RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 VPS8Q8N3P4 1428 aa11.76□□□□□ -0.53
PHGDH-225ENST00000641720 E9PCH4 1651 aa11.75□□□□□ -0.53
PHGDH-225ENST00000641720 TSPY4P0CV99 314 aa11.75□□□□□ -0.53
PHGDH-225ENST00000641720 TSPY10P0CW01 314 aa11.75□□□□□ -0.53
PHGDH-225ENST00000641720 JCADQ9P266 1359 aa11.75□□□□□ -0.53
PHGDH-225ENST00000641720 IDI1Q13907 227 aa11.74□□□□□ -0.53
PHGDH-225ENST00000641720 RBM33Q96EV2 1170 aaKnown RBP11.74□□□□□ -0.53
PHGDH-225ENST00000641720 DAPK1P53355 1430 aa11.74□□□□□ -0.53
PHGDH-225ENST00000641720 CDK12Q9NYV4 1490 aaPredicted RBP11.74□□□□□ -0.53
PHGDH-225ENST00000641720 UNC13BO14795 1591 aa11.73□□□□□ -0.53
PHGDH-225ENST00000641720 LAMC1P11047 1609 aa11.73□□□□□ -0.53
PHGDH-225ENST00000641720 KANK4Q5T7N3 995 aaPredicted RBP11.73□□□□□ -0.53
PHGDH-225ENST00000641720 ADAMTS13Q76LX8 1427 aa11.73□□□□□ -0.53
PHGDH-225ENST00000641720 UPF1Q92900 1129 aaKnown RBP eCLIP11.73□□□□□ -0.53
PHGDH-225ENST00000641720 ADGRL2O95490 1459 aa11.72□□□□□ -0.53
PHGDH-225ENST00000641720 RPRD2Q5VT52 1461 aaKnown RBP11.71□□□□□ -0.53
PHGDH-225ENST00000641720 PLEKHG1Q9ULL1 1385 aa11.71□□□□□ -0.53
PHGDH-225ENST00000641720 SLC26A8Q96RN1 970 aa11.71□□□□□ -0.53
PHGDH-225ENST00000641720 NALCNQ8IZF0 1738 aa11.71□□□□□ -0.54
PHGDH-225ENST00000641720 NCOA3Q9Y6Q9 1424 aa11.7□□□□□ -0.54
PHGDH-225ENST00000641720 MSH6P52701 1360 aa11.69□□□□□ -0.54
PHGDH-225ENST00000641720 EID1Q9Y6B2 187 aa11.69□□□□□ -0.54
PHGDH-225ENST00000641720 PROSER2Q86WR7 435 aaPredicted RBP11.68□□□□□ -0.54
PHGDH-225ENST00000641720 SLAIN2Q9P270 581 aa11.68□□□□□ -0.54
PHGDH-225ENST00000641720 PTPRUQ92729 1446 aa11.68□□□□□ -0.54
PHGDH-225ENST00000641720 IQGAP3Q86VI3 1631 aa11.68□□□□□ -0.54
PHGDH-225ENST00000641720 ASXL1Q8IXJ9 1541 aa11.67□□□□□ -0.54
PHGDH-225ENST00000641720 MARF1Q9Y4F3 1742 aaKnown RBP11.67□□□□□ -0.54
PHGDH-225ENST00000641720 SPATA31A6Q5VVP1 1343 aa11.66□□□□□ -0.54
PHGDH-225ENST00000641720 RGS12O14924 1447 aa11.66□□□□□ -0.54
PHGDH-225ENST00000641720 RIMS2Q9UQ26 1411 aa11.66□□□□□ -0.54
PHGDH-225ENST00000641720 TRPM2O94759 1503 aa11.65□□□□□ -0.54
PHGDH-225ENST00000641720 SETBP1Q9Y6X0 1596 aa11.65□□□□□ -0.54
PHGDH-225ENST00000641720 SETD5Q9C0A6 1442 aa11.64□□□□□ -0.55
PHGDH-225ENST00000641720 RRP7BPQ9NSQ0 103 aa11.64□□□□□ -0.55
PHGDH-225ENST00000641720 SPHKAPQ2M3C7 1700 aa11.63□□□□□ -0.55
PHGDH-225ENST00000641720 DCCP43146 1447 aa11.63□□□□□ -0.55
PHGDH-225ENST00000641720 MST1RQ04912 1400 aa11.63□□□□□ -0.55
PHGDH-225ENST00000641720 COL22A1Q8NFW1 1626 aaPredicted RBP11.62□□□□□ -0.55
PHGDH-225ENST00000641720 KANK1Q14678 1352 aa11.62□□□□□ -0.55
PHGDH-225ENST00000641720 PIK3R4Q99570 1358 aa11.62□□□□□ -0.55
PHGDH-225ENST00000641720 SLC52A1Q9NWF4 448 aa11.61□□□□□ -0.55
PHGDH-225ENST00000641720 TBX22Q9Y458 520 aa11.61□□□□□ -0.55
PHGDH-225ENST00000641720 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.6□□□□□ -0.55
PHGDH-225ENST00000641720 BRWD3Q6RI45 1802 aa11.6□□□□□ -0.55
PHGDH-225ENST00000641720 ANKRD30AQ9BXX3 1397 aa11.59□□□□□ -0.55
PHGDH-225ENST00000641720 ZNF772Q68DY9 489 aaPredicted RBP11.59□□□□□ -0.55
PHGDH-225ENST00000641720 BRINP3Q76B58 766 aa11.59□□□□□ -0.55
PHGDH-225ENST00000641720 TRIM52Q96A61 297 aa11.59□□□□□ -0.55
PHGDH-225ENST00000641720 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.59□□□□□ -0.55
PHGDH-225ENST00000641720 STAG3Q9UJ98 1225 aa11.57□□□□□ -0.56
PHGDH-225ENST00000641720 ANKRD50Q9ULJ7 1429 aa11.57□□□□□ -0.56
PHGDH-225ENST00000641720 AFF2P51816 1311 aa11.57□□□□□ -0.56
PHGDH-225ENST00000641720 PNPLA6Q8IY17 1366 aa11.56□□□□□ -0.56
PHGDH-225ENST00000641720 NEXMIFQ5QGS0 1516 aa11.55□□□□□ -0.56
PHGDH-225ENST00000641720 C19orf44Q9H6X5 657 aa11.55□□□□□ -0.56
PHGDH-225ENST00000641720 ADGRL3Q9HAR2 1447 aa11.54□□□□□ -0.56
PHGDH-225ENST00000641720 CLTCL1P53675 1640 aa11.54□□□□□ -0.56
PHGDH-225ENST00000641720 RXRBP28702 533 aa11.54□□□□□ -0.56
PHGDH-225ENST00000641720 CADPS2Q86UW7 1296 aa11.54□□□□□ -0.56
PHGDH-225ENST00000641720 KIF1BO60333 1816 aa11.53□□□□□ -0.56
PHGDH-225ENST00000641720 PRAG1Q86YV5 1406 aa11.53□□□□□ -0.56
PHGDH-225ENST00000641720 CHIC2Q9UKJ5 165 aa11.53□□□□□ -0.56
PHGDH-225ENST00000641720 LRP5O75197 1615 aa11.52□□□□□ -0.57
PHGDH-225ENST00000641720 PPLO60437 1756 aa11.51□□□□□ -0.57
PHGDH-225ENST00000641720 ATRNO75882 1429 aa11.51□□□□□ -0.57
PHGDH-225ENST00000641720 GLI3P10071 1580 aa11.5□□□□□ -0.57
PHGDH-225ENST00000641720 ABCA3Q99758 1704 aa11.5□□□□□ -0.57
PHGDH-225ENST00000641720 METP08581 1390 aa11.5□□□□□ -0.57
PHGDH-225ENST00000641720 MYOM2P54296 1465 aa11.5□□□□□ -0.57
PHGDH-225ENST00000641720 MEX3CQ5U5Q3 659 aaKnown RBP11.49□□□□□ -0.57
PHGDH-225ENST00000641720 NUTM2DQ5VT03 806 aaPredicted RBP11.49□□□□□ -0.57
PHGDH-225ENST00000641720 DDX17Q92841 729 aaKnown RBP11.49□□□□□ -0.57
PHGDH-225ENST00000641720 AMOTL2Q9Y2J4 779 aa11.49□□□□□ -0.57
PHGDH-225ENST00000641720 C1orf167Q5SNV9 1468 aa11.49□□□□□ -0.57
PHGDH-225ENST00000641720 RBM6P78332 1123 aaKnown RBP11.48□□□□□ -0.57
PHGDH-225ENST00000641720 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.48□□□□□ -0.57
PHGDH-225ENST00000641720 RGPD8O14715 1765 aaPredicted RBP11.48□□□□□ -0.57
PHGDH-225ENST00000641720 IFT172Q9UG01 1749 aa11.47□□□□□ -0.57
PHGDH-225ENST00000641720 PTCH1Q13635 1447 aa11.47□□□□□ -0.57
PHGDH-225ENST00000641720 NUTM2BA6NNL0 878 aaPredicted RBP11.47□□□□□ -0.57
PHGDH-225ENST00000641720 NUTM2EB1AL46 878 aaPredicted RBP11.47□□□□□ -0.57
PHGDH-225ENST00000641720 ATF3P18847 181 aa11.47□□□□□ -0.57
PHGDH-225ENST00000641720 APLP2Q06481 763 aa11.47□□□□□ -0.57
PHGDH-225ENST00000641720 NUTM2AQ8IVF1 878 aaPredicted RBP11.47□□□□□ -0.57
PHGDH-225ENST00000641720 BCL9LQ86UU0 1499 aa11.46□□□□□ -0.57
PHGDH-225ENST00000641720 PXDNQ92626 1479 aa11.46□□□□□ -0.57
PHGDH-225ENST00000641720 SOS2Q07890 1332 aaPredicted RBP11.46□□□□□ -0.57
PHGDH-225ENST00000641720 CDC42BPGQ6DT37 1551 aa11.45□□□□□ -0.58
PHGDH-225ENST00000641720 ROCK1Q13464 1354 aa11.45□□□□□ -0.58
PHGDH-225ENST00000641720 PPP1R15AO75807 674 aaPredicted RBP11.45□□□□□ -0.58
PHGDH-225ENST00000641720 QTRT2Q9H974 415 aaKnown RBP11.45□□□□□ -0.58
PHGDH-225ENST00000641720 KNDC1Q76NI1 1749 aa11.45□□□□□ -0.58
PHGDH-225ENST00000641720 PLCH1Q4KWH8 1693 aa11.45□□□□□ -0.58
PHGDH-225ENST00000641720 ATAD2Q6PL18 1390 aa11.44□□□□□ -0.58
PHGDH-225ENST00000641720 PPARGC1BQ86YN6 1023 aaKnown RBP11.44□□□□□ -0.58
PHGDH-225ENST00000641720 LRRC59Q96AG4 307 aaKnown RBP11.44□□□□□ -0.58
PHGDH-225ENST00000641720 BCANQ96GW7 911 aa11.44□□□□□ -0.58
PHGDH-225ENST00000641720 FMN2Q9NZ56 1722 aa11.43□□□□□ -0.58
PHGDH-225ENST00000641720 NWD2Q9ULI1 1742 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 178.5 ms