RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 PAK3O75914 559 aaPredicted RBP10.12□□□□□ -0.79
NECAP1-227ENST00000640648 DDX49Q9Y6V7 483 aaKnown RBP10.12□□□□□ -0.79
NECAP1-227ENST00000640648 CADPSQ9ULU8 1353 aa10.12□□□□□ -0.79
NECAP1-227ENST00000640648 GGT6Q6P531 493 aa10.11□□□□□ -0.79
NECAP1-227ENST00000640648 CCDC9Q9Y3X0 531 aaKnown RBP10.11□□□□□ -0.79
NECAP1-227ENST00000640648 KIF7Q2M1P5 1343 aa10.11□□□□□ -0.79
NECAP1-227ENST00000640648 TRAK2O60296 914 aa10.11□□□□□ -0.79
NECAP1-227ENST00000640648 LEKR1Q6ZMV7 388 aa10.11□□□□□ -0.79
NECAP1-227ENST00000640648 RRP7AQ9Y3A4 280 aaKnown RBP10.11□□□□□ -0.79
NECAP1-227ENST00000640648 IGF1RP08069 1367 aa10.11□□□□□ -0.79
NECAP1-227ENST00000640648 CCDC94Q9BW85 323 aaPredicted RBP10.11□□□□□ -0.79
NECAP1-227ENST00000640648 BCL2L13Q9BXK5 485 aa10.11□□□□□ -0.79
NECAP1-227ENST00000640648 ATP6V1DQ9Y5K8 247 aa10.1□□□□□ -0.79
NECAP1-227ENST00000640648 PAIP2Q9BPZ3 127 aaKnown RBP10.1□□□□□ -0.79
NECAP1-227ENST00000640648 ERCC6Q03468 1493 aa10.1□□□□□ -0.79
NECAP1-227ENST00000640648 MBD3O95983 291 aa10.1□□□□□ -0.79
NECAP1-227ENST00000640648 ERCC4Q92889 916 aaPredicted RBP10.1□□□□□ -0.79
NECAP1-227ENST00000640648 CCDC7Q96M83 1385 aa10.1□□□□□ -0.79
NECAP1-227ENST00000640648 ARAP1Q96P48 1450 aa10.09□□□□□ -0.79
NECAP1-227ENST00000640648 FBXO3Q9UK99 471 aa10.09□□□□□ -0.79
NECAP1-227ENST00000640648 CCP110O43303 1012 aa10.09□□□□□ -0.79
NECAP1-227ENST00000640648 FEZ1Q99689 392 aa10.09□□□□□ -0.79
NECAP1-227ENST00000640648 KANK1Q14678 1352 aa10.09□□□□□ -0.79
NECAP1-227ENST00000640648 FOXD4L1Q9NU39 408 aa10.09□□□□□ -0.79
NECAP1-227ENST00000640648 SMC4Q9NTJ3 1288 aa10.08□□□□□ -0.8
NECAP1-227ENST00000640648 CGNQ9P2M7 1197 aaKnown RBP10.08□□□□□ -0.8
NECAP1-227ENST00000640648 TAOK2Q9UL54 1235 aa10.08□□□□□ -0.8
NECAP1-227ENST00000640648 ZNF644Q9H582 1327 aaPredicted RBP10.08□□□□□ -0.8
NECAP1-227ENST00000640648 TPM1P09493 284 aa10.08□□□□□ -0.8
NECAP1-227ENST00000640648 FGD6Q6ZV73 1430 aa10.08□□□□□ -0.8
NECAP1-227ENST00000640648 CGNL1Q0VF96 1302 aa10.08□□□□□ -0.8
NECAP1-227ENST00000640648 FAM184AQ8NB25 1140 aa10.08□□□□□ -0.8
NECAP1-227ENST00000640648 NINLQ9Y2I6 1382 aa10.08□□□□□ -0.8
NECAP1-227ENST00000640648 KIF2AO00139 706 aaPredicted RBP10.07□□□□□ -0.8
NECAP1-227ENST00000640648 A0A0G2JS52 829 aa10.06□□□□□ -0.8
NECAP1-227ENST00000640648 BCL11BQ9C0K0 894 aaPredicted RBP10.06□□□□□ -0.8
NECAP1-227ENST00000640648 LRRC9Q6ZRR7 1453 aa10.06□□□□□ -0.8
NECAP1-227ENST00000640648 IPO8O15397 1037 aaKnown RBP10.06□□□□□ -0.8
NECAP1-227ENST00000640648 CCDC184Q52MB2 194 aa10.06□□□□□ -0.8
NECAP1-227ENST00000640648 COG6Q9Y2V7 657 aa10.06□□□□□ -0.8
NECAP1-227ENST00000640648 SMG6Q86US8 1419 aaKnown RBP10.06□□□□□ -0.8
NECAP1-227ENST00000640648 CARMIL2Q6F5E8 1435 aa10.06□□□□□ -0.8
NECAP1-227ENST00000640648 UACAQ9BZF9 1416 aa10.06□□□□□ -0.8
NECAP1-227ENST00000640648 OS9Q13438 667 aaPredicted RBP10.06□□□□□ -0.8
NECAP1-227ENST00000640648 NUTM2DQ5VT03 806 aaPredicted RBP10.06□□□□□ -0.8
NECAP1-227ENST00000640648 APAF1O14727 1248 aa10.05□□□□□ -0.8
NECAP1-227ENST00000640648 GABPB1Q06547 395 aaPredicted RBP10.05□□□□□ -0.8
NECAP1-227ENST00000640648 CNTLNQ9NXG0 1405 aa10.05□□□□□ -0.8
NECAP1-227ENST00000640648 KIF3BO15066 747 aa10.05□□□□□ -0.8
NECAP1-227ENST00000640648 ST18O60284 1047 aa10.05□□□□□ -0.8
NECAP1-227ENST00000640648 NEFHP12036 1026 aa10.05□□□□□ -0.8
NECAP1-227ENST00000640648 KCNJ4P48050 445 aa10.05□□□□□ -0.8
NECAP1-227ENST00000640648 GTF2A1P52655 376 aaPredicted RBP10.05□□□□□ -0.8
NECAP1-227ENST00000640648 RRBP1Q9P2E9 1410 aaKnown RBP10.05□□□□□ -0.8
NECAP1-227ENST00000640648 RABEP1Q15276 862 aa10.04□□□□□ -0.8
NECAP1-227ENST00000640648 HSP90B2PQ58FF3 399 aa10.04□□□□□ -0.8
NECAP1-227ENST00000640648 OFD1O75665 1012 aa10.04□□□□□ -0.8
NECAP1-227ENST00000640648 PDS5BQ9NTI5 1447 aa10.04□□□□□ -0.8
NECAP1-227ENST00000640648 FRAT2O75474 233 aaPredicted RBP10.04□□□□□ -0.8
NECAP1-227ENST00000640648 HAP1P54257 671 aaPredicted RBP10.03□□□□□ -0.8
NECAP1-227ENST00000640648 EFCAB2Q5VUJ9 269 aa10.03□□□□□ -0.8
NECAP1-227ENST00000640648 MLECQ14165 292 aa10.03□□□□□ -0.8
NECAP1-227ENST00000640648 CCDC70Q6NSX1 233 aa10.03□□□□□ -0.8
NECAP1-227ENST00000640648 LMOD2Q6P5Q4 547 aa10.03□□□□□ -0.8
NECAP1-227ENST00000640648 GIMAP7Q8NHV1 300 aa10.03□□□□□ -0.8
NECAP1-227ENST00000640648 DDX11Q96FC9 970 aa10.03□□□□□ -0.8
NECAP1-227ENST00000640648 CCDC144AA2RUR9 1427 aa10.03□□□□□ -0.8
NECAP1-227ENST00000640648 CCDC91Q7Z6B0 441 aa10.03□□□□□ -0.8
NECAP1-227ENST00000640648 TXLNBQ8N3L3 684 aa10.03□□□□□ -0.8
NECAP1-227ENST00000640648 TRAK1Q9UPV9 953 aa10.03□□□□□ -0.8
NECAP1-227ENST00000640648 CLSTN1O94985 981 aa10.03□□□□□ -0.8
NECAP1-227ENST00000640648 LMOD3Q0VAK6 560 aa10.03□□□□□ -0.8
NECAP1-227ENST00000640648 CDCA7LQ96GN5 454 aa10.03□□□□□ -0.8
NECAP1-227ENST00000640648 RBM25P49756 843 aaKnown RBP10.03□□□□□ -0.8
NECAP1-227ENST00000640648 CHMP4CQ96CF2 233 aa10.03□□□□□ -0.8
NECAP1-227ENST00000640648 SYNJ1O43426 1573 aa10.02□□□□□ -0.8
NECAP1-227ENST00000640648 PPP4R3BQ5MIZ7 849 aa10.02□□□□□ -0.8
NECAP1-227ENST00000640648 MCM4P33991 863 aa10.02□□□□□ -0.81
NECAP1-227ENST00000640648 PLCD4Q9BRC7 762 aa10.02□□□□□ -0.81
NECAP1-227ENST00000640648 MYOM3Q5VTT5 1437 aa10.02□□□□□ -0.81
NECAP1-227ENST00000640648 FGD5Q6ZNL6 1462 aa10.02□□□□□ -0.81
NECAP1-227ENST00000640648 SETSIPP0DME0 302 aa10.02□□□□□ -0.81
NECAP1-227ENST00000640648 LIG1P18858 919 aa10.02□□□□□ -0.81
NECAP1-227ENST00000640648 VGFO15240 615 aaPredicted RBP10.01□□□□□ -0.81
NECAP1-227ENST00000640648 CDR1P51861 262 aa10.01□□□□□ -0.81
NECAP1-227ENST00000640648 JPH4Q96JJ6 628 aa10.01□□□□□ -0.81
NECAP1-227ENST00000640648 AKNAQ7Z591 1439 aa10.01□□□□□ -0.81
NECAP1-227ENST00000640648 RAD54L2Q9Y4B4 1467 aa10.01□□□□□ -0.81
NECAP1-227ENST00000640648 CC2D2AQ9P2K1 1620 aa10.01□□□□□ -0.81
NECAP1-227ENST00000640648 EIF3JO75822 258 aaKnown RBP10.01□□□□□ -0.81
NECAP1-227ENST00000640648 HDGFL2Q7Z4V5 671 aaPredicted RBP10.01□□□□□ -0.81
NECAP1-227ENST00000640648 ELL2O00472 640 aaPredicted RBP10□□□□□ -0.81
NECAP1-227ENST00000640648 FANCD2Q9BXW9 1451 aa10□□□□□ -0.81
NECAP1-227ENST00000640648 WDR97A6NE52 1622 aa10□□□□□ -0.81
NECAP1-227ENST00000640648 NOL8Q76FK4 1167 aaKnown RBP10□□□□□ -0.81
NECAP1-227ENST00000640648 CCDC191Q8NCU4 936 aa10□□□□□ -0.81
NECAP1-227ENST00000640648 IVLP07476 585 aa10□□□□□ -0.81
NECAP1-227ENST00000640648 NBPF8Q3BBV2 869 aa10□□□□□ -0.81
NECAP1-227ENST00000640648 DCTN1Q14203 1278 aa9.99□□□□□ -0.81
NECAP1-227ENST00000640648 SLC26A8Q96RN1 970 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms