RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 CPS1P31327 1500 aa19.66■□□□□ 0.74
ATRIP-208ENST00000639561 SLIT1O75093 1534 aa19.66■□□□□ 0.74
ATRIP-208ENST00000639561 ARHGAP23Q9P227 1491 aa19.65■□□□□ 0.74
ATRIP-208ENST00000639561 SYNMO15061 1565 aa19.65■□□□□ 0.74
ATRIP-208ENST00000639561 NOS1P29475 1434 aa19.64■□□□□ 0.73
ATRIP-208ENST00000639561 SCAF11Q99590 1463 aaKnown RBP19.64■□□□□ 0.73
ATRIP-208ENST00000639561 L3MBTL2Q969R5 705 aa19.64■□□□□ 0.73
ATRIP-208ENST00000639561 DDX10Q13206 875 aaKnown RBP19.62■□□□□ 0.73
ATRIP-208ENST00000639561 IQGAP3Q86VI3 1631 aa19.62■□□□□ 0.73
ATRIP-208ENST00000639561 STAG3Q9UJ98 1225 aa19.61■□□□□ 0.73
ATRIP-208ENST00000639561 ADGRB3O60242 1522 aa19.61■□□□□ 0.73
ATRIP-208ENST00000639561 EID1Q9Y6B2 187 aa19.59■□□□□ 0.73
ATRIP-208ENST00000639561 SLC52A1Q9NWF4 448 aa19.58■□□□□ 0.73
ATRIP-208ENST00000639561 TMEM2Q9UHN6 1383 aa19.58■□□□□ 0.72
ATRIP-208ENST00000639561 IDI1Q13907 227 aa19.57■□□□□ 0.72
ATRIP-208ENST00000639561 TXNDC2Q86VQ3 553 aa19.57■□□□□ 0.72
ATRIP-208ENST00000639561 E9PCH4 1651 aa19.57■□□□□ 0.72
ATRIP-208ENST00000639561 NUP155O75694 1391 aa19.56■□□□□ 0.72
ATRIP-208ENST00000639561 UBAP1LF5GYI3 381 aa19.54■□□□□ 0.72
ATRIP-208ENST00000639561 LTKP29376 864 aa19.54■□□□□ 0.72
ATRIP-208ENST00000639561 STRCP1A6NGW2 1772 aa19.52■□□□□ 0.72
ATRIP-208ENST00000639561 NBPF8Q3BBV2 869 aa19.52■□□□□ 0.72
ATRIP-208ENST00000639561 MYO5BQ9ULV0 1848 aa19.51■□□□□ 0.71
ATRIP-208ENST00000639561 HSPA5P11021 654 aaKnown RBP19.5■□□□□ 0.71
ATRIP-208ENST00000639561 TMEM131LA2VDJ0 1609 aa19.49■□□□□ 0.71
ATRIP-208ENST00000639561 GTF3C3Q9Y5Q9 886 aa19.48■□□□□ 0.71
ATRIP-208ENST00000639561 LRRC7Q96NW7 1537 aa19.47■□□□□ 0.71
ATRIP-208ENST00000639561 TOM1O60784 492 aa19.47■□□□□ 0.71
ATRIP-208ENST00000639561 EIF4G2P78344 907 aaKnown RBP eCLIP19.46■□□□□ 0.71
ATRIP-208ENST00000639561 SPHKAPQ2M3C7 1700 aa19.46■□□□□ 0.71
ATRIP-208ENST00000639561 HDGFP51858 240 aaKnown RBP19.45■□□□□ 0.7
ATRIP-208ENST00000639561 ZFYVE9O95405 1425 aa19.44■□□□□ 0.7
ATRIP-208ENST00000639561 WASHC2AQ641Q2 1341 aa19.43■□□□□ 0.7
ATRIP-208ENST00000639561 RIMS2Q9UQ26 1411 aa19.43■□□□□ 0.7
ATRIP-208ENST00000639561 PLEKHG1Q9ULL1 1385 aa19.41■□□□□ 0.7
ATRIP-208ENST00000639561 CHGAP10645 457 aaKnown RBP19.4■□□□□ 0.7
ATRIP-208ENST00000639561 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.4■□□□□ 0.7
ATRIP-208ENST00000639561 SPATA31E1Q6ZUB1 1445 aa19.4■□□□□ 0.7
ATRIP-208ENST00000639561 NWD1Q149M9 1564 aa19.4■□□□□ 0.7
ATRIP-208ENST00000639561 XIRP1Q702N8 1843 aaKnown RBP19.39■□□□□ 0.69
ATRIP-208ENST00000639561 BCANQ96GW7 911 aa19.39■□□□□ 0.69
ATRIP-208ENST00000639561 NKTRP30414 1462 aaKnown RBP19.37■□□□□ 0.69
ATRIP-208ENST00000639561 ALKQ9UM73 1620 aa19.37■□□□□ 0.69
ATRIP-208ENST00000639561 KCNA6P17658 529 aa19.37■□□□□ 0.69
ATRIP-208ENST00000639561 PIP4K2BP78356 416 aa19.37■□□□□ 0.69
ATRIP-208ENST00000639561 SLC26A8Q96RN1 970 aa19.37■□□□□ 0.69
ATRIP-208ENST00000639561 C11orf95C9JLR9 678 aaPredicted RBP19.36■□□□□ 0.69
ATRIP-208ENST00000639561 ANP32CO43423 234 aa19.36■□□□□ 0.69
ATRIP-208ENST00000639561 DIP2AQ14689 1571 aa19.36■□□□□ 0.69
ATRIP-208ENST00000639561 TRPM2O94759 1503 aa19.35■□□□□ 0.69
ATRIP-208ENST00000639561 CHD2O14647 1828 aaKnown RBP19.35■□□□□ 0.69
ATRIP-208ENST00000639561 ZNF326Q5BKZ1 582 aaKnown RBP19.33■□□□□ 0.69
ATRIP-208ENST00000639561 KIF1BO60333 1816 aa19.33■□□□□ 0.68
ATRIP-208ENST00000639561 CLTCL1P53675 1640 aa19.32■□□□□ 0.68
ATRIP-208ENST00000639561 CCDC7Q96M83 1385 aa19.32■□□□□ 0.68
ATRIP-208ENST00000639561 CCER2I3L3R5 266 aa19.32■□□□□ 0.68
ATRIP-208ENST00000639561 DISP3Q9P2K9 1392 aa19.31■□□□□ 0.68
ATRIP-208ENST00000639561 TBX22Q9Y458 520 aa19.3■□□□□ 0.68
ATRIP-208ENST00000639561 TMEM94Q12767 1356 aa19.3■□□□□ 0.68
ATRIP-208ENST00000639561 RALGAPBQ86X10 1494 aa19.3■□□□□ 0.68
ATRIP-208ENST00000639561 CCDC144AA2RUR9 1427 aa19.3■□□□□ 0.68
ATRIP-208ENST00000639561 PROSER2Q86WR7 435 aaPredicted RBP19.29■□□□□ 0.68
ATRIP-208ENST00000639561 HSPA1LP34931 641 aa19.29■□□□□ 0.68
ATRIP-208ENST00000639561 PIK3R4Q99570 1358 aa19.28■□□□□ 0.68
ATRIP-208ENST00000639561 ADAMTS13Q76LX8 1427 aa19.28■□□□□ 0.68
ATRIP-208ENST00000639561 USP47Q96K76 1375 aa19.28■□□□□ 0.68
ATRIP-208ENST00000639561 KIF7Q2M1P5 1343 aa19.26■□□□□ 0.67
ATRIP-208ENST00000639561 NUTM2DQ5VT03 806 aaPredicted RBP19.26■□□□□ 0.67
ATRIP-208ENST00000639561 DCAF11Q8TEB1 546 aa19.26■□□□□ 0.67
ATRIP-208ENST00000639561 SETBP1Q9Y6X0 1596 aa19.26■□□□□ 0.67
ATRIP-208ENST00000639561 SENP3Q9H4L4 574 aaPredicted RBP19.25■□□□□ 0.67
ATRIP-208ENST00000639561 KDM2AQ9Y2K7 1162 aa19.25■□□□□ 0.67
ATRIP-208ENST00000639561 MSH6P52701 1360 aa19.24■□□□□ 0.67
ATRIP-208ENST00000639561 NEXMIFQ5QGS0 1516 aa19.24■□□□□ 0.67
ATRIP-208ENST00000639561 NRXN3Q9Y4C0 1643 aa19.23■□□□□ 0.67
ATRIP-208ENST00000639561 NCOA3Q9Y6Q9 1424 aa19.23■□□□□ 0.67
ATRIP-208ENST00000639561 FAM135BQ49AJ0 1406 aa19.21■□□□□ 0.67
ATRIP-208ENST00000639561 PRAG1Q86YV5 1406 aa19.19■□□□□ 0.66
ATRIP-208ENST00000639561 CARD11Q9BXL7 1154 aa19.19■□□□□ 0.66
ATRIP-208ENST00000639561 MED1Q15648 1581 aaPredicted RBP19.19■□□□□ 0.66
ATRIP-208ENST00000639561 RGL3Q3MIN7 710 aa19.19■□□□□ 0.66
ATRIP-208ENST00000639561 ROBO1Q9Y6N7 1651 aa19.19■□□□□ 0.66
ATRIP-208ENST00000639561 XRN1Q8IZH2 1706 aaKnown RBP19.19■□□□□ 0.66
ATRIP-208ENST00000639561 RBM33Q96EV2 1170 aaKnown RBP19.18■□□□□ 0.66
ATRIP-208ENST00000639561 TRPM1Q7Z4N2 1603 aa19.17■□□□□ 0.66
ATRIP-208ENST00000639561 RPGRIP1LQ68CZ1 1315 aa19.16■□□□□ 0.66
ATRIP-208ENST00000639561 PPLO60437 1756 aa19.16■□□□□ 0.66
ATRIP-208ENST00000639561 AMOTL2Q9Y2J4 779 aa19.15■□□□□ 0.66
ATRIP-208ENST00000639561 PTPRUQ92729 1446 aa19.15■□□□□ 0.66
ATRIP-208ENST00000639561 ROCK2O75116 1388 aaKnown RBP19.15■□□□□ 0.66
ATRIP-208ENST00000639561 C14orf37Q86TY3 774 aa19.14■□□□□ 0.66
ATRIP-208ENST00000639561 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.14■□□□□ 0.65
ATRIP-208ENST00000639561 VGFO15240 615 aaPredicted RBP19.14■□□□□ 0.65
ATRIP-208ENST00000639561 PRKRIP1Q9H875 184 aaPredicted RBP19.12■□□□□ 0.65
ATRIP-208ENST00000639561 ST20-MTHFSA0A0A6YYL1 179 aa19.11■□□□□ 0.65
ATRIP-208ENST00000639561 SETD1AO15047 1707 aaKnown RBP19.11■□□□□ 0.65
ATRIP-208ENST00000639561 SLAIN2Q9P270 581 aa19.11■□□□□ 0.65
ATRIP-208ENST00000639561 CADPS2Q86UW7 1296 aa19.1■□□□□ 0.65
ATRIP-208ENST00000639561 C19orf44Q9H6X5 657 aa19.1■□□□□ 0.65
ATRIP-208ENST00000639561 METP08581 1390 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms