RNA–Protein interactions for RNA: ENST00000639594.1

CROCCP2-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best)

Gene CROCCP2, Length 2,175 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-206ENST00000639594 MLH3Q9UHC1 1453 aa25.49■■□□□ 1.67
CROCCP2-206ENST00000639594 B4GALNT3Q6L9W6 998 aa25.48■■□□□ 1.67
CROCCP2-206ENST00000639594 RNF123Q5XPI4 1314 aa25.47■■□□□ 1.67
CROCCP2-206ENST00000639594 WASHC2CQ9Y4E1 1318 aa25.47■■□□□ 1.67
CROCCP2-206ENST00000639594 ABCA6Q8N139 1617 aa25.47■■□□□ 1.67
CROCCP2-206ENST00000639594 CC2D1BQ5T0F9 858 aaKnown RBP25.47■■□□□ 1.67
CROCCP2-206ENST00000639594 FRMPD1Q5SYB0 1578 aa25.45■■□□□ 1.66
CROCCP2-206ENST00000639594 MYT1Q01538 1121 aa25.44■■□□□ 1.66
CROCCP2-206ENST00000639594 STAC3Q96MF2 364 aa25.44■■□□□ 1.66
CROCCP2-206ENST00000639594 KIF1BO60333 1816 aa25.43■■□□□ 1.66
CROCCP2-206ENST00000639594 KIAA1210Q9ULL0 1709 aa25.42■■□□□ 1.66
CROCCP2-206ENST00000639594 SCAF11Q99590 1463 aaKnown RBP25.41■■□□□ 1.66
CROCCP2-206ENST00000639594 UGGT1Q9NYU2 1555 aa25.41■■□□□ 1.66
CROCCP2-206ENST00000639594 NEURL4Q96JN8 1562 aa25.4■■□□□ 1.66
CROCCP2-206ENST00000639594 DIP2CQ9Y2E4 1556 aa25.38■■□□□ 1.65
CROCCP2-206ENST00000639594 EFCAB6Q5THR3 1501 aa25.38■■□□□ 1.65
CROCCP2-206ENST00000639594 IFT172Q9UG01 1749 aa25.36■■□□□ 1.65
CROCCP2-206ENST00000639594 YEATS2Q9ULM3 1422 aa25.36■■□□□ 1.65
CROCCP2-206ENST00000639594 MROH2AA6NES4 1674 aa25.35■■□□□ 1.65
CROCCP2-206ENST00000639594 SALL2Q9Y467 1007 aaPredicted RBP25.35■■□□□ 1.65
CROCCP2-206ENST00000639594 CFAP65Q6ZU64 1925 aaKnown RBP25.34■■□□□ 1.65
CROCCP2-206ENST00000639594 SYNMO15061 1565 aa25.34■■□□□ 1.65
CROCCP2-206ENST00000639594 MYOM1P52179 1685 aa25.34■■□□□ 1.65
CROCCP2-206ENST00000639594 MYOM2P54296 1465 aa25.31■■□□□ 1.64
CROCCP2-206ENST00000639594 ZMYM4Q5VZL5 1548 aa25.3■■□□□ 1.64
CROCCP2-206ENST00000639594 BLMP54132 1417 aaPredicted RBP25.3■■□□□ 1.64
CROCCP2-206ENST00000639594 LMTK2Q8IWU2 1503 aa25.3■■□□□ 1.64
CROCCP2-206ENST00000639594 CDCA8Q53HL2 280 aa25.29■■□□□ 1.64
CROCCP2-206ENST00000639594 KNSTRNQ9Y448 316 aa25.29■■□□□ 1.64
CROCCP2-206ENST00000639594 KDM5AP29375 1690 aaKnown RBP25.29■■□□□ 1.64
CROCCP2-206ENST00000639594 CFAP70Q5T0N1 1121 aa25.28■■□□□ 1.64
CROCCP2-206ENST00000639594 ADGRF5Q8IZF2 1346 aa25.28■■□□□ 1.64
CROCCP2-206ENST00000639594 INSRP06213 1382 aa25.28■■□□□ 1.64
CROCCP2-206ENST00000639594 EIF3AQ14152 1382 aaKnown RBP25.28■■□□□ 1.64
CROCCP2-206ENST00000639594 ANP32EQ9BTT0 268 aa25.28■■□□□ 1.64
CROCCP2-206ENST00000639594 PDE3BQ13370 1112 aa25.27■■□□□ 1.64
CROCCP2-206ENST00000639594 AMER1Q5JTC6 1135 aaPredicted RBP25.25■■□□□ 1.63
CROCCP2-206ENST00000639594 GGT6Q6P531 493 aa25.25■■□□□ 1.63
CROCCP2-206ENST00000639594 CCDC136Q96JN2 1154 aa25.24■■□□□ 1.63
CROCCP2-206ENST00000639594 ASXL1Q8IXJ9 1541 aa25.23■■□□□ 1.63
CROCCP2-206ENST00000639594 CDCA7LQ96GN5 454 aa25.23■■□□□ 1.63
CROCCP2-206ENST00000639594 RCAN3Q9UKA8 241 aa25.23■■□□□ 1.63
CROCCP2-206ENST00000639594 PPP2R1AP30153 589 aa25.22■■□□□ 1.63
CROCCP2-206ENST00000639594 RRP1P56182 461 aaKnown RBP25.22■■□□□ 1.63
CROCCP2-206ENST00000639594 FANCIQ9NVI1 1328 aa25.21■■□□□ 1.63
CROCCP2-206ENST00000639594 ADGRB3O60242 1522 aa25.21■■□□□ 1.63
CROCCP2-206ENST00000639594 NRXN1Q9ULB1 1477 aa25.2■■□□□ 1.63
CROCCP2-206ENST00000639594 ADAMTS8Q9UP79 889 aa25.19■■□□□ 1.62
CROCCP2-206ENST00000639594 ERVK-7P63135 1459 aa25.19■■□□□ 1.62
CROCCP2-206ENST00000639594 PPLO60437 1756 aa25.19■■□□□ 1.62
CROCCP2-206ENST00000639594 MSH5O43196 834 aa25.18■■□□□ 1.62
CROCCP2-206ENST00000639594 NPATQ14207 1427 aa25.18■■□□□ 1.62
CROCCP2-206ENST00000639594 MYO3AQ8NEV4 1616 aa25.17■■□□□ 1.62
CROCCP2-206ENST00000639594 NOS1P29475 1434 aa25.17■■□□□ 1.62
CROCCP2-206ENST00000639594 ABCC3O15438 1527 aa25.16■■□□□ 1.62
CROCCP2-206ENST00000639594 SIGLEC1Q9BZZ2 1709 aa25.16■■□□□ 1.62
CROCCP2-206ENST00000639594 CHGAP10645 457 aaKnown RBP25.15■■□□□ 1.62
CROCCP2-206ENST00000639594 NPC1L1Q9UHC9 1359 aa25.14■■□□□ 1.62
CROCCP2-206ENST00000639594 SETBP1Q9Y6X0 1596 aa25.13■■□□□ 1.61
CROCCP2-206ENST00000639594 EXOC6Q8TAG9 804 aa25.12■■□□□ 1.61
CROCCP2-206ENST00000639594 SLC24A1O60721 1099 aa25.12■■□□□ 1.61
CROCCP2-206ENST00000639594 CAMSAP1Q5T5Y3 1602 aa25.12■■□□□ 1.61
CROCCP2-206ENST00000639594 PIK3C2GO75747 1445 aa25.11■■□□□ 1.61
CROCCP2-206ENST00000639594 WDR43Q15061 677 aaKnown RBP eCLIP25.11■■□□□ 1.614e-8■■■■□ 21.4
CROCCP2-206ENST00000639594 ZC3H13Q5T200 1668 aaKnown RBP25.09■■□□□ 1.61
CROCCP2-206ENST00000639594 REREQ9P2R6 1566 aa25.08■■□□□ 1.61
CROCCP2-206ENST00000639594 DNAJC5Q9H3Z4 198 aa25.08■■□□□ 1.61
CROCCP2-206ENST00000639594 ARHGEF40Q8TER5 1519 aa25.07■■□□□ 1.6
CROCCP2-206ENST00000639594 SBNO2Q9Y2G9 1366 aa25.06■■□□□ 1.6
CROCCP2-206ENST00000639594 QRICH2Q9H0J4 1663 aa25.06■■□□□ 1.6
CROCCP2-206ENST00000639594 CARD14Q9BXL6 1004 aa25.06■■□□□ 1.6
CROCCP2-206ENST00000639594 PLEKHH1Q9ULM0 1364 aa25.05■■□□□ 1.6
CROCCP2-206ENST00000639594 CENPJQ9HC77 1338 aaPredicted RBP25.05■■□□□ 1.6
CROCCP2-206ENST00000639594 TRHP20396 242 aaPredicted RBP25.04■■□□□ 1.6
CROCCP2-206ENST00000639594 C14orf93Q9H972 538 aaKnown RBP25.04■■□□□ 1.6
CROCCP2-206ENST00000639594 ADGRB1O14514 1584 aa25.03■■□□□ 1.6
CROCCP2-206ENST00000639594 TRAK1Q9UPV9 953 aa25.03■■□□□ 1.6
CROCCP2-206ENST00000639594 AGLP35573 1532 aa25.02■■□□□ 1.6
CROCCP2-206ENST00000639594 PLIN1O60240 522 aa25.02■■□□□ 1.6
CROCCP2-206ENST00000639594 PIK3C2BO00750 1634 aa25.02■■□□□ 1.6
CROCCP2-206ENST00000639594 RPGRIP1LQ68CZ1 1315 aa25.01■■□□□ 1.59
CROCCP2-206ENST00000639594 TMEM132EQ6IEE7 984 aa25■■□□□ 1.59
CROCCP2-206ENST00000639594 ZNF521Q96K83 1311 aa24.99■■□□□ 1.59
CROCCP2-206ENST00000639594 DUSP27Q5VZP5 1158 aa24.96■■□□□ 1.59
CROCCP2-206ENST00000639594 CCDC146Q8IYE0 955 aa24.96■■□□□ 1.59
CROCCP2-206ENST00000639594 ARHGAP31Q2M1Z3 1444 aa24.96■■□□□ 1.59
CROCCP2-206ENST00000639594 MLECQ14165 292 aa24.95■■□□□ 1.58
CROCCP2-206ENST00000639594 NEXMIFQ5QGS0 1516 aa24.94■■□□□ 1.58
CROCCP2-206ENST00000639594 CLTCQ00610 1675 aaKnown RBP24.94■■□□□ 1.58
CROCCP2-206ENST00000639594 GOLGA2Q08379 1002 aa24.94■■□□□ 1.58
CROCCP2-206ENST00000639594 NUTM2DQ5VT03 806 aaPredicted RBP24.94■■□□□ 1.58
CROCCP2-206ENST00000639594 MYO5BQ9ULV0 1848 aa24.93■■□□□ 1.58
CROCCP2-206ENST00000639594 ARHGEF28Q8N1W1 1705 aaKnown RBP24.93■■□□□ 1.58
CROCCP2-206ENST00000639594 CRBNQ96SW2 442 aa24.93■■□□□ 1.58
CROCCP2-206ENST00000639594 PREX1Q8TCU6 1659 aa24.92■■□□□ 1.58
CROCCP2-206ENST00000639594 SLC12A5Q9H2X9 1139 aa24.91■■□□□ 1.58
CROCCP2-206ENST00000639594 NSD3Q9BZ95 1437 aa24.91■■□□□ 1.58
CROCCP2-206ENST00000639594 APAF1O14727 1248 aa24.89■■□□□ 1.58
CROCCP2-206ENST00000639594 SLFN5Q08AF3 891 aa24.88■■□□□ 1.57
CROCCP2-206ENST00000639594 VGFO15240 615 aaPredicted RBP24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms