□□□□ -1.75
CWC22	YGR278W	BDS1	Q08347	646 aa		4.13	□□□□□ -1.75
CWC22	YGR278W	APC11	Q12157	165 aa		4.13	□□□□□ -1.75
CWC22	YGR278W	STB3	Q12427	513 aa		4.13	□□□□□ -1.75
CWC22	YGR278W	TBS1	P38114	1094 aa		4.12	□□□□□ -1.75
CWC22	YGR278W	SUM1	P46676	1062 aa		4.12	□□□□□ -1.75
CWC22	YGR278W	SNU71	P53207	620 aa	Known RBP	4.12	□□□□□ -1.75
CWC22	YGR278W	ORC1	P54784	914 aa	Predicted RBP	4.12	□□□□□ -1.75
CWC22	YGR278W	MRPL33	P20084	86 aa		4.11	□□□□□ -1.75
CWC22	YGR278W	SEC8	P32855	1065 aa		4.11	□□□□□ -1.75
CWC22	YGR278W	SHM1	P37292	490 aa	Predicted RBP	4.11	□□□□□ -1.75
CWC22	YGR278W	CWH41	P53008	833 aa		4.11	□□□□□ -1.75
CWC22	YGR278W	SUT1	P53032	299 aa	Known RBP	4.11	□□□□□ -1.75
CWC22	YGR278W	TOS4	Q06266	489 aa		4.11	□□□□□ -1.75
CWC22	YGR278W	SSN3	P39073	555 aa		4.1	□□□□□ -1.75
CWC22	YGR278W	FYV10	P40492	516 aa		4.1	□□□□□ -1.75
CWC22	YGR278W	SRC1	Q03707	834 aa		4.1	□□□□□ -1.75
CWC22	YGR278W	TRS120	Q04183	1289 aa		4.1	□□□□□ -1.75
CWC22	YGR278W	TY1A-DR3	Q12441	440 aa		4.1	□□□□□ -1.75
CWC22	YGR278W	RPS31	P05759	152 aa	Known RBP	4.09	□□□□□ -1.75
CWC22	YGR278W	MCM1	P11746	286 aa		4.09	□□□□□ -1.75
CWC22	YGR278W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
CWC22	YGR278W	OYE2	Q03558	400 aa	Known RBP	4.09	□□□□□ -1.75
CWC22	YGR278W	Q0182	Q9ZZW1	134 aa		4.09	□□□□□ -1.75
CWC22	YGR278W	VMA3	P25515	160 aa		4.09	□□□□□ -1.76
CWC22	YGR278W	MCM2	P29469	868 aa		4.09	□□□□□ -1.76
CWC22	YGR278W	MLF3	P32047	452 aa		4.09	□□□□□ -1.76
CWC22	YGR278W	ASH1	P34233	588 aa		4.09	□□□□□ -1.76
CWC22	YGR278W	PHO4	P07270	312 aa	Known RBP	4.08	□□□□□ -1.76
CWC22	YGR278W	DLD1	P32891	587 aa		4.08	□□□□□ -1.76
CWC22	YGR278W	AAD14	P42884	376 aa		4.08	□□□□□ -1.76
CWC22	YGR278W	CDC4	P07834	779 aa		4.07	□□□□□ -1.76
CWC22	YGR278W	MET1	P36150	593 aa		4.07	□□□□□ -1.76
CWC22	YGR278W	YJR107W	P47145	328 aa		4.07	□□□□□ -1.76
CWC22	YGR278W	SPR28	Q04921	423 aa		4.07	□□□□□ -1.76
CWC22	YGR278W	SLA1	P32790	1244 aa		4.07	□□□□□ -1.76
CWC22	YGR278W	DLD3	P39976	496 aa	Known RBP	4.07	□□□□□ -1.76
CWC22	YGR278W	DAK2	P43550	591 aa		4.07	□□□□□ -1.76
CWC22	YGR278W	NOP7	P53261	605 aa	Known RBP	4.07	□□□□□ -1.76
CWC22	YGR278W	URN1	Q06525	465 aa	Known RBP	4.07	□□□□□ -1.76
CWC22	YGR278W	AFT1	P22149	690 aa		4.06	□□□□□ -1.76
CWC22	YGR278W	UGA3	P26370	528 aa		4.06	□□□□□ -1.76
CWC22	YGR278W	MET10	P39692	1035 aa		4.06	□□□□□ -1.76
CWC22	YGR278W	QDR2	P40474	542 aa		4.06	□□□□□ -1.76
CWC22	YGR278W	SPR3	P41901	512 aa		4.06	□□□□□ -1.76
CWC22	YGR278W	JJJ2	P46997	583 aa		4.06	□□□□□ -1.76
CWC22	YGR278W	ASF1	P32447	279 aa		4.05	□□□□□ -1.76
CWC22	YGR278W	RPT1	P33299	467 aa	Known RBP	4.05	□□□□□ -1.76
CWC22	YGR278W	SCD5	P34758	872 aa		4.05	□□□□□ -1.76
CWC22	YGR278W	BSD2	P38356	321 aa		4.05	□□□□□ -1.76
CWC22	YGR278W	ALA1	P40825	983 aa	Known RBP	4.05	□□□□□ -1.76
CWC22	YGR278W	RGD2	P43556	714 aa		4.05	□□□□□ -1.76
CWC22	YGR278W	PTK2	P47116	818 aa	Known RBP	4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 48.7 ms