RNA–Protein interactions for RNA: ENST00000641733.1

CASC19-255, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,385 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-255ENST00000641733 IRF6O14896 467 aa10.6□□□□□ -0.71
CASC19-255ENST00000641733 MMRN1Q13201 1228 aa10.6□□□□□ -0.71
CASC19-255ENST00000641733 WNT2BQ93097 391 aa10.6□□□□□ -0.71
CASC19-255ENST00000641733 DNAJB2P25686 324 aa10.59□□□□□ -0.71
CASC19-255ENST00000641733 FAM161AQ3B820 660 aa10.59□□□□□ -0.71
CASC19-255ENST00000641733 METTL3Q86U44 580 aaKnown RBP10.59□□□□□ -0.71
CASC19-255ENST00000641733 PXYLP1Q8TE99 480 aa10.59□□□□□ -0.71
CASC19-255ENST00000641733 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.58□□□□□ -0.72
CASC19-255ENST00000641733 SLC4A3P48751 1232 aa10.58□□□□□ -0.72
CASC19-255ENST00000641733 KCTD12Q96CX2 325 aaKnown RBP10.58□□□□□ -0.72
CASC19-255ENST00000641733 CCDC102AQ96A19 550 aa10.57□□□□□ -0.72
CASC19-255ENST00000641733 LRCH3Q96II8 777 aa10.57□□□□□ -0.72
CASC19-255ENST00000641733 RCCD1A6NED2 376 aa10.56□□□□□ -0.72
CASC19-255ENST00000641733 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.55□□□□□ -0.72
CASC19-255ENST00000641733 SOWAHBA6NEL2 793 aa10.54□□□□□ -0.72
CASC19-255ENST00000641733 THSD4Q6ZMP0 1018 aa10.54□□□□□ -0.72
CASC19-255ENST00000641733 TMEM134Q9H6X4 195 aa10.54□□□□□ -0.72
CASC19-255ENST00000641733 SAMD7Q7Z3H4 446 aa10.53□□□□□ -0.72
CASC19-255ENST00000641733 SLF2Q8IX21 1173 aa10.52□□□□□ -0.72
CASC19-255ENST00000641733 NECTIN2Q92692 538 aa10.52□□□□□ -0.72
CASC19-255ENST00000641733 PLSCR2Q9NRY7 297 aa10.52□□□□□ -0.72
CASC19-255ENST00000641733 SWT1Q5T5J6 900 aaKnown RBP10.52□□□□□ -0.73
CASC19-255ENST00000641733 AK7Q96M32 723 aa10.52□□□□□ -0.73
CASC19-255ENST00000641733 BCAMP50895 628 aa10.5□□□□□ -0.73
CASC19-255ENST00000641733 HCSTQ9UBK5 93 aa10.5□□□□□ -0.73
CASC19-255ENST00000641733 ZBTB7CA1YPR0 619 aa10.49□□□□□ -0.73
CASC19-255ENST00000641733 RNF40O75150 1001 aa10.49□□□□□ -0.73
CASC19-255ENST00000641733 TSR3Q9UJK0 312 aaKnown RBP10.49□□□□□ -0.73
CASC19-255ENST00000641733 HRCP23327 699 aa10.48□□□□□ -0.73
CASC19-255ENST00000641733 PHOX2BQ99453 314 aa10.48□□□□□ -0.73
CASC19-255ENST00000641733 ARID3AQ99856 593 aa10.48□□□□□ -0.73
CASC19-255ENST00000641733 HPS5Q9UPZ3 1129 aa10.48□□□□□ -0.73
CASC19-255ENST00000641733 PTPN5P54829 565 aa10.47□□□□□ -0.73
CASC19-255ENST00000641733 RSPH4AQ5TD94 716 aa10.47□□□□□ -0.73
CASC19-255ENST00000641733 NYAP1Q6ZVC0 841 aa10.47□□□□□ -0.73
CASC19-255ENST00000641733 CCDC9Q9Y3X0 531 aaKnown RBP10.47□□□□□ -0.73
CASC19-255ENST00000641733 CLCN1P35523 988 aa10.46□□□□□ -0.74
CASC19-255ENST00000641733 PPP4CP60510 307 aa10.46□□□□□ -0.74
CASC19-255ENST00000641733 SULF1Q8IWU6 871 aa10.46□□□□□ -0.74
CASC19-255ENST00000641733 AMHR2Q16671 573 aa10.45□□□□□ -0.74
CASC19-255ENST00000641733 TRIM66O15016 1216 aa10.44□□□□□ -0.74
CASC19-255ENST00000641733 MDM2Q00987 491 aaPredicted RBP10.44□□□□□ -0.74
CASC19-255ENST00000641733 NLRP7Q8WX94 980 aa10.44□□□□□ -0.74
CASC19-255ENST00000641733 GPCPD1Q9NPB8 672 aa10.43□□□□□ -0.74
CASC19-255ENST00000641733 PDIA4P13667 645 aaKnown RBP10.42□□□□□ -0.74
CASC19-255ENST00000641733 TTLL12Q14166 644 aaPredicted RBP10.42□□□□□ -0.74
CASC19-255ENST00000641733 PRR14Q9BWN1 585 aa10.42□□□□□ -0.74
CASC19-255ENST00000641733 WBP1LQ9NX94 342 aa10.42□□□□□ -0.74
CASC19-255ENST00000641733 DDX11L8A8MPP1 907 aa10.39□□□□□ -0.75
CASC19-255ENST00000641733 RDH13Q8NBN7 331 aa10.39□□□□□ -0.75
CASC19-255ENST00000641733 PDE4DQ08499 809 aa10.39□□□□□ -0.75
CASC19-255ENST00000641733 KMT5BQ4FZB7 885 aa10.39□□□□□ -0.75
CASC19-255ENST00000641733 IL27Q8NEV9 243 aa10.39□□□□□ -0.75
CASC19-255ENST00000641733 ABCC9O60706 1549 aa10.38□□□□□ -0.75
CASC19-255ENST00000641733 TMUB1Q9BVT8 246 aa10.37□□□□□ -0.75
CASC19-255ENST00000641733 CFHP08603 1231 aa10.36□□□□□ -0.75
CASC19-255ENST00000641733 SLC10A3P09131 477 aa10.36□□□□□ -0.75
CASC19-255ENST00000641733 PARP9Q8IXQ6 854 aa10.36□□□□□ -0.75
CASC19-255ENST00000641733 FAM217BQ9NTX9 383 aaPredicted RBP10.36□□□□□ -0.75
CASC19-255ENST00000641733 GIGYF2Q6Y7W6 1299 aaKnown RBP10.35□□□□□ -0.75
CASC19-255ENST00000641733 CD46P15529 392 aa10.33□□□□□ -0.76
CASC19-255ENST00000641733 SSTR3P32745 418 aaPredicted RBP10.33□□□□□ -0.76
CASC19-255ENST00000641733 APLP1P51693 650 aa10.32□□□□□ -0.76
CASC19-255ENST00000641733 REPIN1Q9BWE0 567 aaKnown RBP10.32□□□□□ -0.76
CASC19-255ENST00000641733 GPBP1L1Q9HC44 474 aaPredicted RBP10.32□□□□□ -0.76
CASC19-255ENST00000641733 APBB1O00213 710 aa10.31□□□□□ -0.76
CASC19-255ENST00000641733 ACTN4O43707 911 aaKnown RBP10.31□□□□□ -0.76
CASC19-255ENST00000641733 GCGRP47871 477 aa10.31□□□□□ -0.76
CASC19-255ENST00000641733 KDM4CQ9H3R0 1056 aa10.31□□□□□ -0.76
CASC19-255ENST00000641733 FLIIQ13045 1269 aa10.29□□□□□ -0.76
CASC19-255ENST00000641733 PCDHB3Q9Y5E6 796 aa10.29□□□□□ -0.76
CASC19-255ENST00000641733 GRIPAP1Q4V328 841 aa10.28□□□□□ -0.76
CASC19-255ENST00000641733 USP46P62068 366 aa10.26□□□□□ -0.77
CASC19-255ENST00000641733 KDM4AO75164 1064 aa10.26□□□□□ -0.77
CASC19-255ENST00000641733 ITGBL1O95965 494 aaPredicted RBP10.26□□□□□ -0.77
CASC19-255ENST00000641733 NUTM1Q86Y26 1132 aa10.26□□□□□ -0.77
CASC19-255ENST00000641733 BEGAINQ9BUH8 593 aa10.26□□□□□ -0.77
CASC19-255ENST00000641733 IL21Q9HBE4 155 aa10.26□□□□□ -0.77
CASC19-255ENST00000641733 MS4A1P11836 297 aa10.25□□□□□ -0.77
CASC19-255ENST00000641733 ATP6V1AP38606 617 aa10.25□□□□□ -0.77
CASC19-255ENST00000641733 FUT2Q10981 343 aa10.25□□□□□ -0.77
CASC19-255ENST00000641733 DIXDC1Q155Q3 683 aa10.25□□□□□ -0.77
CASC19-255ENST00000641733 MTRQ99707 1265 aa10.25□□□□□ -0.77
CASC19-255ENST00000641733 KCNC4Q03721 635 aa10.24□□□□□ -0.77
CASC19-255ENST00000641733 C1orf115Q9H7X2 142 aa10.24□□□□□ -0.77
CASC19-255ENST00000641733 ARID3CA6NKF2 412 aa10.23□□□□□ -0.77
CASC19-255ENST00000641733 NR1I2O75469 434 aa10.23□□□□□ -0.77
CASC19-255ENST00000641733 TJAP1Q5JTD0 557 aa10.23□□□□□ -0.77
CASC19-255ENST00000641733 PLA2G2EQ9NZK7 142 aa10.23□□□□□ -0.77
CASC19-255ENST00000641733 COPS2P61201 443 aa10.22□□□□□ -0.77
CASC19-255ENST00000641733 BLOC1S3Q6QNY0 202 aa10.21□□□□□ -0.78
CASC19-255ENST00000641733 DDRGK1Q96HY6 314 aa10.21□□□□□ -0.78
CASC19-255ENST00000641733 IFFO2Q5TF58 517 aa10.2□□□□□ -0.78
CASC19-255ENST00000641733 PUS10Q3MIT2 529 aaKnown RBP10.19□□□□□ -0.78
CASC19-255ENST00000641733 MORN1Q5T089 497 aa10.19□□□□□ -0.78
CASC19-255ENST00000641733 HOXA2O43364 376 aa10.18□□□□□ -0.78
CASC19-255ENST00000641733 ZPR1O75312 459 aa10.18□□□□□ -0.78
CASC19-255ENST00000641733 SPIRE2Q8WWL2 714 aa10.18□□□□□ -0.78
CASC19-255ENST00000641733 Q3C1V9 767 aa10.16□□□□□ -0.78
CASC19-255ENST00000641733 SCUBE3Q8IX30 993 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms