RNA–Protein interactions for RNA: YDR460W

TFB3, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB3, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB3	YDR460W	RPL34B	P40525	121 aa	Known RBP	5.84	□□□□□ -1.47
TFB3	YDR460W	RRN7	P40992	514 aa		5.84	□□□□□ -1.47
TFB3	YDR460W	GYP1	Q08484	637 aa		5.84	□□□□□ -1.47
TFB3	YDR460W	YDL206W	Q12424	762 aa		5.84	□□□□□ -1.47
TFB3	YDR460W	TIF1	P10081	395 aa	Known RBP	5.83	□□□□□ -1.48
TFB3	YDR460W	PAC1	P39946	494 aa	Known RBP	5.83	□□□□□ -1.48
TFB3	YDR460W	RPA14	P50106	137 aa		5.83	□□□□□ -1.48
TFB3	YDR460W	YNL108C	P53929	270 aa		5.83	□□□□□ -1.48
TFB3	YDR460W	SRC1	Q03707	834 aa		5.83	□□□□□ -1.48
TFB3	YDR460W	SAS4	Q04003	481 aa		5.83	□□□□□ -1.48
TFB3	YDR460W	SPT16	P32558	1035 aa	Known RBP	5.82	□□□□□ -1.48
TFB3	YDR460W	SUP45	P12385	437 aa	Known RBP	5.81	□□□□□ -1.48
TFB3	YDR460W	YPR097W	Q06839	1073 aa		5.81	□□□□□ -1.48
TFB3	YDR460W	ALR1	Q08269	859 aa		5.81	□□□□□ -1.48
TFB3	YDR460W	YTA7	P40340	1379 aa		5.8	□□□□□ -1.48
TFB3	YDR460W	ERG12	P07277	443 aa		5.8	□□□□□ -1.48
TFB3	YDR460W	YDJ1	P25491	409 aa	Known RBP	5.8	□□□□□ -1.48
TFB3	YDR460W	KXD1	P53158	218 aa		5.8	□□□□□ -1.48
TFB3	YDR460W	NAF1	P53919	492 aa	Known RBP	5.8	□□□□□ -1.48
TFB3	YDR460W	BUD3	P25558	1636 aa		5.8	□□□□□ -1.48
TFB3	YDR460W	NUP157	P40064	1391 aa	Known RBP	5.8	□□□□□ -1.48
TFB3	YDR460W	CHC1	P22137	1653 aa	Known RBP	5.79	□□□□□ -1.48
TFB3	YDR460W	PDC1	P06169	563 aa	Known RBP	5.79	□□□□□ -1.48
TFB3	YDR460W	RTG2	P32608	588 aa	Known RBP	5.79	□□□□□ -1.48
TFB3	YDR460W	YFR016C	P43597	1233 aa	Known RBP	5.79	□□□□□ -1.48
TFB3	YDR460W	STH1	P32597	1359 aa		5.79	□□□□□ -1.48
TFB3	YDR460W	ENO2	P00925	437 aa	Known RBP	5.78	□□□□□ -1.48
TFB3	YDR460W	RTT106	P40161	455 aa		5.78	□□□□□ -1.48
TFB3	YDR460W	YPR204W	Q08995	1032 aa		5.78	□□□□□ -1.48
TFB3	YDR460W	CLC1	P17891	233 aa		5.77	□□□□□ -1.49
TFB3	YDR460W	POL5	P39985	1022 aa	Known RBP	5.77	□□□□□ -1.49
TFB3	YDR460W	HXT10	P43581	546 aa		5.77	□□□□□ -1.49
TFB3	YDR460W	USO1	P25386	1790 aa		5.76	□□□□□ -1.49
TFB3	YDR460W	MRF1	P30775	413 aa	Predicted RBP	5.76	□□□□□ -1.49
TFB3	YDR460W	TPD3	P31383	635 aa		5.76	□□□□□ -1.49
TFB3	YDR460W	YAP3	P38749	330 aa		5.76	□□□□□ -1.49
TFB3	YDR460W	MAK10	Q02197	733 aa		5.75	□□□□□ -1.49
TFB3	YDR460W	MLP2	P40457	1679 aa		5.75	□□□□□ -1.49
TFB3	YDR460W	ENO1	P00924	437 aa	Known RBP	5.74	□□□□□ -1.49
TFB3	YDR460W	MOD5	P07884	428 aa		5.74	□□□□□ -1.49
TFB3	YDR460W	RRD1	P40454	393 aa	Known RBP	5.74	□□□□□ -1.49
TFB3	YDR460W	FIG4	P42837	879 aa		5.74	□□□□□ -1.49
TFB3	YDR460W	YPP1	P46951	817 aa		5.74	□□□□□ -1.49
TFB3	YDR460W	RIM21	P48565	533 aa		5.74	□□□□□ -1.49
TFB3	YDR460W	MCM16	Q12262	181 aa		5.74	□□□□□ -1.49
TFB3	YDR460W	TEC1	P18412	486 aa		5.73	□□□□□ -1.49
TFB3	YDR460W	SDH2	P21801	266 aa		5.73	□□□□□ -1.49
TFB3	YDR460W	TTI1	P36097	1038 aa		5.73	□□□□□ -1.49
TFB3	YDR460W	EAF7	P53911	425 aa	Known RBP	5.73	□□□□□ -1.49
TFB3	YDR460W	MRX10	Q05648	414 aa		5.73	□□□□□ -1.49
TFB3	YDR460W	SEC7	P11075	2009 aa	Known RBP	5.72	□□□□□ -1.49
TFB3	YDR460W	RAS1	P01119	309 aa		5.72	□□□□□ -1.49
TFB3	YDR460W	TY3B-G	Q99315	1547 aa		5.72	□□□□□ -1.49
TFB3	YDR460W	HSP82	P02829	709 aa	Known RBP	5.71	□□□□□ -1.5
TFB3	YDR460W	SSA4	P22202	642 aa	Known RBP	5.71	□□□□□ -1.5
TFB3	YDR460W	VAC17	P25591	423 aa		5.71	□□□□□ -1.5
TFB3	YDR460W	CPS1	P27614	576 aa		5.71	□□□□□ -1.5
TFB3	YDR460W	GUT2	P32191	649 aa		5.71	□□□□□ -1.5
TFB3	YDR460W	ISF1	P32488	338 aa		5.71	□□□□□ -1.5
TFB3	YDR460W	DEF1	P35732	738 aa	Known RBP	5.71	□□□□□ -1.5
TFB3	YDR460W	YPR084W	Q06821	456 aa		5.71	□□□□□ -1.5
TFB3	YDR460W	AIM44	Q99299	758 aa		5.71	□□□□□ -1.5
TFB3	YDR460W	FPR3	P38911	411 aa	Known RBP	5.7	□□□□□ -1.5
TFB3	YDR460W	EMP47	P43555	445 aa		5.7	□□□□□ -1.5
TFB3	YDR460W	STE20	Q03497	939 aa	Known RBP	5.7	□□□□□ -1.5
TFB3	YDR460W	SUB2	Q07478	446 aa	Known RBP	5.7	□□□□□ -1.5
TFB3	YDR460W	FRA1	Q07825	749 aa		5.7	□□□□□ -1.5
TFB3	YDR460W	PLP2	Q12017	286 aa		5.7	□□□□□ -1.5
TFB3	YDR460W	BNR1	P40450	1375 aa		5.69	□□□□□ -1.5
TFB3	YDR460W	YSP2	Q06681	1438 aa		5.69	□□□□□ -1.5
TFB3	YDR460W	MRX12	P47084	519 aa		5.69	□□□□□ -1.5
TFB3	YDR460W	RDS2	P19541	446 aa	Known RBP	5.68	□□□□□ -1.5
TFB3	YDR460W	BDP1	P46678	594 aa		5.68	□□□□□ -1.5
TFB3	YDR460W	YEL077C	Q3E7X8	1277 aa		5.68	□□□□□ -1.5
TFB3	YDR460W	FUN12	P39730	1002 aa	Known RBP	5.67	□□□□□ -1.5
TFB3	YDR460W	CST6	P40535	587 aa		5.67	□□□□□ -1.5
TFB3	YDR460W	FRK1	Q03002	865 aa	Predicted RBP	5.67	□□□□□ -1.5
TFB3	YDR460W	RNA1	P11745	407 aa	Known RBP	5.66	□□□□□ -1.5
TFB3	YDR460W	PEP12	P32854	288 aa		5.66	□□□□□ -1.5
TFB3	YDR460W	PUS5	Q06244	254 aa		5.66	□□□□□ -1.5
TFB3	YDR460W	ENV9	Q08651	330 aa		5.66	□□□□□ -1.5
TFB3	YDR460W	IKI3	Q06706	1349 aa	Known RBP	5.66	□□□□□ -1.5
TFB3	YDR460W	KIP2	P28743	706 aa		5.65	□□□□□ -1.5
TFB3	YDR460W	NUG1	P40010	520 aa	Known RBP	5.65	□□□□□ -1.5
TFB3	YDR460W	ATG3	P40344	310 aa		5.65	□□□□□ -1.5
TFB3	YDR460W	THI12	P42883	340 aa		5.65	□□□□□ -1.5
TFB3	YDR460W	THI5	P43534	340 aa		5.65	□□□□□ -1.5
TFB3	YDR460W	THI11	P47183	340 aa		5.65	□□□□□ -1.5
TFB3	YDR460W	THI13	Q07748	340 aa		5.65	□□□□□ -1.5
TFB3	YDR460W	SSA1	P10591	642 aa	Known RBP	5.64	□□□□□ -1.51
TFB3	YDR460W	IXR1	P33417	597 aa		5.64	□□□□□ -1.51
TFB3	YDR460W	APL6	P46682	809 aa		5.64	□□□□□ -1.51
TFB3	YDR460W	SYH1	Q02875	849 aa	Known RBP	5.64	□□□□□ -1.51
TFB3	YDR460W	AMS1	P22855	1083 aa		5.63	□□□□□ -1.51
TFB3	YDR460W	IME2	P32581	645 aa		5.63	□□□□□ -1.51
TFB3	YDR460W	TGL4	P36165	910 aa		5.63	□□□□□ -1.51
TFB3	YDR460W	YGR130C	P53278	816 aa		5.63	□□□□□ -1.51
TFB3	YDR460W	RGA2	Q06407	1009 aa		5.63	□□□□□ -1.51
TFB3	YDR460W	PUP1	P25043	261 aa		5.62	□□□□□ -1.51
TFB3	YDR460W	SOH1	P38633	127 aa		5.62	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms