RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 POLA1P09884 1462 aaPredicted RBP8.42□□□□□ -1.06
CASC19-260ENST00000641828 EVX2Q03828 476 aa8.42□□□□□ -1.06
CASC19-260ENST00000641828 MAP3K7O43318 606 aa8.41□□□□□ -1.06
CASC19-260ENST00000641828 PHF14O94880 888 aa8.41□□□□□ -1.06
CASC19-260ENST00000641828 MDM2Q00987 491 aaPredicted RBP8.41□□□□□ -1.06
CASC19-260ENST00000641828 EPAS1Q99814 870 aa8.41□□□□□ -1.06
CASC19-260ENST00000641828 TRAK2O60296 914 aa8.41□□□□□ -1.06
CASC19-260ENST00000641828 SEC24BO95487 1268 aa8.41□□□□□ -1.06
CASC19-260ENST00000641828 MCM6Q14566 821 aa8.41□□□□□ -1.06
CASC19-260ENST00000641828 DIP2BQ9P265 1576 aa8.4□□□□□ -1.06
CASC19-260ENST00000641828 PHOX2BQ99453 314 aa8.4□□□□□ -1.06
CASC19-260ENST00000641828 COLQQ9Y215 455 aaPredicted RBP8.4□□□□□ -1.06
CASC19-260ENST00000641828 WDR97A6NE52 1622 aa8.4□□□□□ -1.07
CASC19-260ENST00000641828 SOGA1O94964 1423 aa8.39□□□□□ -1.07
CASC19-260ENST00000641828 GRIN2BQ13224 1484 aa8.39□□□□□ -1.07
CASC19-260ENST00000641828 SLC34A2O95436 690 aa8.39□□□□□ -1.07
CASC19-260ENST00000641828 SSTR3P32745 418 aaPredicted RBP8.39□□□□□ -1.07
CASC19-260ENST00000641828 SKIV2LQ15477 1246 aaKnown RBP8.39□□□□□ -1.07
CASC19-260ENST00000641828 RBM33Q96EV2 1170 aaKnown RBP8.39□□□□□ -1.07
CASC19-260ENST00000641828 CEP170Q5SW79 1584 aa8.38□□□□□ -1.07
CASC19-260ENST00000641828 MYT1LQ9UL68 1186 aa8.38□□□□□ -1.07
CASC19-260ENST00000641828 TSR1Q2NL82 804 aaKnown RBP8.37□□□□□ -1.07
CASC19-260ENST00000641828 CCDC82Q8N4S0 544 aa8.37□□□□□ -1.07
CASC19-260ENST00000641828 TOP2AP11388 1531 aaKnown RBP8.37□□□□□ -1.07
CASC19-260ENST00000641828 BEGAINQ9BUH8 593 aa8.37□□□□□ -1.07
CASC19-260ENST00000641828 PCDHGA10Q9Y5H3 936 aa8.37□□□□□ -1.07
CASC19-260ENST00000641828 SLAIN1Q8ND83 568 aa8.36□□□□□ -1.07
CASC19-260ENST00000641828 PBRM1Q86U86 1689 aa8.36□□□□□ -1.07
CASC19-260ENST00000641828 RBM19Q9Y4C8 960 aaKnown RBP8.36□□□□□ -1.07
CASC19-260ENST00000641828 MAPKBP1O60336 1514 aa8.35□□□□□ -1.07
CASC19-260ENST00000641828 SPATA31D1Q6ZQQ2 1576 aa8.35□□□□□ -1.07
CASC19-260ENST00000641828 C3orf67Q6ZVT6 689 aa8.35□□□□□ -1.07
CASC19-260ENST00000641828 TYW1BQ6NUM6 668 aa8.34□□□□□ -1.07
CASC19-260ENST00000641828 FAM217BQ9NTX9 383 aaPredicted RBP8.34□□□□□ -1.07
CASC19-260ENST00000641828 ATP1B4Q9UN42 357 aaPredicted RBP8.34□□□□□ -1.07
CASC19-260ENST00000641828 METTL3Q86U44 580 aaKnown RBP8.34□□□□□ -1.07
CASC19-260ENST00000641828 PROSER2Q86WR7 435 aaPredicted RBP8.34□□□□□ -1.07
CASC19-260ENST00000641828 PROCA1Q8NCQ7 364 aaPredicted RBP8.34□□□□□ -1.07
CASC19-260ENST00000641828 FAM161AQ3B820 660 aa8.33□□□□□ -1.08
CASC19-260ENST00000641828 TOP2BQ02880 1626 aa8.33□□□□□ -1.08
CASC19-260ENST00000641828 OATP04181 439 aa8.32□□□□□ -1.08
CASC19-260ENST00000641828 POLR3EQ9NVU0 708 aa8.32□□□□□ -1.08
CASC19-260ENST00000641828 FBXW7Q969H0 707 aa8.32□□□□□ -1.08
CASC19-260ENST00000641828 POTEFA5A3E0 1075 aa8.31□□□□□ -1.08
CASC19-260ENST00000641828 PDIA4P13667 645 aaKnown RBP8.31□□□□□ -1.08
CASC19-260ENST00000641828 NLRP7Q8WX94 980 aa8.31□□□□□ -1.08
CASC19-260ENST00000641828 POM121Q96HA1 1249 aa8.31□□□□□ -1.08
CASC19-260ENST00000641828 SLC39A7Q92504 469 aa8.3□□□□□ -1.08
CASC19-260ENST00000641828 JPH4Q96JJ6 628 aa8.3□□□□□ -1.08
CASC19-260ENST00000641828 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.3□□□□□ -1.08
CASC19-260ENST00000641828 SHROOM2Q13796 1616 aa8.3□□□□□ -1.08
CASC19-260ENST00000641828 RAD21O60216 631 aa8.3□□□□□ -1.08
CASC19-260ENST00000641828 MYSM1Q5VVJ2 828 aa8.3□□□□□ -1.08
CASC19-260ENST00000641828 PADI6Q6TGC4 694 aa8.3□□□□□ -1.08
CASC19-260ENST00000641828 FNBP4Q8N3X1 1017 aaPredicted RBP8.3□□□□□ -1.08
CASC19-260ENST00000641828 ZNF777Q9ULD5 760 aaPredicted RBP8.3□□□□□ -1.08
CASC19-260ENST00000641828 PCDHGA4Q9Y5G9 962 aa8.3□□□□□ -1.08
CASC19-260ENST00000641828 FGD5Q6ZNL6 1462 aa8.29□□□□□ -1.08
CASC19-260ENST00000641828 CERKQ8TCT0 537 aa8.29□□□□□ -1.08
CASC19-260ENST00000641828 PXYLP1Q8TE99 480 aa8.29□□□□□ -1.08
CASC19-260ENST00000641828 DCBLD2Q96PD2 775 aa8.29□□□□□ -1.08
CASC19-260ENST00000641828 ADGRG1Q9Y653 693 aa8.29□□□□□ -1.08
CASC19-260ENST00000641828 GABBR2O75899 941 aa8.28□□□□□ -1.08
CASC19-260ENST00000641828 CLK2P49760 499 aaKnown RBP8.28□□□□□ -1.08
CASC19-260ENST00000641828 GRIN2AQ12879 1464 aa8.28□□□□□ -1.08
CASC19-260ENST00000641828 FANCIQ9NVI1 1328 aa8.28□□□□□ -1.08
CASC19-260ENST00000641828 SPDYE5A6NIY4 337 aa8.27□□□□□ -1.09
CASC19-260ENST00000641828 C7P10643 843 aa8.27□□□□□ -1.09
CASC19-260ENST00000641828 CCDC88BA6NC98 1476 aa8.27□□□□□ -1.09
CASC19-260ENST00000641828 PRG4Q92954 1404 aaPredicted RBP8.26□□□□□ -1.09
CASC19-260ENST00000641828 C6orf132Q5T0Z8 1188 aa8.26□□□□□ -1.09
CASC19-260ENST00000641828 CEP162Q5TB80 1403 aa8.26□□□□□ -1.09
CASC19-260ENST00000641828 ADCY10Q96PN6 1610 aa8.26□□□□□ -1.09
CASC19-260ENST00000641828 RANGAP1P46060 587 aaPredicted RBP8.25□□□□□ -1.09
CASC19-260ENST00000641828 FOSBP53539 338 aa8.25□□□□□ -1.09
CASC19-260ENST00000641828 TBC1D2Q9BYX2 928 aa8.25□□□□□ -1.09
CASC19-260ENST00000641828 RBM27Q9P2N5 1060 aaKnown RBP8.25□□□□□ -1.09
CASC19-260ENST00000641828 TTC13Q8NBP0 860 aa8.25□□□□□ -1.09
CASC19-260ENST00000641828 METRNQ9UJH8 293 aa8.25□□□□□ -1.09
CASC19-260ENST00000641828 COG6Q9Y2V7 657 aa8.25□□□□□ -1.09
CASC19-260ENST00000641828 NUP160Q12769 1436 aa8.25□□□□□ -1.09
CASC19-260ENST00000641828 PPRC1Q5VV67 1664 aaKnown RBP8.24□□□□□ -1.09
CASC19-260ENST00000641828 NEFLP07196 543 aa8.24□□□□□ -1.09
CASC19-260ENST00000641828 RFC5P40937 340 aa8.24□□□□□ -1.09
CASC19-260ENST00000641828 DIXDC1Q155Q3 683 aa8.24□□□□□ -1.09
CASC19-260ENST00000641828 BANK1Q8NDB2 785 aa8.24□□□□□ -1.09
CASC19-260ENST00000641828 CCDC97Q96F63 343 aaPredicted RBP8.24□□□□□ -1.09
CASC19-260ENST00000641828 SERPINA10Q9UK55 444 aa8.24□□□□□ -1.09
CASC19-260ENST00000641828 TNIKQ9UKE5 1360 aa8.24□□□□□ -1.09
CASC19-260ENST00000641828 ZBTB7CA1YPR0 619 aa8.24□□□□□ -1.09
CASC19-260ENST00000641828 ERICH6BQ5W0A0 696 aa8.24□□□□□ -1.09
CASC19-260ENST00000641828 ZDHHC16Q969W1 377 aa8.23□□□□□ -1.09
CASC19-260ENST00000641828 SNRKQ9NRH2 765 aa8.23□□□□□ -1.09
CASC19-260ENST00000641828 ZNF454Q8N9F8 522 aa8.22□□□□□ -1.09
CASC19-260ENST00000641828 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.22□□□□□ -1.09
CASC19-260ENST00000641828 RBM46Q8TBY0 533 aaKnown RBP8.22□□□□□ -1.09
CASC19-260ENST00000641828 FBXO31Q5XUX0 539 aaPredicted RBP8.21□□□□□ -1.1
CASC19-260ENST00000641828 LIMD1Q9UGP4 676 aa8.21□□□□□ -1.1
CASC19-260ENST00000641828 DEKP35659 375 aaKnown RBP8.2□□□□□ -1.1
CASC19-260ENST00000641828 PRSS12P56730 875 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms