RNA–Protein interactions for RNA: YBR229C

ROT2, Transcript of Glucosidase II catalytic subunit, yeast

Gene ROT2, Length 2,865 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROT2	YBR229C	NUP133	P36161	1157 aa		5.78	□□□□□ -1.48
ROT2	YBR229C	RKM3	P38222	552 aa		5.78	□□□□□ -1.48
ROT2	YBR229C	UBP12	P39538	1254 aa		5.78	□□□□□ -1.48
ROT2	YBR229C	MEC3	Q02574	474 aa		5.78	□□□□□ -1.48
ROT2	YBR229C	RVS167	P39743	482 aa	Known RBP	5.78	□□□□□ -1.48
ROT2	YBR229C	CTR9	P89105	1077 aa		5.78	□□□□□ -1.48
ROT2	YBR229C	BRE1	Q07457	700 aa	Known RBP	5.78	□□□□□ -1.48
ROT2	YBR229C	AAP1	P37898	856 aa	Known RBP	5.77	□□□□□ -1.49
ROT2	YBR229C	RSM25	P40496	264 aa		5.77	□□□□□ -1.49
ROT2	YBR229C	FPR4	Q06205	392 aa	Predicted RBP	5.77	□□□□□ -1.49
ROT2	YBR229C	RIM20	Q12033	661 aa		5.77	□□□□□ -1.49
ROT2	YBR229C	SET1	P38827	1080 aa	Known RBP	5.77	□□□□□ -1.49
ROT2	YBR229C	PDR18	P53756	1333 aa		5.77	□□□□□ -1.49
ROT2	YBR229C	OSM1	P21375	501 aa	Known RBP	5.77	□□□□□ -1.49
ROT2	YBR229C	AIM9	P40053	627 aa	Known RBP	5.77	□□□□□ -1.49
ROT2	YBR229C	MLC1	P53141	149 aa		5.77	□□□□□ -1.49
ROT2	YBR229C	LPD1	P09624	499 aa	Known RBP	5.76	□□□□□ -1.49
ROT2	YBR229C	MIF2	P35201	549 aa		5.76	□□□□□ -1.49
ROT2	YBR229C	ADE16	P54113	591 aa	Known RBP	5.76	□□□□□ -1.49
ROT2	YBR229C	YGL242C	P53066	181 aa		5.75	□□□□□ -1.49
ROT2	YBR229C	ELM1	P32801	640 aa		5.75	□□□□□ -1.49
ROT2	YBR229C	MRPS35	P53292	345 aa		5.75	□□□□□ -1.49
ROT2	YBR229C	RMT2	Q03305	412 aa		5.75	□□□□□ -1.49
ROT2	YBR229C	PEX19	Q07418	342 aa		5.75	□□□□□ -1.49
ROT2	YBR229C	RPL19A	P0CX82	189 aa	Known RBP	5.74	□□□□□ -1.49
ROT2	YBR229C	RPL19B	P0CX83	189 aa	Predicted RBP	5.74	□□□□□ -1.49
ROT2	YBR229C	SPO22	P40511	975 aa		5.74	□□□□□ -1.49
ROT2	YBR229C	YGL081W	P53156	320 aa		5.74	□□□□□ -1.49
ROT2	YBR229C	ALO1	P54783	526 aa	Known RBP	5.74	□□□□□ -1.49
ROT2	YBR229C	KTR3	P38130	404 aa	Predicted RBP	5.73	□□□□□ -1.49
ROT2	YBR229C	KRI1	P42846	591 aa	Known RBP	5.73	□□□□□ -1.49
ROT2	YBR229C	RMD1	Q03441	430 aa		5.73	□□□□□ -1.49
ROT2	YBR229C	YLR271W	Q06152	274 aa		5.73	□□□□□ -1.49
ROT2	YBR229C	APC11	Q12157	165 aa		5.73	□□□□□ -1.49
ROT2	YBR229C	KTR1	P27810	393 aa	Known RBP	5.73	□□□□□ -1.49
ROT2	YBR229C	MDG1	P53885	366 aa		5.73	□□□□□ -1.49
ROT2	YBR229C	SSP2	Q08646	371 aa		5.73	□□□□□ -1.49
ROT2	YBR229C	TAF13	P11747	167 aa		5.73	□□□□□ -1.49
ROT2	YBR229C	MPE1	P35728	441 aa	Known RBP	5.73	□□□□□ -1.49
ROT2	YBR229C	MIC60	P36112	540 aa		5.73	□□□□□ -1.49
ROT2	YBR229C	CWH41	P53008	833 aa		5.73	□□□□□ -1.49
ROT2	YBR229C	NOP53	Q12080	455 aa	Known RBP	5.73	□□□□□ -1.49
ROT2	YBR229C	TPM1	P17536	199 aa	Known RBP	5.72	□□□□□ -1.49
ROT2	YBR229C	MCM2	P29469	868 aa		5.72	□□□□□ -1.49
ROT2	YBR229C	YBP2	P53169	641 aa		5.72	□□□□□ -1.49
ROT2	YBR229C	VPS64	Q03944	604 aa		5.72	□□□□□ -1.49
ROT2	YBR229C	ETT1	Q08421	412 aa	Known RBP	5.72	□□□□□ -1.49
ROT2	YBR229C	PRX1	P34227	261 aa	Known RBP	5.72	□□□□□ -1.49
ROT2	YBR229C	TTI1	P36097	1038 aa		5.72	□□□□□ -1.49
ROT2	YBR229C	IES2	P40154	320 aa		5.72	□□□□□ -1.49
ROT2	YBR229C	CCT5	P40413	562 aa	Known RBP	5.72	□□□□□ -1.49
ROT2	YBR229C	PEX14	P53112	341 aa		5.72	□□□□□ -1.49
ROT2	YBR229C	ATG13	Q06628	738 aa		5.72	□□□□□ -1.49
ROT2	YBR229C	MTC5	Q03897	1148 aa		5.71	□□□□□ -1.5
ROT2	YBR229C	YPR204W	Q08995	1032 aa		5.71	□□□□□ -1.5
ROT2	YBR229C	NOP58	Q12499	511 aa	Known RBP	5.71	□□□□□ -1.5
ROT2	YBR229C	RIM15	P43565	1770 aa		5.71	□□□□□ -1.5
ROT2	YBR229C	PSK2	Q08217	1101 aa		5.71	□□□□□ -1.5
ROT2	YBR229C	YPL150W	Q12152	901 aa		5.71	□□□□□ -1.5
ROT2	YBR229C	MBR1	P23493	339 aa		5.7	□□□□□ -1.5
ROT2	YBR229C	APL2	P36000	726 aa	Predicted RBP	5.7	□□□□□ -1.5
ROT2	YBR229C	DID4	P36108	232 aa		5.7	□□□□□ -1.5
ROT2	YBR229C	CTF18	P49956	741 aa		5.7	□□□□□ -1.5
ROT2	YBR229C	UTP10	P42945	1769 aa	Known RBP	5.7	□□□□□ -1.5
ROT2	YBR229C	YKL133C	P36066	463 aa		5.7	□□□□□ -1.5
ROT2	YBR229C	OSH3	P38713	996 aa	Known RBP	5.7	□□□□□ -1.5
ROT2	YBR229C	HXT10	P43581	546 aa		5.7	□□□□□ -1.5
ROT2	YBR229C	FRK1	Q03002	865 aa	Predicted RBP	5.7	□□□□□ -1.5
ROT2	YBR229C	PSH1	Q12161	406 aa		5.7	□□□□□ -1.5
ROT2	YBR229C	GYP5	Q12344	894 aa		5.7	□□□□□ -1.5
ROT2	YBR229C	ARG8	P18544	423 aa		5.69	□□□□□ -1.5
ROT2	YBR229C	STM1	P39015	273 aa	Known RBP	5.69	□□□□□ -1.5
ROT2	YBR229C	EPS1	P40557	701 aa		5.69	□□□□□ -1.5
ROT2	YBR229C	ESC2	Q06340	456 aa		5.69	□□□□□ -1.5
ROT2	YBR229C	SUP35	P05453	685 aa	Known RBP	5.69	□□□□□ -1.5
ROT2	YBR229C	FRS2	P15625	503 aa	Known RBP	5.69	□□□□□ -1.5
ROT2	YBR229C	REB1	P21538	810 aa		5.69	□□□□□ -1.5
ROT2	YBR229C	MRPL10	P36520	322 aa		5.69	□□□□□ -1.5
ROT2	YBR229C	NPR3	P38742	1146 aa		5.69	□□□□□ -1.5
ROT2	YBR229C	PIB2	P53191	635 aa		5.69	□□□□□ -1.5
ROT2	YBR229C	ELG1	Q12050	791 aa		5.69	□□□□□ -1.5
ROT2	YBR229C	TSR3	Q12094	313 aa	Known RBP	5.69	□□□□□ -1.5
ROT2	YBR229C	PHM7	Q12252	991 aa		5.69	□□□□□ -1.5
ROT2	YBR229C	CPA2	P03965	1118 aa	Known RBP	5.69	□□□□□ -1.5
ROT2	YBR229C	YHL017W	P38745	532 aa		5.69	□□□□□ -1.5
ROT2	YBR229C	ENT1	Q12518	454 aa		5.69	□□□□□ -1.5
ROT2	YBR229C	DDP1	Q99321	188 aa	Known RBP	5.69	□□□□□ -1.5
ROT2	YBR229C	SSK22	P25390	1331 aa	Predicted RBP	5.68	□□□□□ -1.5
ROT2	YBR229C	OPI1	P21957	404 aa		5.68	□□□□□ -1.5
ROT2	YBR229C	STU2	P46675	888 aa		5.68	□□□□□ -1.5
ROT2	YBR229C	TUM1	Q08686	304 aa	Known RBP	5.67	□□□□□ -1.5
ROT2	YBR229C	CYC8	P14922	966 aa		5.67	□□□□□ -1.5
ROT2	YBR229C	PBY1	P38254	753 aa		5.67	□□□□□ -1.5
ROT2	YBR229C	ECM23	Q02710	187 aa		5.67	□□□□□ -1.5
ROT2	YBR229C	PKH1	Q03407	766 aa		5.67	□□□□□ -1.5
ROT2	YBR229C	SAC3	P46674	1301 aa		5.67	□□□□□ -1.5
ROT2	YBR229C	DCD1	P06773	312 aa		5.66	□□□□□ -1.5
ROT2	YBR229C	MATALPHA2	P0CY08	210 aa		5.66	□□□□□ -1.5
ROT2	YBR229C	HMLALPHA2	P0CY09	210 aa		5.66	□□□□□ -1.5
ROT2	YBR229C	ATE1	P16639	503 aa		5.66	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms