RNA–Protein interactions for RNA: ENST00000640251.1

PAX6-267, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-267	ENST00000640251	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	12.7	□□□□□ -0.38
PAX6-267	ENST00000640251	RCCD1	A6NED2	376 aa		12.69	□□□□□ -0.38
PAX6-267	ENST00000640251	SOWAHB	A6NEL2	793 aa		12.69	□□□□□ -0.38
PAX6-267	ENST00000640251	ZMYND10	O75800	440 aa		12.69	□□□□□ -0.38
PAX6-267	ENST00000640251	METTL3	Q86U44	580 aa	Known RBP	12.69	□□□□□ -0.38
PAX6-267	ENST00000640251	PXYLP1	Q8TE99	480 aa		12.69	□□□□□ -0.38
PAX6-267	ENST00000640251	SMARCA4	P51532	1647 aa		12.69	□□□□□ -0.38
PAX6-267	ENST00000640251	ATAD2B	Q9ULI0	1458 aa		12.68	□□□□□ -0.38
PAX6-267	ENST00000640251	SWT1	Q5T5J6	900 aa	Known RBP	12.68	□□□□□ -0.38
PAX6-267	ENST00000640251	IRF6	O14896	467 aa		12.67	□□□□□ -0.38
PAX6-267	ENST00000640251	RNF40	O75150	1001 aa		12.67	□□□□□ -0.38
PAX6-267	ENST00000640251	DNAJB2	P25686	324 aa		12.67	□□□□□ -0.38
PAX6-267	ENST00000640251	BARGIN	Q6ZT62	677 aa		12.67	□□□□□ -0.38
PAX6-267	ENST00000640251	MINK1	Q8N4C8	1332 aa	Predicted RBP	12.66	□□□□□ -0.38
PAX6-267	ENST00000640251	NLRP7	Q8WX94	980 aa		12.66	□□□□□ -0.38
PAX6-267	ENST00000640251	HCST	Q9UBK5	93 aa		12.66	□□□□□ -0.38
PAX6-267	ENST00000640251	HPS5	Q9UPZ3	1129 aa		12.65	□□□□□ -0.38
PAX6-267	ENST00000640251	NCAPD3	P42695	1498 aa		12.65	□□□□□ -0.38
PAX6-267	ENST00000640251	CCDC102A	Q96A19	550 aa		12.64	□□□□□ -0.39
PAX6-267	ENST00000640251	PHOX2B	Q99453	314 aa		12.64	□□□□□ -0.39
PAX6-267	ENST00000640251	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	12.63	□□□□□ -0.39
PAX6-267	ENST00000640251	NES	P48681	1621 aa		12.62	□□□□□ -0.39
PAX6-267	ENST00000640251	TMEM134	Q9H6X4	195 aa		12.62	□□□□□ -0.39
PAX6-267	ENST00000640251	WBP1L	Q9NX94	342 aa		12.62	□□□□□ -0.39
PAX6-267	ENST00000640251	MROH2B	Q7Z745	1585 aa		12.61	□□□□□ -0.39
PAX6-267	ENST00000640251	PPP4C	P60510	307 aa		12.61	□□□□□ -0.39
PAX6-267	ENST00000640251	TSR3	Q9UJK0	312 aa	Known RBP	12.61	□□□□□ -0.39
PAX6-267	ENST00000640251	SLF2	Q8IX21	1173 aa		12.59	□□□□□ -0.39
PAX6-267	ENST00000640251	SLC4A3	P48751	1232 aa		12.58	□□□□□ -0.4
PAX6-267	ENST00000640251	SMARCA2	P51531	1590 aa		12.56	□□□□□ -0.4
PAX6-267	ENST00000640251	SLC24A3	Q9HC58	644 aa		12.56	□□□□□ -0.4
PAX6-267	ENST00000640251	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	12.56	□□□□□ -0.4
PAX6-267	ENST00000640251	BAZ1B	Q9UIG0	1483 aa	Known RBP	12.54	□□□□□ -0.4
PAX6-267	ENST00000640251	HMGXB3	Q12766	1538 aa		12.54	□□□□□ -0.4
PAX6-267	ENST00000640251	MDM2	Q00987	491 aa	Predicted RBP	12.54	□□□□□ -0.4
PAX6-267	ENST00000640251	DAXX	Q9UER7	740 aa	Predicted RBP	12.54	□□□□□ -0.4
PAX6-267	ENST00000640251	ERCC6	Q03468	1493 aa		12.53	□□□□□ -0.4
PAX6-267	ENST00000640251	DDX11L8	A8MPP1	907 aa		12.51	□□□□□ -0.41
PAX6-267	ENST00000640251	AK7	Q96M32	723 aa		12.51	□□□□□ -0.41
PAX6-267	ENST00000640251	WIZ	O95785	1651 aa		12.49	□□□□□ -0.41
PAX6-267	ENST00000640251	SLC10A3	P09131	477 aa		12.49	□□□□□ -0.41
PAX6-267	ENST00000640251	NYAP1	Q6ZVC0	841 aa		12.49	□□□□□ -0.41
PAX6-267	ENST00000640251	RDH13	Q8NBN7	331 aa		12.49	□□□□□ -0.41
PAX6-267	ENST00000640251	TRIM66	O15016	1216 aa		12.48	□□□□□ -0.41
PAX6-267	ENST00000640251	APLP1	P51693	650 aa		12.48	□□□□□ -0.41
PAX6-267	ENST00000640251	TPRN	Q4KMQ1	711 aa		12.48	□□□□□ -0.41
PAX6-267	ENST00000640251	NECTIN2	Q92692	538 aa		12.48	□□□□□ -0.41
PAX6-267	ENST00000640251	PEG3	Q9GZU2	1588 aa		12.47	□□□□□ -0.41
PAX6-267	ENST00000640251	CFH	P08603	1231 aa		12.46	□□□□□ -0.41
PAX6-267	ENST00000640251	TTLL12	Q14166	644 aa	Predicted RBP	12.46	□□□□□ -0.41
PAX6-267	ENST00000640251	RSPH4A	Q5TD94	716 aa		12.46	□□□□□ -0.41
PAX6-267	ENST00000640251	CLCN1	P35523	988 aa		12.45	□□□□□ -0.42
PAX6-267	ENST00000640251	GPCPD1	Q9NPB8	672 aa		12.45	□□□□□ -0.42
PAX6-267	ENST00000640251	SULF1	Q8IWU6	871 aa		12.44	□□□□□ -0.42
PAX6-267	ENST00000640251	REPIN1	Q9BWE0	567 aa	Known RBP	12.44	□□□□□ -0.42
PAX6-267	ENST00000640251	KIF21A	Q7Z4S6	1674 aa		12.42	□□□□□ -0.42
PAX6-267	ENST00000640251	AMHR2	Q16671	573 aa		12.42	□□□□□ -0.42
PAX6-267	ENST00000640251	KMT5B	Q4FZB7	885 aa		12.42	□□□□□ -0.42
PAX6-267	ENST00000640251	PLA2G2E	Q9NZK7	142 aa		12.42	□□□□□ -0.42
PAX6-267	ENST00000640251	CUX2	O14529	1486 aa		12.41	□□□□□ -0.42
PAX6-267	ENST00000640251	TMUB1	Q9BVT8	246 aa		12.4	□□□□□ -0.42
PAX6-267	ENST00000640251	PRR14	Q9BWN1	585 aa		12.4	□□□□□ -0.42
PAX6-267	ENST00000640251	THOC2	Q8NI27	1593 aa	Known RBP	12.39	□□□□□ -0.43
PAX6-267	ENST00000640251	PDE4D	Q08499	809 aa		12.39	□□□□□ -0.43
PAX6-267	ENST00000640251	FAM217B	Q9NTX9	383 aa	Predicted RBP	12.39	□□□□□ -0.43
PAX6-267	ENST00000640251	ACTN4	O43707	911 aa	Known RBP	12.38	□□□□□ -0.43
PAX6-267	ENST00000640251	COPS2	P61201	443 aa		12.38	□□□□□ -0.43
PAX6-267	ENST00000640251	MTR	Q99707	1265 aa		12.38	□□□□□ -0.43
PAX6-267	ENST00000640251	PCDHB3	Q9Y5E6	796 aa		12.38	□□□□□ -0.43
PAX6-267	ENST00000640251	CD46	P15529	392 aa		12.37	□□□□□ -0.43
PAX6-267	ENST00000640251	SSTR3	P32745	418 aa	Predicted RBP	12.37	□□□□□ -0.43
PAX6-267	ENST00000640251	GCGR	P47871	477 aa		12.37	□□□□□ -0.43
PAX6-267	ENST00000640251	GIGYF2	Q6Y7W6	1299 aa	Known RBP	12.37	□□□□□ -0.43
PAX6-267	ENST00000640251	PARP9	Q8IXQ6	854 aa		12.37	□□□□□ -0.43
PAX6-267	ENST00000640251	TJAP1	Q5JTD0	557 aa		12.35	□□□□□ -0.43
PAX6-267	ENST00000640251	LAMC3	Q9Y6N6	1575 aa		12.35	□□□□□ -0.43
PAX6-267	ENST00000640251	PRKCSH	P14314	528 aa	Predicted RBP	12.34	□□□□□ -0.43
PAX6-267	ENST00000640251	KCNC4	Q03721	635 aa		12.34	□□□□□ -0.43
PAX6-267	ENST00000640251	PUS10	Q3MIT2	529 aa	Known RBP	12.34	□□□□□ -0.43
PAX6-267	ENST00000640251	BLOC1S3	Q6QNY0	202 aa		12.34	□□□□□ -0.43
PAX6-267	ENST00000640251	ITGBL1	O95965	494 aa	Predicted RBP	12.33	□□□□□ -0.44
PAX6-267	ENST00000640251	ZNF516	Q92618	1163 aa		12.33	□□□□□ -0.44
PAX6-267	ENST00000640251	IL21	Q9HBE4	155 aa		12.33	□□□□□ -0.44
PAX6-267	ENST00000640251	RSF1	Q96T23	1441 aa	Predicted RBP	12.32	□□□□□ -0.44
PAX6-267	ENST00000640251	FUT2	Q10981	343 aa		12.32	□□□□□ -0.44
PAX6-267	ENST00000640251	KDM4A	O75164	1064 aa		12.29	□□□□□ -0.44
PAX6-267	ENST00000640251	MS4A1	P11836	297 aa		12.29	□□□□□ -0.44
PAX6-267	ENST00000640251	CADPS	Q9ULU8	1353 aa		12.29	□□□□□ -0.44
PAX6-267	ENST00000640251	ATP6V1A	P38606	617 aa		12.28	□□□□□ -0.44
PAX6-267	ENST00000640251	BEGAIN	Q9BUH8	593 aa		12.28	□□□□□ -0.44
PAX6-267	ENST00000640251	NUTM1	Q86Y26	1132 aa		12.27	□□□□□ -0.45
PAX6-267	ENST00000640251	GPBP1L1	Q9HC44	474 aa	Predicted RBP	12.27	□□□□□ -0.45
PAX6-267	ENST00000640251	ZPR1	O75312	459 aa		12.26	□□□□□ -0.45
PAX6-267	ENST00000640251	NKX2-3	Q8TAU0	364 aa		12.26	□□□□□ -0.45
PAX6-267	ENST00000640251	PDS5B	Q9NTI5	1447 aa		12.26	□□□□□ -0.45
PAX6-267	ENST00000640251	NR1I2	O75469	434 aa		12.25	□□□□□ -0.45
PAX6-267	ENST00000640251	MORN1	Q5T089	497 aa		12.25	□□□□□ -0.45
PAX6-267	ENST00000640251	SCUBE3	Q8IX30	993 aa		12.25	□□□□□ -0.45
PAX6-267	ENST00000640251	GRIPAP1	Q4V328	841 aa		12.24	□□□□□ -0.45
PAX6-267	ENST00000640251	TLL1	O43897	1013 aa		12.23	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms