RNA–Protein interactions for RNA: ENST00000640840.1

PRICKLE1-220, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 5

Gene PRICKLE1, Length 3,735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-220ENST00000640840 HSPA2P54652 639 aa8.59□□□□□ -1.03
PRICKLE1-220ENST00000640840 BCL11AQ9H165 835 aa8.59□□□□□ -1.03
PRICKLE1-220ENST00000640840 NEXMIFQ5QGS0 1516 aa8.59□□□□□ -1.03
PRICKLE1-220ENST00000640840 SLC52A1Q9NWF4 448 aa8.59□□□□□ -1.03
PRICKLE1-220ENST00000640840 IDI1Q13907 227 aa8.58□□□□□ -1.04
PRICKLE1-220ENST00000640840 TMEM2Q9UHN6 1383 aa8.58□□□□□ -1.04
PRICKLE1-220ENST00000640840 SCAF11Q99590 1463 aaKnown RBP8.57□□□□□ -1.04
PRICKLE1-220ENST00000640840 PKD2Q13563 968 aa8.57□□□□□ -1.04
PRICKLE1-220ENST00000640840 PLPPR3Q6T4P5 718 aa8.57□□□□□ -1.04
PRICKLE1-220ENST00000640840 NWD1Q149M9 1564 aa8.57□□□□□ -1.04
PRICKLE1-220ENST00000640840 SETBP1Q9Y6X0 1596 aa8.57□□□□□ -1.04
PRICKLE1-220ENST00000640840 SPATA31E1Q6ZUB1 1445 aa8.57□□□□□ -1.04
PRICKLE1-220ENST00000640840 XIRP1Q702N8 1843 aaKnown RBP8.57□□□□□ -1.04
PRICKLE1-220ENST00000640840 DIP2AQ14689 1571 aa8.56□□□□□ -1.04
PRICKLE1-220ENST00000640840 MPHOSPH9Q99550 1183 aa8.56□□□□□ -1.04
PRICKLE1-220ENST00000640840 CHD2O14647 1828 aaKnown RBP8.56□□□□□ -1.04
PRICKLE1-220ENST00000640840 THEMISQ8N1K5 641 aaPredicted RBP8.55□□□□□ -1.04
PRICKLE1-220ENST00000640840 NPHP4O75161 1426 aaPredicted RBP8.55□□□□□ -1.04
PRICKLE1-220ENST00000640840 ANKRD30BQ9BXX2 1392 aa8.54□□□□□ -1.04
PRICKLE1-220ENST00000640840 NCKAP5LQ9HCH0 1330 aa8.54□□□□□ -1.04
PRICKLE1-220ENST00000640840 LTKP29376 864 aa8.54□□□□□ -1.04
PRICKLE1-220ENST00000640840 IQSEC2Q5JU85 1478 aa8.54□□□□□ -1.04
PRICKLE1-220ENST00000640840 NRXN1Q9ULB1 1477 aa8.54□□□□□ -1.04
PRICKLE1-220ENST00000640840 RIMS2Q9UQ26 1411 aa8.53□□□□□ -1.04
PRICKLE1-220ENST00000640840 PLEKHG1Q9ULL1 1385 aa8.53□□□□□ -1.04
PRICKLE1-220ENST00000640840 CCER1Q8TC90 406 aaPredicted RBP8.53□□□□□ -1.04
PRICKLE1-220ENST00000640840 XRN1Q8IZH2 1706 aaKnown RBP8.53□□□□□ -1.04
PRICKLE1-220ENST00000640840 SLC4A1APQ9BWU0 796 aaKnown RBP8.52□□□□□ -1.05
PRICKLE1-220ENST00000640840 ADAMTS13Q76LX8 1427 aa8.52□□□□□ -1.05
PRICKLE1-220ENST00000640840 DMRT2Q9Y5R5 561 aa8.52□□□□□ -1.05
PRICKLE1-220ENST00000640840 CPS1P31327 1500 aa8.52□□□□□ -1.05
PRICKLE1-220ENST00000640840 PRAG1Q86YV5 1406 aa8.51□□□□□ -1.05
PRICKLE1-220ENST00000640840 ALKQ9UM73 1620 aa8.51□□□□□ -1.05
PRICKLE1-220ENST00000640840 ANKLE2Q86XL3 938 aa8.51□□□□□ -1.05
PRICKLE1-220ENST00000640840 MYOM2P54296 1465 aa8.5□□□□□ -1.05
PRICKLE1-220ENST00000640840 TRIM52Q96A61 297 aa8.5□□□□□ -1.05
PRICKLE1-220ENST00000640840 FOXD1Q16676 465 aa8.5□□□□□ -1.05
PRICKLE1-220ENST00000640840 KNDC1Q76NI1 1749 aa8.49□□□□□ -1.05
PRICKLE1-220ENST00000640840 CCDC144AA2RUR9 1427 aa8.49□□□□□ -1.05
PRICKLE1-220ENST00000640840 LAMC1P11047 1609 aa8.49□□□□□ -1.05
PRICKLE1-220ENST00000640840 RPGRIP1LQ68CZ1 1315 aa8.48□□□□□ -1.05
PRICKLE1-220ENST00000640840 DHX57Q6P158 1386 aaKnown RBP8.48□□□□□ -1.05
PRICKLE1-220ENST00000640840 ASXL1Q8IXJ9 1541 aa8.48□□□□□ -1.05
PRICKLE1-220ENST00000640840 NKTRP30414 1462 aaKnown RBP8.47□□□□□ -1.05
PRICKLE1-220ENST00000640840 LRRC7Q96NW7 1537 aa8.47□□□□□ -1.05
PRICKLE1-220ENST00000640840 KIAA1210Q9ULL0 1709 aa8.47□□□□□ -1.05
PRICKLE1-220ENST00000640840 PIK3C2GO75747 1445 aa8.47□□□□□ -1.05
PRICKLE1-220ENST00000640840 TXNDC2Q86VQ3 553 aa8.47□□□□□ -1.05
PRICKLE1-220ENST00000640840 PIK3R4Q99570 1358 aa8.46□□□□□ -1.05
PRICKLE1-220ENST00000640840 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.46□□□□□ -1.05
PRICKLE1-220ENST00000640840 PTPRUQ92729 1446 aa8.46□□□□□ -1.06
PRICKLE1-220ENST00000640840 ZNF335Q9H4Z2 1342 aaPredicted RBP8.45□□□□□ -1.06
PRICKLE1-220ENST00000640840 EID1Q9Y6B2 187 aa8.45□□□□□ -1.06
PRICKLE1-220ENST00000640840 ADGRB1O14514 1584 aa8.45□□□□□ -1.06
PRICKLE1-220ENST00000640840 TBX22Q9Y458 520 aa8.44□□□□□ -1.06
PRICKLE1-220ENST00000640840 RTN4Q9NQC3 1192 aaKnown RBP8.43□□□□□ -1.06
PRICKLE1-220ENST00000640840 MIER1Q8N108 512 aa8.43□□□□□ -1.06
PRICKLE1-220ENST00000640840 NALCNQ8IZF0 1738 aa8.43□□□□□ -1.06
PRICKLE1-220ENST00000640840 TECPR2O15040 1411 aa8.43□□□□□ -1.06
PRICKLE1-220ENST00000640840 NCOA3Q9Y6Q9 1424 aa8.43□□□□□ -1.06
PRICKLE1-220ENST00000640840 HDGFP51858 240 aaKnown RBP8.42□□□□□ -1.06
PRICKLE1-220ENST00000640840 ANP32EQ9BTT0 268 aa8.42□□□□□ -1.06
PRICKLE1-220ENST00000640840 METP08581 1390 aa8.42□□□□□ -1.06
PRICKLE1-220ENST00000640840 STAG3Q9UJ98 1225 aa8.42□□□□□ -1.06
PRICKLE1-220ENST00000640840 CERKQ8TCT0 537 aa8.42□□□□□ -1.06
PRICKLE1-220ENST00000640840 PTCH1Q13635 1447 aa8.42□□□□□ -1.06
PRICKLE1-220ENST00000640840 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.41□□□□□ -1.06
PRICKLE1-220ENST00000640840 TRPM1Q7Z4N2 1603 aa8.41□□□□□ -1.06
PRICKLE1-220ENST00000640840 KCNA6P17658 529 aa8.41□□□□□ -1.06
PRICKLE1-220ENST00000640840 ARXQ96QS3 562 aa8.41□□□□□ -1.06
PRICKLE1-220ENST00000640840 ADGRF5Q8IZF2 1346 aa8.41□□□□□ -1.06
PRICKLE1-220ENST00000640840 DLC1Q96QB1 1528 aa8.4□□□□□ -1.06
PRICKLE1-220ENST00000640840 ARHGEF28Q8N1W1 1705 aaKnown RBP8.4□□□□□ -1.06
PRICKLE1-220ENST00000640840 VGFO15240 615 aaPredicted RBP8.4□□□□□ -1.07
PRICKLE1-220ENST00000640840 CHGAP10645 457 aaKnown RBP8.39□□□□□ -1.07
PRICKLE1-220ENST00000640840 STAC3Q96MF2 364 aa8.39□□□□□ -1.07
PRICKLE1-220ENST00000640840 SLC26A8Q96RN1 970 aa8.39□□□□□ -1.07
PRICKLE1-220ENST00000640840 NUTM2DQ5VT03 806 aaPredicted RBP8.38□□□□□ -1.07
PRICKLE1-220ENST00000640840 ADGRB2O60241 1585 aa8.38□□□□□ -1.07
PRICKLE1-220ENST00000640840 EIF5BO60841 1220 aaKnown RBP8.38□□□□□ -1.07
PRICKLE1-220ENST00000640840 ZNF326Q5BKZ1 582 aaKnown RBP8.38□□□□□ -1.07
PRICKLE1-220ENST00000640840 C14orf93Q9H972 538 aaKnown RBP8.37□□□□□ -1.07
PRICKLE1-220ENST00000640840 TSHZ2Q9NRE2 1034 aa8.37□□□□□ -1.07
PRICKLE1-220ENST00000640840 DCCP43146 1447 aa8.37□□□□□ -1.07
PRICKLE1-220ENST00000640840 CDC42BPGQ6DT37 1551 aa8.37□□□□□ -1.07
PRICKLE1-220ENST00000640840 ZNF316A6NFI3 1004 aaPredicted RBP8.36□□□□□ -1.07
PRICKLE1-220ENST00000640840 LRPPRCP42704 1394 aaKnown RBP8.36□□□□□ -1.07
PRICKLE1-220ENST00000640840 FMN2Q9NZ56 1722 aa8.36□□□□□ -1.07
PRICKLE1-220ENST00000640840 PPP1R15AO75807 674 aaPredicted RBP8.36□□□□□ -1.07
PRICKLE1-220ENST00000640840 TMEM94Q12767 1356 aa8.36□□□□□ -1.07
PRICKLE1-220ENST00000640840 ABCC11Q96J66 1382 aa8.36□□□□□ -1.07
PRICKLE1-220ENST00000640840 FBXO41Q8TF61 875 aa8.36□□□□□ -1.07
PRICKLE1-220ENST00000640840 FAM135BQ49AJ0 1406 aa8.35□□□□□ -1.07
PRICKLE1-220ENST00000640840 ROBO2Q9HCK4 1378 aa8.35□□□□□ -1.07
PRICKLE1-220ENST00000640840 YTHDC2Q9H6S0 1430 aaKnown RBP8.35□□□□□ -1.07
PRICKLE1-220ENST00000640840 ROBO1Q9Y6N7 1651 aa8.35□□□□□ -1.07
PRICKLE1-220ENST00000640840 SUPT16HQ9Y5B9 1047 aaKnown RBP8.34□□□□□ -1.07
PRICKLE1-220ENST00000640840 NHSL1Q5SYE7 1610 aa8.34□□□□□ -1.07
PRICKLE1-220ENST00000640840 RGL3Q3MIN7 710 aa8.34□□□□□ -1.07
PRICKLE1-220ENST00000640840 SIRT1Q96EB6 747 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms