RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 CROCC2H7BZ55 1655 aa27.92■■■□□ 2.06
VPS72-207ENST00000640458 NWD1Q149M9 1564 aa27.92■■■□□ 2.06
VPS72-207ENST00000640458 MEX3CQ5U5Q3 659 aaKnown RBP27.9■■■□□ 2.06
VPS72-207ENST00000640458 ADGRB3O60242 1522 aa27.88■■■□□ 2.05
VPS72-207ENST00000640458 UPF1Q92900 1129 aaKnown RBP eCLIP27.88■■■□□ 2.05
VPS72-207ENST00000640458 TRIM52Q96A61 297 aa27.88■■■□□ 2.05
VPS72-207ENST00000640458 CHIC2Q9UKJ5 165 aa27.88■■■□□ 2.05
VPS72-207ENST00000640458 LMTK2Q8IWU2 1503 aa27.87■■■□□ 2.05
VPS72-207ENST00000640458 ANKRD30AQ9BXX3 1397 aa27.86■■■□□ 2.05
VPS72-207ENST00000640458 NOS1P29475 1434 aa27.86■■■□□ 2.05
VPS72-207ENST00000640458 SLC52A1Q9NWF4 448 aa27.86■■■□□ 2.05
VPS72-207ENST00000640458 ZNF772Q68DY9 489 aaPredicted RBP27.85■■■□□ 2.05
VPS72-207ENST00000640458 PPP1R15AO75807 674 aaPredicted RBP27.84■■■□□ 2.05
VPS72-207ENST00000640458 C14orf37Q86TY3 774 aa27.84■■■□□ 2.05
VPS72-207ENST00000640458 LRP6O75581 1613 aa27.83■■■□□ 2.05
VPS72-207ENST00000640458 COL16A1Q07092 1604 aaPredicted RBP27.83■■■□□ 2.05
VPS72-207ENST00000640458 SPATA31A6Q5VVP1 1343 aa27.83■■■□□ 2.05
VPS72-207ENST00000640458 ADGRL2O95490 1459 aa27.82■■■□□ 2.04
VPS72-207ENST00000640458 PLEKHG1Q9ULL1 1385 aa27.8■■■□□ 2.04
VPS72-207ENST00000640458 CHD2O14647 1828 aaKnown RBP27.79■■■□□ 2.04
VPS72-207ENST00000640458 HDGFP51858 240 aaKnown RBP27.78■■■□□ 2.04
VPS72-207ENST00000640458 ZFYVE9O95405 1425 aa27.76■■■□□ 2.04
VPS72-207ENST00000640458 RIMS2Q9UQ26 1411 aa27.76■■■□□ 2.04
VPS72-207ENST00000640458 RXRBP28702 533 aa27.75■■■□□ 2.03
VPS72-207ENST00000640458 TBX22Q9Y458 520 aa27.75■■■□□ 2.03
VPS72-207ENST00000640458 ATF3P18847 181 aa27.73■■■□□ 2.03
VPS72-207ENST00000640458 CADPS2Q86UW7 1296 aa27.73■■■□□ 2.03
VPS72-207ENST00000640458 RRBP1Q9P2E9 1410 aaKnown RBP27.73■■■□□ 2.03
VPS72-207ENST00000640458 NCOA3Q9Y6Q9 1424 aa27.73■■■□□ 2.03
VPS72-207ENST00000640458 MYO5BQ9ULV0 1848 aa27.72■■■□□ 2.03
VPS72-207ENST00000640458 NUTM2BA6NNL0 878 aaPredicted RBP27.72■■■□□ 2.03
VPS72-207ENST00000640458 NUTM2EB1AL46 878 aaPredicted RBP27.72■■■□□ 2.03
VPS72-207ENST00000640458 NUTM2AQ8IVF1 878 aaPredicted RBP27.72■■■□□ 2.03
VPS72-207ENST00000640458 CHGAP10645 457 aaKnown RBP27.71■■■□□ 2.03
VPS72-207ENST00000640458 C19orf44Q9H6X5 657 aa27.71■■■□□ 2.03
VPS72-207ENST00000640458 NUTM2DQ5VT03 806 aaPredicted RBP27.7■■■□□ 2.02
VPS72-207ENST00000640458 ROCK1Q13464 1354 aa27.7■■■□□ 2.02
VPS72-207ENST00000640458 AHDC1Q5TGY3 1603 aaPredicted RBP27.69■■■□□ 2.02
VPS72-207ENST00000640458 RPRD2Q5VT52 1461 aaKnown RBP27.68■■■□□ 2.02
VPS72-207ENST00000640458 SHPRHQ149N8 1683 aa27.68■■■□□ 2.02
VPS72-207ENST00000640458 GCC2Q8IWJ2 1684 aa27.68■■■□□ 2.02
VPS72-207ENST00000640458 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.67■■■□□ 2.02
VPS72-207ENST00000640458 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.67■■■□□ 2.02
VPS72-207ENST00000640458 ANKRD50Q9ULJ7 1429 aa27.67■■■□□ 2.02
VPS72-207ENST00000640458 ITGAEP38570 1179 aa27.66■■■□□ 2.02
VPS72-207ENST00000640458 TMEM131LA2VDJ0 1609 aa27.65■■■□□ 2.02
VPS72-207ENST00000640458 BRINP3Q76B58 766 aa27.64■■■□□ 2.02
VPS72-207ENST00000640458 ADAMTS13Q76LX8 1427 aa27.63■■■□□ 2.01
VPS72-207ENST00000640458 AFF2P51816 1311 aa27.62■■■□□ 2.01
VPS72-207ENST00000640458 CDK12Q9NYV4 1490 aaPredicted RBP27.6■■■□□ 2.01
VPS72-207ENST00000640458 AMOTL2Q9Y2J4 779 aa27.59■■■□□ 2.01
VPS72-207ENST00000640458 PIK3R4Q99570 1358 aa27.59■■■□□ 2.01
VPS72-207ENST00000640458 DIP2AQ14689 1571 aa27.57■■■□□ 2
VPS72-207ENST00000640458 PTPRUQ92729 1446 aa27.52■■■□□ 2
VPS72-207ENST00000640458 C8orf37Q96NL8 207 aa27.52■■■□□ 2
VPS72-207ENST00000640458 QTRT2Q9H974 415 aaKnown RBP27.52■■■□□ 2
VPS72-207ENST00000640458 TRPM2O94759 1503 aa27.51■■■□□ 2
VPS72-207ENST00000640458 LRRC59Q96AG4 307 aaKnown RBP27.5■■□□□ 1.99
VPS72-207ENST00000640458 ASXL1Q8IXJ9 1541 aa27.5■■□□□ 1.99
VPS72-207ENST00000640458 SETD5Q9C0A6 1442 aa27.5■■□□□ 1.99
VPS72-207ENST00000640458 RBM6P78332 1123 aaKnown RBP27.49■■□□□ 1.99
VPS72-207ENST00000640458 RGS12O14924 1447 aa27.49■■□□□ 1.99
VPS72-207ENST00000640458 DCCP43146 1447 aa27.48■■□□□ 1.99
VPS72-207ENST00000640458 DDX17Q92841 729 aaKnown RBP27.46■■□□□ 1.99
VPS72-207ENST00000640458 UNC13BO14795 1591 aa27.45■■□□□ 1.99
VPS72-207ENST00000640458 MST1RQ04912 1400 aa27.45■■□□□ 1.98
VPS72-207ENST00000640458 E9PCH4 1651 aa27.44■■□□□ 1.98
VPS72-207ENST00000640458 NHSL1Q5SYE7 1610 aa27.41■■□□□ 1.98
VPS72-207ENST00000640458 PNPLA6Q8IY17 1366 aa27.41■■□□□ 1.98
VPS72-207ENST00000640458 NGLY1Q96IV0 654 aa27.41■■□□□ 1.98
VPS72-207ENST00000640458 NAIPQ13075 1403 aa27.41■■□□□ 1.98
VPS72-207ENST00000640458 ADAMTS2O95450 1211 aa27.4■■□□□ 1.98
VPS72-207ENST00000640458 NUP155O75694 1391 aa27.39■■□□□ 1.98
VPS72-207ENST00000640458 XRN1Q8IZH2 1706 aaKnown RBP27.37■■□□□ 1.97
VPS72-207ENST00000640458 HFM1A2PYH4 1435 aa27.36■■□□□ 1.97
VPS72-207ENST00000640458 METP08581 1390 aa27.35■■□□□ 1.97
VPS72-207ENST00000640458 ZNF326Q5BKZ1 582 aaKnown RBP27.34■■□□□ 1.97
VPS72-207ENST00000640458 ATAD2Q6PL18 1390 aa27.34■■□□□ 1.97
VPS72-207ENST00000640458 IQGAP3Q86VI3 1631 aa27.34■■□□□ 1.97
VPS72-207ENST00000640458 NRXN3Q9Y4C0 1643 aa27.34■■□□□ 1.97
VPS72-207ENST00000640458 SRCAPQ6ZRS2 3230 aa27.32■■□□□ 1.96
VPS72-207ENST00000640458 ADGRL3Q9HAR2 1447 aa27.32■■□□□ 1.96
VPS72-207ENST00000640458 SETBP1Q9Y6X0 1596 aa27.31■■□□□ 1.96
VPS72-207ENST00000640458 USP21Q9UK80 565 aa27.3■■□□□ 1.96
VPS72-207ENST00000640458 ZRANB1Q9UGI0 708 aa27.29■■□□□ 1.96
VPS72-207ENST00000640458 FOXD1Q16676 465 aa27.27■■□□□ 1.96
VPS72-207ENST00000640458 TRPC5Q9UL62 973 aaPredicted RBP27.27■■□□□ 1.96
VPS72-207ENST00000640458 C1orf167Q5SNV9 1468 aa27.25■■□□□ 1.95
VPS72-207ENST00000640458 NALCNQ8IZF0 1738 aa27.24■■□□□ 1.95
VPS72-207ENST00000640458 ORAI2Q96SN7 254 aa27.22■■□□□ 1.95
VPS72-207ENST00000640458 SOS2Q07890 1332 aaPredicted RBP27.2■■□□□ 1.95
VPS72-207ENST00000640458 FNBP4Q8N3X1 1017 aaPredicted RBP27.2■■□□□ 1.94
VPS72-207ENST00000640458 PTCH1Q13635 1447 aa27.17■■□□□ 1.94
VPS72-207ENST00000640458 ATRNO75882 1429 aa27.16■■□□□ 1.94
VPS72-207ENST00000640458 SPHKAPQ2M3C7 1700 aa27.16■■□□□ 1.94
VPS72-207ENST00000640458 LAMC1P11047 1609 aa27.15■■□□□ 1.94
VPS72-207ENST00000640458 CCDC125Q86Z20 511 aa27.13■■□□□ 1.93
VPS72-207ENST00000640458 NEXMIFQ5QGS0 1516 aa27.11■■□□□ 1.93
VPS72-207ENST00000640458 ROBO2Q9HCK4 1378 aa27.11■■□□□ 1.93
VPS72-207ENST00000640458 SLC4A1APQ9BWU0 796 aaKnown RBP27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms