RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 CFAP70Q5T0N1 1121 aa24.3■■□□□ 1.48
PHGDH-226ENST00000641756 IFT172Q9UG01 1749 aa24.3■■□□□ 1.48
PHGDH-226ENST00000641756 KIAA1210Q9ULL0 1709 aa24.29■■□□□ 1.48
PHGDH-226ENST00000641756 YEATS2Q9ULM3 1422 aa24.29■■□□□ 1.48
PHGDH-226ENST00000641756 KTN1Q86UP2 1357 aaKnown RBP24.29■■□□□ 1.48
PHGDH-226ENST00000641756 FAM69CQ0P6D2 419 aa24.29■■□□□ 1.48
PHGDH-226ENST00000641756 PANK3Q9H999 370 aa24.29■■□□□ 1.48
PHGDH-226ENST00000641756 ADGRB3O60242 1522 aa24.28■■□□□ 1.48
PHGDH-226ENST00000641756 PNISRQ8TF01 805 aaKnown RBP24.28■■□□□ 1.48
PHGDH-226ENST00000641756 CAMSAP1Q5T5Y3 1602 aa24.27■■□□□ 1.48
PHGDH-226ENST00000641756 PARD3Q8TEW0 1356 aa24.25■■□□□ 1.47
PHGDH-226ENST00000641756 NOS1P29475 1434 aa24.25■■□□□ 1.47
PHGDH-226ENST00000641756 BRD4O60885 1362 aaPredicted RBP24.25■■□□□ 1.47
PHGDH-226ENST00000641756 DIP2BQ9P265 1576 aa24.24■■□□□ 1.47
PHGDH-226ENST00000641756 CC2D1BQ5T0F9 858 aaKnown RBP24.24■■□□□ 1.47
PHGDH-226ENST00000641756 SIGLEC1Q9BZZ2 1709 aa24.23■■□□□ 1.47
PHGDH-226ENST00000641756 EIF3AQ14152 1382 aaKnown RBP24.22■■□□□ 1.47
PHGDH-226ENST00000641756 SENP3-EIF4A1A0A087X0R7 540 aa24.22■■□□□ 1.47
PHGDH-226ENST00000641756 TSPOAP1O95153 1857 aa24.21■■□□□ 1.47
PHGDH-226ENST00000641756 NRXN1Q9ULB1 1477 aa24.21■■□□□ 1.47
PHGDH-226ENST00000641756 PELP1Q8IZL8 1130 aaKnown RBP24.21■■□□□ 1.47
PHGDH-226ENST00000641756 NLRP13Q86W25 1043 aa24.19■■□□□ 1.46
PHGDH-226ENST00000641756 IRX6P78412 446 aaPredicted RBP24.18■■□□□ 1.46
PHGDH-226ENST00000641756 PPLO60437 1756 aa24.18■■□□□ 1.46
PHGDH-226ENST00000641756 SYNMO15061 1565 aa24.16■■□□□ 1.46
PHGDH-226ENST00000641756 LRPPRCP42704 1394 aaKnown RBP24.16■■□□□ 1.46
PHGDH-226ENST00000641756 CDCA8Q53HL2 280 aa24.16■■□□□ 1.46
PHGDH-226ENST00000641756 ZC3H13Q5T200 1668 aaKnown RBP24.14■■□□□ 1.46
PHGDH-226ENST00000641756 ZMYM4Q5VZL5 1548 aa24.13■■□□□ 1.45
PHGDH-226ENST00000641756 PIK3C2GO75747 1445 aa24.13■■□□□ 1.45
PHGDH-226ENST00000641756 PIK3C2BO00750 1634 aa24.12■■□□□ 1.45
PHGDH-226ENST00000641756 NUTM2DQ5VT03 806 aaPredicted RBP24.11■■□□□ 1.45
PHGDH-226ENST00000641756 MYOM1P52179 1685 aa24.11■■□□□ 1.45
PHGDH-226ENST00000641756 ARHGAP31Q2M1Z3 1444 aa24.11■■□□□ 1.45
PHGDH-226ENST00000641756 KDM5AP29375 1690 aaKnown RBP24.11■■□□□ 1.45
PHGDH-226ENST00000641756 KNSTRNQ9Y448 316 aa24.1■■□□□ 1.45
PHGDH-226ENST00000641756 RPGRIP1LQ68CZ1 1315 aa24.1■■□□□ 1.45
PHGDH-226ENST00000641756 ERVK-7P63135 1459 aa24.1■■□□□ 1.45
PHGDH-226ENST00000641756 SETBP1Q9Y6X0 1596 aa24.09■■□□□ 1.45
PHGDH-226ENST00000641756 C14orf93Q9H972 538 aaKnown RBP24.09■■□□□ 1.45
PHGDH-226ENST00000641756 IDI1Q13907 227 aa24.07■■□□□ 1.44
PHGDH-226ENST00000641756 TRAK1Q9UPV9 953 aa24.07■■□□□ 1.44
PHGDH-226ENST00000641756 SMG6Q86US8 1419 aaKnown RBP24.07■■□□□ 1.44
PHGDH-226ENST00000641756 TMEM132EQ6IEE7 984 aa24.07■■□□□ 1.44
PHGDH-226ENST00000641756 MYO3AQ8NEV4 1616 aa24.06■■□□□ 1.44
PHGDH-226ENST00000641756 NEXMIFQ5QGS0 1516 aa24.04■■□□□ 1.44
PHGDH-226ENST00000641756 ADGRB1O14514 1584 aa24.04■■□□□ 1.44
PHGDH-226ENST00000641756 AMER1Q5JTC6 1135 aaPredicted RBP24.04■■□□□ 1.44
PHGDH-226ENST00000641756 NUDCQ9Y266 331 aa24.04■■□□□ 1.44
PHGDH-226ENST00000641756 CENPJQ9HC77 1338 aaPredicted RBP24.04■■□□□ 1.44
PHGDH-226ENST00000641756 PREX1Q8TCU6 1659 aa24.03■■□□□ 1.44
PHGDH-226ENST00000641756 SLC24A1O60721 1099 aa24.02■■□□□ 1.44
PHGDH-226ENST00000641756 ASXL1Q8IXJ9 1541 aa24.01■■□□□ 1.43
PHGDH-226ENST00000641756 VGFO15240 615 aaPredicted RBP24.01■■□□□ 1.43
PHGDH-226ENST00000641756 SLC52A1Q9NWF4 448 aa24.01■■□□□ 1.43
PHGDH-226ENST00000641756 FBXO31Q5XUX0 539 aaPredicted RBP24■■□□□ 1.43
PHGDH-226ENST00000641756 SENP3Q9H4L4 574 aaPredicted RBP23.99■■□□□ 1.43
PHGDH-226ENST00000641756 SALL2Q9Y467 1007 aaPredicted RBP23.99■■□□□ 1.43
PHGDH-226ENST00000641756 SBNO2Q9Y2G9 1366 aa23.99■■□□□ 1.43
PHGDH-226ENST00000641756 MYO5BQ9ULV0 1848 aa23.99■■□□□ 1.43
PHGDH-226ENST00000641756 QRICH2Q9H0J4 1663 aa23.98■■□□□ 1.43
PHGDH-226ENST00000641756 PPP2R1AP30153 589 aa23.98■■□□□ 1.43
PHGDH-226ENST00000641756 TSHZ2Q9NRE2 1034 aa23.96■■□□□ 1.43
PHGDH-226ENST00000641756 KIF13AQ9H1H9 1805 aa23.96■■□□□ 1.43
PHGDH-226ENST00000641756 REREQ9P2R6 1566 aa23.95■■□□□ 1.42
PHGDH-226ENST00000641756 TMEM131LA2VDJ0 1609 aa23.94■■□□□ 1.42
PHGDH-226ENST00000641756 AGLP35573 1532 aa23.93■■□□□ 1.42
PHGDH-226ENST00000641756 MLECQ14165 292 aa23.93■■□□□ 1.42
PHGDH-226ENST00000641756 CARD14Q9BXL6 1004 aa23.93■■□□□ 1.42
PHGDH-226ENST00000641756 ERICH6BQ5W0A0 696 aa23.92■■□□□ 1.42
PHGDH-226ENST00000641756 NPC1L1Q9UHC9 1359 aa23.92■■□□□ 1.42
PHGDH-226ENST00000641756 BLMP54132 1417 aaPredicted RBP23.92■■□□□ 1.42
PHGDH-226ENST00000641756 CLTCQ00610 1675 aaKnown RBP23.91■■□□□ 1.42
PHGDH-226ENST00000641756 ARHGEF28Q8N1W1 1705 aaKnown RBP23.89■■□□□ 1.42
PHGDH-226ENST00000641756 ZFYVE9O95405 1425 aa23.89■■□□□ 1.41
PHGDH-226ENST00000641756 PPP4R2Q9NY27 417 aa23.88■■□□□ 1.41
PHGDH-226ENST00000641756 ADAMTS8Q9UP79 889 aa23.88■■□□□ 1.41
PHGDH-226ENST00000641756 INSRP06213 1382 aa23.87■■□□□ 1.41
PHGDH-226ENST00000641756 SLC12A5Q9H2X9 1139 aa23.86■■□□□ 1.41
PHGDH-226ENST00000641756 STK26Q9P289 416 aa23.86■■□□□ 1.41
PHGDH-226ENST00000641756 STAG3Q9UJ98 1225 aa23.86■■□□□ 1.41
PHGDH-226ENST00000641756 PPP6R1Q9UPN7 881 aa23.86■■□□□ 1.41
PHGDH-226ENST00000641756 ARHGEF40Q8TER5 1519 aa23.85■■□□□ 1.41
PHGDH-226ENST00000641756 SAFB2Q14151 953 aaKnown RBP eCLIP23.84■■□□□ 1.41
PHGDH-226ENST00000641756 WDR43Q15061 677 aaKnown RBP eCLIP23.84■■□□□ 1.41
PHGDH-226ENST00000641756 RNF123Q5XPI4 1314 aa23.84■■□□□ 1.41
PHGDH-226ENST00000641756 NSD3Q9BZ95 1437 aa23.82■■□□□ 1.4
PHGDH-226ENST00000641756 TULP4Q9NRJ4 1543 aa23.82■■□□□ 1.4
PHGDH-226ENST00000641756 PDE3BQ13370 1112 aa23.81■■□□□ 1.4
PHGDH-226ENST00000641756 CDCA7LQ96GN5 454 aa23.81■■□□□ 1.4
PHGDH-226ENST00000641756 EVC2Q86UK5 1308 aa23.8■■□□□ 1.4
PHGDH-226ENST00000641756 B4GALNT3Q6L9W6 998 aa23.8■■□□□ 1.4
PHGDH-226ENST00000641756 SPATA31D1Q6ZQQ2 1576 aa23.79■■□□□ 1.4
PHGDH-226ENST00000641756 CABP2Q9NPB3 220 aa23.78■■□□□ 1.4
PHGDH-226ENST00000641756 A2ML1A8K2U0 1454 aa23.75■■□□□ 1.39
PHGDH-226ENST00000641756 ALKQ9UM73 1620 aa23.75■■□□□ 1.39
PHGDH-226ENST00000641756 YTHDC2Q9H6S0 1430 aaKnown RBP23.74■■□□□ 1.39
PHGDH-226ENST00000641756 PTPRMP28827 1452 aa23.74■■□□□ 1.39
PHGDH-226ENST00000641756 RCAN3Q9UKA8 241 aa23.74■■□□□ 1.39
PHGDH-226ENST00000641756 PRAM1Q96QH2 718 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms