RNA–Protein interactions for RNA: ENST00000640736.1

RTTN-221, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,132 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-221ENST00000640736 PIP4K2BP78356 416 aa20.95■□□□□ 0.94
RTTN-221ENST00000640736 TMEM131LA2VDJ0 1609 aa20.95■□□□□ 0.94
RTTN-221ENST00000640736 CHGAP10645 457 aaKnown RBP20.93■□□□□ 0.94
RTTN-221ENST00000640736 BCANQ96GW7 911 aa20.92■□□□□ 0.94
RTTN-221ENST00000640736 SLC26A8Q96RN1 970 aa20.91■□□□□ 0.94
RTTN-221ENST00000640736 XIRP1Q702N8 1843 aaKnown RBP20.9■□□□□ 0.94
RTTN-221ENST00000640736 RIMS2Q9UQ26 1411 aa20.9■□□□□ 0.94
RTTN-221ENST00000640736 MAPK8IP2Q13387 824 aaPredicted RBP20.9■□□□□ 0.94
RTTN-221ENST00000640736 ALKQ9UM73 1620 aa20.89■□□□□ 0.94
RTTN-221ENST00000640736 ZFYVE9O95405 1425 aa20.89■□□□□ 0.94
RTTN-221ENST00000640736 PPP1R15AO75807 674 aaPredicted RBP20.89■□□□□ 0.93
RTTN-221ENST00000640736 SPHKAPQ2M3C7 1700 aa20.89■□□□□ 0.93
RTTN-221ENST00000640736 NAIPQ13075 1403 aa20.88■□□□□ 0.93
RTTN-221ENST00000640736 DISP3Q9P2K9 1392 aa20.88■□□□□ 0.93
RTTN-221ENST00000640736 HSPA1LP34931 641 aa20.85■□□□□ 0.93
RTTN-221ENST00000640736 HDGFP51858 240 aaKnown RBP20.85■□□□□ 0.93
RTTN-221ENST00000640736 PLEKHG1Q9ULL1 1385 aa20.85■□□□□ 0.93
RTTN-221ENST00000640736 KCNA6P17658 529 aa20.84■□□□□ 0.93
RTTN-221ENST00000640736 NUTM2DQ5VT03 806 aaPredicted RBP20.84■□□□□ 0.93
RTTN-221ENST00000640736 NWD1Q149M9 1564 aa20.81■□□□□ 0.92
RTTN-221ENST00000640736 HFM1A2PYH4 1435 aa20.81■□□□□ 0.92
RTTN-221ENST00000640736 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.81■□□□□ 0.92
RTTN-221ENST00000640736 CHD2O14647 1828 aaKnown RBP20.81■□□□□ 0.92
RTTN-221ENST00000640736 PROSER2Q86WR7 435 aaPredicted RBP20.8■□□□□ 0.92
RTTN-221ENST00000640736 TRIM52Q96A61 297 aa20.8■□□□□ 0.92
RTTN-221ENST00000640736 TMEM94Q12767 1356 aa20.8■□□□□ 0.92
RTTN-221ENST00000640736 RBM33Q96EV2 1170 aaKnown RBP20.79■□□□□ 0.92
RTTN-221ENST00000640736 NKTRP30414 1462 aaKnown RBP20.78■□□□□ 0.92
RTTN-221ENST00000640736 CLTCL1P53675 1640 aa20.77■□□□□ 0.92
RTTN-221ENST00000640736 PPP4R3CPQ6ZMV5 832 aa20.76■□□□□ 0.91
RTTN-221ENST00000640736 TRPM2O94759 1503 aa20.75■□□□□ 0.91
RTTN-221ENST00000640736 ZNF326Q5BKZ1 582 aaKnown RBP20.75■□□□□ 0.91
RTTN-221ENST00000640736 KIF1BO60333 1816 aa20.75■□□□□ 0.91
RTTN-221ENST00000640736 ADAMTS13Q76LX8 1427 aa20.75■□□□□ 0.91
RTTN-221ENST00000640736 DIP2AQ14689 1571 aa20.74■□□□□ 0.91
RTTN-221ENST00000640736 TBX22Q9Y458 520 aa20.74■□□□□ 0.91
RTTN-221ENST00000640736 ILDR2Q71H61 639 aa20.72■□□□□ 0.91
RTTN-221ENST00000640736 SLC4A1APQ9BWU0 796 aaKnown RBP20.71■□□□□ 0.91
RTTN-221ENST00000640736 MED1Q15648 1581 aaPredicted RBP20.69■□□□□ 0.9
RTTN-221ENST00000640736 MSH6P52701 1360 aa20.69■□□□□ 0.9
RTTN-221ENST00000640736 NRXN3Q9Y4C0 1643 aa20.68■□□□□ 0.9
RTTN-221ENST00000640736 PIK3R4Q99570 1358 aa20.67■□□□□ 0.9
RTTN-221ENST00000640736 NEXMIFQ5QGS0 1516 aa20.67■□□□□ 0.9
RTTN-221ENST00000640736 SETBP1Q9Y6X0 1596 aa20.67■□□□□ 0.9
RTTN-221ENST00000640736 ROBO1Q9Y6N7 1651 aa20.67■□□□□ 0.9
RTTN-221ENST00000640736 FAM135BQ49AJ0 1406 aa20.65■□□□□ 0.9
RTTN-221ENST00000640736 C14orf37Q86TY3 774 aa20.64■□□□□ 0.89
RTTN-221ENST00000640736 PTPRUQ92729 1446 aa20.63■□□□□ 0.89
RTTN-221ENST00000640736 AMOTL2Q9Y2J4 779 aa20.63■□□□□ 0.89
RTTN-221ENST00000640736 XRN1Q8IZH2 1706 aaKnown RBP20.61■□□□□ 0.89
RTTN-221ENST00000640736 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.6■□□□□ 0.89
RTTN-221ENST00000640736 NCOA3Q9Y6Q9 1424 aa20.6■□□□□ 0.89
RTTN-221ENST00000640736 SLAIN2Q9P270 581 aa20.59■□□□□ 0.89
RTTN-221ENST00000640736 METP08581 1390 aa20.59■□□□□ 0.89
RTTN-221ENST00000640736 PPLO60437 1756 aa20.58■□□□□ 0.89
RTTN-221ENST00000640736 MPHOSPH9Q99550 1183 aa20.57■□□□□ 0.88
RTTN-221ENST00000640736 PHLPP1O60346 1717 aa20.56■□□□□ 0.88
RTTN-221ENST00000640736 SETD5Q9C0A6 1442 aa20.55■□□□□ 0.88
RTTN-221ENST00000640736 C19orf44Q9H6X5 657 aa20.55■□□□□ 0.88
RTTN-221ENST00000640736 CCDC144AA2RUR9 1427 aa20.54■□□□□ 0.88
RTTN-221ENST00000640736 VGFO15240 615 aaPredicted RBP20.54■□□□□ 0.88
RTTN-221ENST00000640736 ATF3P18847 181 aa20.54■□□□□ 0.88
RTTN-221ENST00000640736 RPGRIP1LQ68CZ1 1315 aa20.53■□□□□ 0.88
RTTN-221ENST00000640736 SETD1AO15047 1707 aaKnown RBP20.53■□□□□ 0.88
RTTN-221ENST00000640736 CADPS2Q86UW7 1296 aa20.53■□□□□ 0.88
RTTN-221ENST00000640736 SOCS7O14512 581 aa20.52■□□□□ 0.88
RTTN-221ENST00000640736 RGL3Q3MIN7 710 aa20.49■□□□□ 0.87
RTTN-221ENST00000640736 RAB3GAP2Q9H2M9 1393 aa20.48■□□□□ 0.87
RTTN-221ENST00000640736 NALCNQ8IZF0 1738 aa20.47■□□□□ 0.87
RTTN-221ENST00000640736 IFT172Q9UG01 1749 aa20.47■□□□□ 0.87
RTTN-221ENST00000640736 COL16A1Q07092 1604 aaPredicted RBP20.47■□□□□ 0.87
RTTN-221ENST00000640736 ACIN1Q9UKV3 1341 aaKnown RBP20.47■□□□□ 0.87
RTTN-221ENST00000640736 DCCP43146 1447 aa20.46■□□□□ 0.87
RTTN-221ENST00000640736 SPATA31E1Q6ZUB1 1445 aa20.46■□□□□ 0.87
RTTN-221ENST00000640736 ADGRL3Q9HAR2 1447 aa20.44■□□□□ 0.86
RTTN-221ENST00000640736 ADGRF5Q8IZF2 1346 aa20.44■□□□□ 0.86
RTTN-221ENST00000640736 AHDC1Q5TGY3 1603 aaPredicted RBP20.43■□□□□ 0.86
RTTN-221ENST00000640736 PTCH1Q13635 1447 aa20.43■□□□□ 0.86
RTTN-221ENST00000640736 ROBO2Q9HCK4 1378 aa20.42■□□□□ 0.86
RTTN-221ENST00000640736 JCADQ9P266 1359 aa20.42■□□□□ 0.86
RTTN-221ENST00000640736 MST1RQ04912 1400 aa20.42■□□□□ 0.86
RTTN-221ENST00000640736 BRINP3Q76B58 766 aa20.41■□□□□ 0.86
RTTN-221ENST00000640736 ASXL1Q8IXJ9 1541 aa20.4■□□□□ 0.86
RTTN-221ENST00000640736 ANKRD30BQ9BXX2 1392 aa20.4■□□□□ 0.86
RTTN-221ENST00000640736 RGS17Q9UGC6 210 aaPredicted RBP20.38■□□□□ 0.85
RTTN-221ENST00000640736 NHSL1Q5SYE7 1610 aa20.37■□□□□ 0.85
RTTN-221ENST00000640736 PRAG1Q86YV5 1406 aa20.36■□□□□ 0.85
RTTN-221ENST00000640736 SHPRHQ149N8 1683 aa20.36■□□□□ 0.85
RTTN-221ENST00000640736 STK26Q9P289 416 aa20.35■□□□□ 0.85
RTTN-221ENST00000640736 PIK3C2GO75747 1445 aa20.35■□□□□ 0.85
RTTN-221ENST00000640736 C1orf167Q5SNV9 1468 aa20.33■□□□□ 0.85
RTTN-221ENST00000640736 TMEM132EQ6IEE7 984 aa20.33■□□□□ 0.85
RTTN-221ENST00000640736 DDX17Q92841 729 aaKnown RBP20.32■□□□□ 0.84
RTTN-221ENST00000640736 KNDC1Q76NI1 1749 aa20.32■□□□□ 0.84
RTTN-221ENST00000640736 LRP6O75581 1613 aa20.31■□□□□ 0.84
RTTN-221ENST00000640736 SPATA31A6Q5VVP1 1343 aa20.31■□□□□ 0.84
RTTN-221ENST00000640736 LRPPRCP42704 1394 aaKnown RBP20.31■□□□□ 0.84
RTTN-221ENST00000640736 MYOM2P54296 1465 aa20.3■□□□□ 0.84
RTTN-221ENST00000640736 MEX3CQ5U5Q3 659 aaKnown RBP20.29■□□□□ 0.84
RTTN-221ENST00000640736 WAPLQ7Z5K2 1190 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms