RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 POLA1P09884 1462 aaPredicted RBP8.42□□□□□ -1.06
CASC19-260ENST00000641828 EVX2Q03828 476 aa8.42□□□□□ -1.06
CASC19-260ENST00000641828 MAP3K7O43318 606 aa8.41□□□□□ -1.06
CASC19-260ENST00000641828 PHF14O94880 888 aa8.41□□□□□ -1.06
CASC19-260ENST00000641828 MDM2Q00987 491 aaPredicted RBP8.41□□□□□ -1.06
CASC19-260ENST00000641828 EPAS1Q99814 870 aa8.41□□□□□ -1.06
CASC19-260ENST00000641828 TRAK2O60296 914 aa8.41□□□□□ -1.06
CASC19-260ENST00000641828 SEC24BO95487 1268 aa8.41□□□□□ -1.06
CASC19-260ENST00000641828 MCM6Q14566 821 aa8.41□□□□□ -1.06
CASC19-260ENST00000641828 DIP2BQ9P265 1576 aa8.4□□□□□ -1.06
CASC19-260ENST00000641828 PHOX2BQ99453 314 aa8.4□□□□□ -1.06
CASC19-260ENST00000641828 COLQQ9Y215 455 aaPredicted RBP8.4□□□□□ -1.06
CASC19-260ENST00000641828 WDR97A6NE52 1622 aa8.4□□□□□ -1.07
CASC19-260ENST00000641828 SOGA1O94964 1423 aa8.39□□□□□ -1.07
CASC19-260ENST00000641828 GRIN2BQ13224 1484 aa8.39□□□□□ -1.07
CASC19-260ENST00000641828 SLC34A2O95436 690 aa8.39□□□□□ -1.07
CASC19-260ENST00000641828 SSTR3P32745 418 aaPredicted RBP8.39□□□□□ -1.07
CASC19-260ENST00000641828 SKIV2LQ15477 1246 aaKnown RBP8.39□□□□□ -1.07
CASC19-260ENST00000641828 RBM33Q96EV2 1170 aaKnown RBP8.39□□□□□ -1.07
CASC19-260ENST00000641828 CEP170Q5SW79 1584 aa8.38□□□□□ -1.07
CASC19-260ENST00000641828 MYT1LQ9UL68 1186 aa8.38□□□□□ -1.07
CASC19-260ENST00000641828 TSR1Q2NL82 804 aaKnown RBP8.37□□□□□ -1.07
CASC19-260ENST00000641828 CCDC82Q8N4S0 544 aa8.37□□□□□ -1.07
CASC19-260ENST00000641828 TOP2AP11388 1531 aaKnown RBP8.37□□□□□ -1.07
CASC19-260ENST00000641828 BEGAINQ9BUH8 593 aa8.37□□□□□ -1.07
CASC19-260ENST00000641828 PCDHGA10Q9Y5H3 936 aa8.37□□□□□ -1.07
CASC19-260ENST00000641828 SLAIN1Q8ND83 568 aa8.36□□□□□ -1.07
CASC19-260ENST00000641828 PBRM1Q86U86 1689 aa8.36□□□□□ -1.07
CASC19-260ENST00000641828 RBM19Q9Y4C8 960 aaKnown RBP8.36□□□□□ -1.07
CASC19-260ENST00000641828 MAPKBP1O60336 1514 aa8.35□□□□□ -1.07
CASC19-260ENST00000641828 SPATA31D1Q6ZQQ2 1576 aa8.35□□□□□ -1.07
CASC19-260ENST00000641828 C3orf67Q6ZVT6 689 aa8.35□□□□□ -1.07
CASC19-260ENST00000641828 TYW1BQ6NUM6 668 aa8.34□□□□□ -1.07
CASC19-260ENST00000641828 FAM217BQ9NTX9 383 aaPredicted RBP8.34□□□□□ -1.07
CASC19-260ENST00000641828 ATP1B4Q9UN42 357 aaPredicted RBP8.34□□□□□ -1.07
CASC19-260ENST00000641828 METTL3Q86U44 580 aaKnown RBP8.34□□□□□ -1.07
CASC19-260ENST00000641828 PROSER2Q86WR7 435 aaPredicted RBP8.34□□□□□ -1.07
CASC19-260ENST00000641828 PROCA1Q8NCQ7 364 aaPredicted RBP8.34□□□□□ -1.07
CASC19-260ENST00000641828 FAM161AQ3B820 660 aa8.33□□□□□ -1.08
CASC19-260ENST00000641828 TOP2BQ02880 1626 aa8.33□□□□□ -1.08
CASC19-260ENST00000641828 OATP04181 439 aa8.32□□□□□ -1.08
CASC19-260ENST00000641828 POLR3EQ9NVU0 708 aa8.32□□□□□ -1.08
CASC19-260ENST00000641828 FBXW7Q969H0 707 aa8.32□□□□□ -1.08
CASC19-260ENST00000641828 POTEFA5A3E0 1075 aa8.31□□□□□ -1.08
CASC19-260ENST00000641828 PDIA4P13667 645 aaKnown RBP8.31□□□□□ -1.08
CASC19-260ENST00000641828 NLRP7Q8WX94 980 aa8.31□□□□□ -1.08
CASC19-260ENST00000641828 POM121Q96HA1 1249 aa8.31□□□□□ -1.08
CASC19-260ENST00000641828 SLC39A7Q92504 469 aa8.3□□□□□ -1.08
CASC19-260ENST00000641828 JPH4Q96JJ6 628 aa8.3□□□□□ -1.08
CASC19-260ENST00000641828 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.3□□□□□ -1.08
CASC19-260ENST00000641828 SHROOM2Q13796 1616 aa8.3□□□□□ -1.08
CASC19-260ENST00000641828 RAD21O60216 631 aa8.3□□□□□ -1.08
CASC19-260ENST00000641828 MYSM1Q5VVJ2 828 aa8.3□□□□□ -1.08
CASC19-260ENST00000641828 PADI6Q6TGC4 694 aa8.3□□□□□ -1.08
CASC19-260ENST00000641828 FNBP4Q8N3X1 1017 aaPredicted RBP8.3□□□□□ -1.08
CASC19-260ENST00000641828 ZNF777Q9ULD5 760 aaPredicted RBP8.3□□□□□ -1.08
CASC19-260ENST00000641828 PCDHGA4Q9Y5G9 962 aa8.3□□□□□ -1.08
CASC19-260ENST00000641828 FGD5Q6ZNL6 1462 aa8.29□□□□□ -1.08
CASC19-260ENST00000641828 CERKQ8TCT0 537 aa8.29□□□□□ -1.08
CASC19-260ENST00000641828 PXYLP1Q8TE99 480 aa8.29□□□□□ -1.08
CASC19-260ENST00000641828 DCBLD2Q96PD2 775 aa8.29□□□□□ -1.08
CASC19-260ENST00000641828 ADGRG1Q9Y653 693 aa8.29□□□□□ -1.08
CASC19-260ENST00000641828 GABBR2O75899 941 aa8.28□□□□□ -1.08
CASC19-260ENST00000641828 CLK2P49760 499 aaKnown RBP8.28□□□□□ -1.08
CASC19-260ENST00000641828 GRIN2AQ12879 1464 aa8.28□□□□□ -1.08
CASC19-260ENST00000641828 FANCIQ9NVI1 1328 aa8.28□□□□□ -1.08
CASC19-260ENST00000641828 SPDYE5A6NIY4 337 aa8.27□□□□□ -1.09
CASC19-260ENST00000641828 C7P10643 843 aa8.27□□□□□ -1.09
CASC19-260ENST00000641828 CCDC88BA6NC98 1476 aa8.27□□□□□ -1.09
CASC19-260ENST00000641828 PRG4Q92954 1404 aaPredicted RBP8.26□□□□□ -1.09
CASC19-260ENST00000641828 C6orf132Q5T0Z8 1188 aa8.26□□□□□ -1.09
CASC19-260ENST00000641828 CEP162Q5TB80 1403 aa8.26□□□□□ -1.09
CASC19-260ENST00000641828 ADCY10Q96PN6 1610 aa8.26□□□□□ -1.09
CASC19-260ENST00000641828 RANGAP1P46060 587 aaPredicted RBP8.25□□□□□ -1.09
CASC19-260ENST00000641828 FOSBP53539 338 aa8.25□□□□□ -1.09
CASC19-260ENST00000641828 TBC1D2Q9BYX2 928 aa8.25□□□□□ -1.09
CASC19-260ENST00000641828 RBM27Q9P2N5 1060 aaKnown RBP8.25□□□□□ -1.09
CASC19-260ENST00000641828 TTC13Q8NBP0 860 aa8.25□□□□□ -1.09
CASC19-260ENST00000641828 METRNQ9UJH8 293 aa8.25□□□□□ -1.09
CASC19-260ENST00000641828 COG6Q9Y2V7 657 aa8.25□□□□□ -1.09
CASC19-260ENST00000641828 NUP160Q12769 1436 aa8.25□□□□□ -1.09
CASC19-260ENST00000641828 PPRC1Q5VV67 1664 aaKnown RBP8.24□□□□□ -1.09
CASC19-260ENST00000641828 NEFLP07196 543 aa8.24□□□□□ -1.09
CASC19-260ENST00000641828 RFC5P40937 340 aa8.24□□□□□ -1.09
CASC19-260ENST00000641828 DIXDC1Q155Q3 683 aa8.24□□□□□ -1.09
CASC19-260ENST00000641828 BANK1Q8NDB2 785 aa8.24□□□□□ -1.09
CASC19-260ENST00000641828 CCDC97Q96F63 343 aaPredicted RBP8.24□□□□□ -1.09
CASC19-260ENST00000641828 SERPINA10Q9UK55 444 aa8.24□□□□□ -1.09
CASC19-260ENST00000641828 TNIKQ9UKE5 1360 aa8.24□□□□□ -1.09
CASC19-260ENST00000641828 ZBTB7CA1YPR0 619 aa8.24□□□□□ -1.09
CASC19-260ENST00000641828 ERICH6BQ5W0A0 696 aa8.24□□□□□ -1.09
CASC19-260ENST00000641828 ZDHHC16Q969W1 377 aa8.23□□□□□ -1.09
CASC19-260ENST00000641828 SNRKQ9NRH2 765 aa8.23□□□□□ -1.09
CASC19-260ENST00000641828 ZNF454Q8N9F8 522 aa8.22□□□□□ -1.09
CASC19-260ENST00000641828 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.22□□□□□ -1.09
CASC19-260ENST00000641828 RBM46Q8TBY0 533 aaKnown RBP8.22□□□□□ -1.09
CASC19-260ENST00000641828 FBXO31Q5XUX0 539 aaPredicted RBP8.21□□□□□ -1.1
CASC19-260ENST00000641828 LIMD1Q9UGP4 676 aa8.21□□□□□ -1.1
CASC19-260ENST00000641828 DEKP35659 375 aaKnown RBP8.2□□□□□ -1.1
CASC19-260ENST00000641828 PRSS12P56730 875 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms