RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 NEXMIFQ5QGS0 1516 aa28.27■■■□□ 2.12
PHGDH-210ENST00000641115 TRPM1Q7Z4N2 1603 aa28.23■■■□□ 2.11
PHGDH-210ENST00000641115 RALGAPBQ86X10 1494 aa28.21■■■□□ 2.11
PHGDH-210ENST00000641115 SETD1BQ9UPS6 1966 aaKnown RBP28.2■■■□□ 2.11
PHGDH-210ENST00000641115 ZNF142P52746 1687 aaPredicted RBP28.18■■■□□ 2.1
PHGDH-210ENST00000641115 CEP170BQ9Y4F5 1589 aaPredicted RBP28.18■■■□□ 2.1
PHGDH-210ENST00000641115 NRXN1Q9ULB1 1477 aa28.18■■■□□ 2.1
PHGDH-210ENST00000641115 VGFO15240 615 aaPredicted RBP28.17■■■□□ 2.1
PHGDH-210ENST00000641115 KIAA1210Q9ULL0 1709 aa28.17■■■□□ 2.1
PHGDH-210ENST00000641115 ADGRF5Q8IZF2 1346 aa28.15■■■□□ 2.1
PHGDH-210ENST00000641115 ZFYVE9O95405 1425 aa28.15■■■□□ 2.1
PHGDH-210ENST00000641115 RIMS2Q9UQ26 1411 aa28.14■■■□□ 2.09
PHGDH-210ENST00000641115 PIK3C2GO75747 1445 aa28.12■■■□□ 2.09
PHGDH-210ENST00000641115 ROCK2O75116 1388 aaKnown RBP28.12■■■□□ 2.09
PHGDH-210ENST00000641115 TMEM2Q9UHN6 1383 aa28.11■■■□□ 2.09
PHGDH-210ENST00000641115 NUTM2DQ5VT03 806 aaPredicted RBP28.1■■■□□ 2.09
PHGDH-210ENST00000641115 LAMC1P11047 1609 aa28.1■■■□□ 2.09
PHGDH-210ENST00000641115 KDM4FA0A1W2PPD8 638 aa28.1■■■□□ 2.09
PHGDH-210ENST00000641115 HDGFP51858 240 aaKnown RBP28.09■■■□□ 2.09
PHGDH-210ENST00000641115 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.08■■■□□ 2.09
PHGDH-210ENST00000641115 SLIT1O75093 1534 aa28.07■■■□□ 2.08
PHGDH-210ENST00000641115 THEMISQ8N1K5 641 aaPredicted RBP28.07■■■□□ 2.08
PHGDH-210ENST00000641115 CARD11Q9BXL7 1154 aa28.06■■■□□ 2.08
PHGDH-210ENST00000641115 GPRASP1Q5JY77 1395 aa28.05■■■□□ 2.08
PHGDH-210ENST00000641115 ARHGAP23Q9P227 1491 aa28.04■■■□□ 2.08
PHGDH-210ENST00000641115 EIF4G2P78344 907 aaKnown RBP eCLIP28.03■■■□□ 2.087e-14■■■■■ 63.8
PHGDH-210ENST00000641115 NBPF1Q3BBV0 1214 aa28.03■■■□□ 2.08
PHGDH-210ENST00000641115 SETBP1Q9Y6X0 1596 aa28.02■■■□□ 2.08
PHGDH-210ENST00000641115 ZNF316A6NFI3 1004 aaPredicted RBP28.01■■■□□ 2.07
PHGDH-210ENST00000641115 CFAP70Q5T0N1 1121 aa28.01■■■□□ 2.07
PHGDH-210ENST00000641115 USP47Q96K76 1375 aa28■■■□□ 2.07
PHGDH-210ENST00000641115 C14orf93Q9H972 538 aaKnown RBP28■■■□□ 2.07
PHGDH-210ENST00000641115 EID1Q9Y6B2 187 aa28■■■□□ 2.07
PHGDH-210ENST00000641115 IQGAP1P46940 1657 aa27.97■■■□□ 2.07
PHGDH-210ENST00000641115 HSPA5P11021 654 aaKnown RBP27.96■■■□□ 2.07
PHGDH-210ENST00000641115 TXNDC2Q86VQ3 553 aa27.96■■■□□ 2.07
PHGDH-210ENST00000641115 ALKQ9UM73 1620 aa27.96■■■□□ 2.07
PHGDH-210ENST00000641115 NRXN3Q9Y4C0 1643 aa27.96■■■□□ 2.07
PHGDH-210ENST00000641115 SCAF11Q99590 1463 aaKnown RBP27.94■■■□□ 2.06
PHGDH-210ENST00000641115 ADGRB1O14514 1584 aa27.94■■■□□ 2.06
PHGDH-210ENST00000641115 PLEKHG1Q9ULL1 1385 aa27.93■■■□□ 2.06
PHGDH-210ENST00000641115 SETD1AO15047 1707 aaKnown RBP27.92■■■□□ 2.06
PHGDH-210ENST00000641115 LTKP29376 864 aa27.92■■■□□ 2.06
PHGDH-210ENST00000641115 SENP3Q9H4L4 574 aaPredicted RBP27.92■■■□□ 2.06
PHGDH-210ENST00000641115 HIRIP3Q9BW71 556 aaPredicted RBP27.91■■■□□ 2.06
PHGDH-210ENST00000641115 BCANQ96GW7 911 aa27.89■■■□□ 2.06
PHGDH-210ENST00000641115 POLR1AO95602 1720 aaPredicted RBP27.89■■■□□ 2.06
PHGDH-210ENST00000641115 ASXL1Q8IXJ9 1541 aa27.88■■■□□ 2.05
PHGDH-210ENST00000641115 EIF3AQ14152 1382 aaKnown RBP27.87■■■□□ 2.05
PHGDH-210ENST00000641115 ANKLE2Q86XL3 938 aa27.86■■■□□ 2.05
PHGDH-210ENST00000641115 TMEM132EQ6IEE7 984 aa27.85■■■□□ 2.05
PHGDH-210ENST00000641115 DIP2AQ14689 1571 aa27.84■■■□□ 2.05
PHGDH-210ENST00000641115 ST20-MTHFSA0A0A6YYL1 179 aa27.82■■■□□ 2.04
PHGDH-210ENST00000641115 ADAMTS13Q76LX8 1427 aa27.82■■■□□ 2.04
PHGDH-210ENST00000641115 ARHGEF28Q8N1W1 1705 aaKnown RBP27.81■■■□□ 2.04
PHGDH-210ENST00000641115 LMTK3Q96Q04 1460 aa27.79■■■□□ 2.04
PHGDH-210ENST00000641115 YTHDC2Q9H6S0 1430 aaKnown RBP27.79■■■□□ 2.04
PHGDH-210ENST00000641115 MED14O60244 1454 aa27.78■■■□□ 2.04
PHGDH-210ENST00000641115 TRAK1Q9UPV9 953 aa27.77■■■□□ 2.04
PHGDH-210ENST00000641115 METP08581 1390 aa27.76■■■□□ 2.03
PHGDH-210ENST00000641115 KNDC1Q76NI1 1749 aa27.75■■■□□ 2.03
PHGDH-210ENST00000641115 QRICH2Q9H0J4 1663 aa27.74■■■□□ 2.03
PHGDH-210ENST00000641115 NPHP4O75161 1426 aaPredicted RBP27.74■■■□□ 2.03
PHGDH-210ENST00000641115 SLC26A8Q96RN1 970 aa27.74■■■□□ 2.03
PHGDH-210ENST00000641115 STK26Q9P289 416 aa27.74■■■□□ 2.03
PHGDH-210ENST00000641115 LRPPRCP42704 1394 aaKnown RBP27.73■■■□□ 2.03
PHGDH-210ENST00000641115 TBX22Q9Y458 520 aa27.73■■■□□ 2.03
PHGDH-210ENST00000641115 DLC1Q96QB1 1528 aa27.71■■■□□ 2.03
PHGDH-210ENST00000641115 CENPJQ9HC77 1338 aaPredicted RBP27.7■■■□□ 2.03
PHGDH-210ENST00000641115 NCKAP5LQ9HCH0 1330 aa27.69■■■□□ 2.02
PHGDH-210ENST00000641115 TESK2Q96S53 571 aa27.69■■■□□ 2.02
PHGDH-210ENST00000641115 ABCC11Q96J66 1382 aa27.68■■■□□ 2.02
PHGDH-210ENST00000641115 HSPA2P54652 639 aa27.68■■■□□ 2.02
PHGDH-210ENST00000641115 CPS1P31327 1500 aa27.67■■■□□ 2.02
PHGDH-210ENST00000641115 SBNO2Q9Y2G9 1366 aa27.67■■■□□ 2.02
PHGDH-210ENST00000641115 TECPR2O15040 1411 aa27.67■■■□□ 2.02
PHGDH-210ENST00000641115 SLC24A1O60721 1099 aa27.67■■■□□ 2.02
PHGDH-210ENST00000641115 PIK3R4Q99570 1358 aa27.66■■■□□ 2.02
PHGDH-210ENST00000641115 WASHC2AQ641Q2 1341 aa27.66■■■□□ 2.02
PHGDH-210ENST00000641115 CCDC7Q96M83 1385 aa27.65■■■□□ 2.02
PHGDH-210ENST00000641115 TMF1P82094 1093 aa27.65■■■□□ 2.02
PHGDH-210ENST00000641115 C11orf95C9JLR9 678 aaPredicted RBP27.63■■■□□ 2.01
PHGDH-210ENST00000641115 KIF7Q2M1P5 1343 aa27.63■■■□□ 2.01
PHGDH-210ENST00000641115 XRN1Q8IZH2 1706 aaKnown RBP27.62■■■□□ 2.01
PHGDH-210ENST00000641115 PRAM1Q96QH2 718 aa27.62■■■□□ 2.01
PHGDH-210ENST00000641115 POGKQ9P215 609 aa27.62■■■□□ 2.01
PHGDH-210ENST00000641115 CHD2O14647 1828 aaKnown RBP27.62■■■□□ 2.01
PHGDH-210ENST00000641115 STRCQ7RTU9 1775 aa27.61■■■□□ 2.01
PHGDH-210ENST00000641115 PTPRUQ92729 1446 aa27.61■■■□□ 2.01
PHGDH-210ENST00000641115 FAM135BQ49AJ0 1406 aa27.6■■■□□ 2.01
PHGDH-210ENST00000641115 DISP3Q9P2K9 1392 aa27.6■■■□□ 2.01
PHGDH-210ENST00000641115 SIRT1Q96EB6 747 aa27.58■■■□□ 2.01
PHGDH-210ENST00000641115 CDCA8Q53HL2 280 aa27.57■■■□□ 2
PHGDH-210ENST00000641115 AMOTL2Q9Y2J4 779 aa27.57■■■□□ 2
PHGDH-210ENST00000641115 PTCH1Q13635 1447 aa27.57■■■□□ 2
PHGDH-210ENST00000641115 SAFB2Q14151 953 aaKnown RBP eCLIP27.56■■■□□ 2
PHGDH-210ENST00000641115 POLR3GLQ9BT43 218 aa27.56■■■□□ 2
PHGDH-210ENST00000641115 DIEXFQ68CQ4 756 aaKnown RBP27.55■■■□□ 2
PHGDH-210ENST00000641115 ROBO2Q9HCK4 1378 aa27.55■■■□□ 2
PHGDH-210ENST00000641115 DDX10Q13206 875 aaKnown RBP27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms