RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 STAC3Q96MF2 364 aa12.51□□□□□ -0.41
HLA-B-258ENST00000640615 NLRP1Q9C000 1473 aa12.51□□□□□ -0.41
HLA-B-258ENST00000640615 NEURL4Q96JN8 1562 aa12.51□□□□□ -0.41
HLA-B-258ENST00000640615 CEP170BQ9Y4F5 1589 aaPredicted RBP12.51□□□□□ -0.41
HLA-B-258ENST00000640615 KIF1BO60333 1816 aa12.51□□□□□ -0.41
HLA-B-258ENST00000640615 NUTM2DQ5VT03 806 aaPredicted RBP12.5□□□□□ -0.41
HLA-B-258ENST00000640615 A2ML1A8K2U0 1454 aa12.49□□□□□ -0.41
HLA-B-258ENST00000640615 TMEM131LA2VDJ0 1609 aa12.48□□□□□ -0.41
HLA-B-258ENST00000640615 VGFO15240 615 aaPredicted RBP12.48□□□□□ -0.41
HLA-B-258ENST00000640615 ADGRF5Q8IZF2 1346 aa12.47□□□□□ -0.41
HLA-B-258ENST00000640615 HDGFP51858 240 aaKnown RBP12.47□□□□□ -0.41
HLA-B-258ENST00000640615 THEMISQ8N1K5 641 aaPredicted RBP12.47□□□□□ -0.41
HLA-B-258ENST00000640615 PRAG1Q86YV5 1406 aa12.46□□□□□ -0.41
HLA-B-258ENST00000640615 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.46□□□□□ -0.41
HLA-B-258ENST00000640615 RIMS2Q9UQ26 1411 aa12.45□□□□□ -0.42
HLA-B-258ENST00000640615 SENP3Q9H4L4 574 aaPredicted RBP12.45□□□□□ -0.42
HLA-B-258ENST00000640615 MYOM2P54296 1465 aa12.45□□□□□ -0.42
HLA-B-258ENST00000640615 TMEM2Q9UHN6 1383 aa12.44□□□□□ -0.42
HLA-B-258ENST00000640615 NEXMIFQ5QGS0 1516 aa12.44□□□□□ -0.42
HLA-B-258ENST00000640615 NCKAP5LQ9HCH0 1330 aa12.43□□□□□ -0.42
HLA-B-258ENST00000640615 TXNDC2Q86VQ3 553 aa12.43□□□□□ -0.42
HLA-B-258ENST00000640615 EID1Q9Y6B2 187 aa12.43□□□□□ -0.42
HLA-B-258ENST00000640615 NBPF1Q3BBV0 1214 aa12.42□□□□□ -0.42
HLA-B-258ENST00000640615 CFAP70Q5T0N1 1121 aa12.42□□□□□ -0.42
HLA-B-258ENST00000640615 ILDR2Q71H61 639 aa12.42□□□□□ -0.42
HLA-B-258ENST00000640615 BCANQ96GW7 911 aa12.42□□□□□ -0.42
HLA-B-258ENST00000640615 ZFYVE9O95405 1425 aa12.42□□□□□ -0.42
HLA-B-258ENST00000640615 UBR1Q8IWV7 1749 aa12.42□□□□□ -0.42
HLA-B-258ENST00000640615 ROCK2O75116 1388 aaKnown RBP12.42□□□□□ -0.42
HLA-B-258ENST00000640615 ZNF335Q9H4Z2 1342 aaPredicted RBP12.41□□□□□ -0.42
HLA-B-258ENST00000640615 POLR1AO95602 1720 aaPredicted RBP12.41□□□□□ -0.42
HLA-B-258ENST00000640615 LTKP29376 864 aa12.41□□□□□ -0.42
HLA-B-258ENST00000640615 CARD11Q9BXL7 1154 aa12.41□□□□□ -0.42
HLA-B-258ENST00000640615 MYO5BQ9ULV0 1848 aa12.41□□□□□ -0.42
HLA-B-258ENST00000640615 KDM5AP29375 1690 aaKnown RBP12.41□□□□□ -0.42
HLA-B-258ENST00000640615 DISP3Q9P2K9 1392 aa12.41□□□□□ -0.42
HLA-B-258ENST00000640615 RALGAPBQ86X10 1494 aa12.4□□□□□ -0.42
HLA-B-258ENST00000640615 NRXN1Q9ULB1 1477 aa12.4□□□□□ -0.42
HLA-B-258ENST00000640615 IFT172Q9UG01 1749 aa12.4□□□□□ -0.42
HLA-B-258ENST00000640615 PIK3C2GO75747 1445 aa12.4□□□□□ -0.42
HLA-B-258ENST00000640615 C14orf93Q9H972 538 aaKnown RBP12.4□□□□□ -0.42
HLA-B-258ENST00000640615 PPLO60437 1756 aa12.4□□□□□ -0.42
HLA-B-258ENST00000640615 SOCS7O14512 581 aa12.39□□□□□ -0.43
HLA-B-258ENST00000640615 ANKLE2Q86XL3 938 aa12.39□□□□□ -0.43
HLA-B-258ENST00000640615 SLIT1O75093 1534 aa12.38□□□□□ -0.43
HLA-B-258ENST00000640615 EIF4G2P78344 907 aaKnown RBP eCLIP12.38□□□□□ -0.43
HLA-B-258ENST00000640615 MED14O60244 1454 aa12.38□□□□□ -0.43
HLA-B-258ENST00000640615 ARHGAP23Q9P227 1491 aa12.38□□□□□ -0.43
HLA-B-258ENST00000640615 HIRIP3Q9BW71 556 aaPredicted RBP12.37□□□□□ -0.43
HLA-B-258ENST00000640615 TRPM1Q7Z4N2 1603 aa12.37□□□□□ -0.43
HLA-B-258ENST00000640615 CPS1P31327 1500 aa12.37□□□□□ -0.43
HLA-B-258ENST00000640615 GPRASP1Q5JY77 1395 aa12.36□□□□□ -0.43
HLA-B-258ENST00000640615 HSPA5P11021 654 aaKnown RBP12.36□□□□□ -0.43
HLA-B-258ENST00000640615 TMEM132EQ6IEE7 984 aa12.36□□□□□ -0.43
HLA-B-258ENST00000640615 SCAF11Q99590 1463 aaKnown RBP12.35□□□□□ -0.43
HLA-B-258ENST00000640615 PLEKHG1Q9ULL1 1385 aa12.35□□□□□ -0.43
HLA-B-258ENST00000640615 ZNF316A6NFI3 1004 aaPredicted RBP12.35□□□□□ -0.43
HLA-B-258ENST00000640615 USP47Q96K76 1375 aa12.34□□□□□ -0.43
HLA-B-258ENST00000640615 UBAP1LF5GYI3 381 aa12.33□□□□□ -0.44
HLA-B-258ENST00000640615 SLC26A8Q96RN1 970 aa12.33□□□□□ -0.44
HLA-B-258ENST00000640615 STK26Q9P289 416 aa12.33□□□□□ -0.44
HLA-B-258ENST00000640615 KIAA1210Q9ULL0 1709 aa12.32□□□□□ -0.44
HLA-B-258ENST00000640615 TRAK1Q9UPV9 953 aa12.32□□□□□ -0.44
HLA-B-258ENST00000640615 ALKQ9UM73 1620 aa12.32□□□□□ -0.44
HLA-B-258ENST00000640615 ST20-MTHFSA0A0A6YYL1 179 aa12.31□□□□□ -0.44
HLA-B-258ENST00000640615 TBX22Q9Y458 520 aa12.31□□□□□ -0.44
HLA-B-258ENST00000640615 SETBP1Q9Y6X0 1596 aa12.3□□□□□ -0.44
HLA-B-258ENST00000640615 ADAMTS13Q76LX8 1427 aa12.3□□□□□ -0.44
HLA-B-258ENST00000640615 ADGRB1O14514 1584 aa12.3□□□□□ -0.44
HLA-B-258ENST00000640615 METP08581 1390 aa12.3□□□□□ -0.44
HLA-B-258ENST00000640615 LAMC1P11047 1609 aa12.29□□□□□ -0.44
HLA-B-258ENST00000640615 NPHP4O75161 1426 aaPredicted RBP12.29□□□□□ -0.44
HLA-B-258ENST00000640615 IQGAP1P46940 1657 aa12.29□□□□□ -0.44
HLA-B-258ENST00000640615 EIF3AQ14152 1382 aaKnown RBP12.29□□□□□ -0.44
HLA-B-258ENST00000640615 YTHDC2Q9H6S0 1430 aaKnown RBP12.28□□□□□ -0.44
HLA-B-258ENST00000640615 STRCP1A6NGW2 1772 aa12.28□□□□□ -0.44
HLA-B-258ENST00000640615 NRXN3Q9Y4C0 1643 aa12.28□□□□□ -0.44
HLA-B-258ENST00000640615 LRPPRCP42704 1394 aaKnown RBP12.28□□□□□ -0.44
HLA-B-258ENST00000640615 ASXL1Q8IXJ9 1541 aa12.27□□□□□ -0.45
HLA-B-258ENST00000640615 POGKQ9P215 609 aa12.26□□□□□ -0.45
HLA-B-258ENST00000640615 CENPJQ9HC77 1338 aaPredicted RBP12.26□□□□□ -0.45
HLA-B-258ENST00000640615 TOM1O60784 492 aa12.25□□□□□ -0.45
HLA-B-258ENST00000640615 PRAM1Q96QH2 718 aa12.25□□□□□ -0.45
HLA-B-258ENST00000640615 AMOTL2Q9Y2J4 779 aa12.25□□□□□ -0.45
HLA-B-258ENST00000640615 SAFB2Q14151 953 aaKnown RBP eCLIP12.24□□□□□ -0.45
HLA-B-258ENST00000640615 DIP2AQ14689 1571 aa12.24□□□□□ -0.45
HLA-B-258ENST00000640615 MED1Q15648 1581 aaPredicted RBP12.24□□□□□ -0.45
HLA-B-258ENST00000640615 ABCC11Q96J66 1382 aa12.24□□□□□ -0.45
HLA-B-258ENST00000640615 LRRC7Q96NW7 1537 aa12.24□□□□□ -0.45
HLA-B-258ENST00000640615 C11orf95C9JLR9 678 aaPredicted RBP12.23□□□□□ -0.45
HLA-B-258ENST00000640615 HSPA1LP34931 641 aa12.23□□□□□ -0.45
HLA-B-258ENST00000640615 TMF1P82094 1093 aa12.23□□□□□ -0.45
HLA-B-258ENST00000640615 WAPLQ7Z5K2 1190 aa12.23□□□□□ -0.45
HLA-B-258ENST00000640615 SIRT1Q96EB6 747 aa12.23□□□□□ -0.45
HLA-B-258ENST00000640615 TESK2Q96S53 571 aa12.23□□□□□ -0.45
HLA-B-258ENST00000640615 POLR3GLQ9BT43 218 aa12.23□□□□□ -0.45
HLA-B-258ENST00000640615 SETD1AO15047 1707 aaKnown RBP12.23□□□□□ -0.45
HLA-B-258ENST00000640615 PTPRUQ92729 1446 aa12.22□□□□□ -0.45
HLA-B-258ENST00000640615 PIK3R4Q99570 1358 aa12.22□□□□□ -0.45
HLA-B-258ENST00000640615 SLC24A1O60721 1099 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms