RNA–Protein interactions for RNA: ENST00000638878.1

PAX6-242, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-242ENST00000638878 PIK3C2BO00750 1634 aa14.43□□□□□ -0.1
PAX6-242ENST00000638878 UBR1Q8IWV7 1749 aa14.43□□□□□ -0.1
PAX6-242ENST00000638878 STAG3Q9UJ98 1225 aa14.43□□□□□ -0.1
PAX6-242ENST00000638878 RAB3GAP2Q9H2M9 1393 aa14.43□□□□□ -0.1
PAX6-242ENST00000638878 TMEM2Q9UHN6 1383 aa14.43□□□□□ -0.1
PAX6-242ENST00000638878 DIEXFQ68CQ4 756 aaKnown RBP14.42□□□□□ -0.1
PAX6-242ENST00000638878 EID1Q9Y6B2 187 aa14.42□□□□□ -0.1
PAX6-242ENST00000638878 NPM3O75607 178 aaKnown RBP14.39□□□□□ -0.11
PAX6-242ENST00000638878 LTKP29376 864 aa14.39□□□□□ -0.11
PAX6-242ENST00000638878 TXNDC2Q86VQ3 553 aa14.39□□□□□ -0.11
PAX6-242ENST00000638878 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.39□□□□□ -0.11
PAX6-242ENST00000638878 ADGRB3O60242 1522 aa14.38□□□□□ -0.11
PAX6-242ENST00000638878 TMEM131LA2VDJ0 1609 aa14.38□□□□□ -0.11
PAX6-242ENST00000638878 TRPM2O94759 1503 aa14.37□□□□□ -0.11
PAX6-242ENST00000638878 SCAF11Q99590 1463 aaKnown RBP14.37□□□□□ -0.11
PAX6-242ENST00000638878 SPHKAPQ2M3C7 1700 aa14.37□□□□□ -0.11
PAX6-242ENST00000638878 NPHP4O75161 1426 aaPredicted RBP14.36□□□□□ -0.11
PAX6-242ENST00000638878 NEURL4Q96JN8 1562 aa14.36□□□□□ -0.11
PAX6-242ENST00000638878 POLR1AO95602 1720 aaPredicted RBP14.36□□□□□ -0.11
PAX6-242ENST00000638878 ZFYVE9O95405 1425 aa14.35□□□□□ -0.11
PAX6-242ENST00000638878 RPGRIP1LQ68CZ1 1315 aa14.34□□□□□ -0.11
PAX6-242ENST00000638878 ZNF316A6NFI3 1004 aaPredicted RBP14.34□□□□□ -0.11
PAX6-242ENST00000638878 NEUROD1Q13562 356 aa14.34□□□□□ -0.11
PAX6-242ENST00000638878 PLEKHG1Q9ULL1 1385 aa14.32□□□□□ -0.12
PAX6-242ENST00000638878 RIMS2Q9UQ26 1411 aa14.31□□□□□ -0.12
PAX6-242ENST00000638878 CHGAP10645 457 aaKnown RBP14.31□□□□□ -0.12
PAX6-242ENST00000638878 TBX22Q9Y458 520 aa14.31□□□□□ -0.12
PAX6-242ENST00000638878 IQGAP1P46940 1657 aa14.3□□□□□ -0.12
PAX6-242ENST00000638878 FOXD1Q16676 465 aa14.3□□□□□ -0.12
PAX6-242ENST00000638878 LTBP4Q8N2S1 1624 aa14.3□□□□□ -0.12
PAX6-242ENST00000638878 CCDC144AA2RUR9 1427 aa14.3□□□□□ -0.12
PAX6-242ENST00000638878 IQSEC2Q5JU85 1478 aa14.29□□□□□ -0.12
PAX6-242ENST00000638878 ANKRD30BQ9BXX2 1392 aa14.29□□□□□ -0.12
PAX6-242ENST00000638878 VGFO15240 615 aaPredicted RBP14.29□□□□□ -0.12
PAX6-242ENST00000638878 CLTCL1P53675 1640 aa14.29□□□□□ -0.12
PAX6-242ENST00000638878 STAC3Q96MF2 364 aa14.27□□□□□ -0.12
PAX6-242ENST00000638878 ZNF335Q9H4Z2 1342 aaPredicted RBP14.27□□□□□ -0.13
PAX6-242ENST00000638878 KIF1BO60333 1816 aa14.27□□□□□ -0.13
PAX6-242ENST00000638878 PIK3R4Q99570 1358 aa14.26□□□□□ -0.13
PAX6-242ENST00000638878 SPATA31E1Q6ZUB1 1445 aa14.26□□□□□ -0.13
PAX6-242ENST00000638878 PPP1R15AO75807 674 aaPredicted RBP14.26□□□□□ -0.13
PAX6-242ENST00000638878 ZNF326Q5BKZ1 582 aaKnown RBP14.26□□□□□ -0.13
PAX6-242ENST00000638878 CPS1P31327 1500 aa14.26□□□□□ -0.13
PAX6-242ENST00000638878 KCNA6P17658 529 aa14.25□□□□□ -0.13
PAX6-242ENST00000638878 MYO5BQ9ULV0 1848 aa14.25□□□□□ -0.13
PAX6-242ENST00000638878 GTF3C3Q9Y5Q9 886 aa14.24□□□□□ -0.13
PAX6-242ENST00000638878 SLC26A8Q96RN1 970 aa14.23□□□□□ -0.13
PAX6-242ENST00000638878 NEXMIFQ5QGS0 1516 aa14.23□□□□□ -0.13
PAX6-242ENST00000638878 ADAMTS13Q76LX8 1427 aa14.22□□□□□ -0.13
PAX6-242ENST00000638878 DIP2AQ14689 1571 aa14.22□□□□□ -0.13
PAX6-242ENST00000638878 SETBP1Q9Y6X0 1596 aa14.21□□□□□ -0.13
PAX6-242ENST00000638878 BCANQ96GW7 911 aa14.21□□□□□ -0.14
PAX6-242ENST00000638878 CLSPNQ9HAW4 1339 aa14.19□□□□□ -0.14
PAX6-242ENST00000638878 NCOA3Q9Y6Q9 1424 aa14.19□□□□□ -0.14
PAX6-242ENST00000638878 RGL3Q3MIN7 710 aa14.18□□□□□ -0.14
PAX6-242ENST00000638878 NUTM2DQ5VT03 806 aaPredicted RBP14.18□□□□□ -0.14
PAX6-242ENST00000638878 LRRC7Q96NW7 1537 aa14.16□□□□□ -0.14
PAX6-242ENST00000638878 NKTRP30414 1462 aaKnown RBP14.16□□□□□ -0.14
PAX6-242ENST00000638878 PPLO60437 1756 aa14.15□□□□□ -0.14
PAX6-242ENST00000638878 NWD1Q149M9 1564 aa14.15□□□□□ -0.14
PAX6-242ENST00000638878 CHD2O14647 1828 aaKnown RBP14.15□□□□□ -0.14
PAX6-242ENST00000638878 NRXN3Q9Y4C0 1643 aa14.14□□□□□ -0.15
PAX6-242ENST00000638878 STRCP1A6NGW2 1772 aa14.14□□□□□ -0.15
PAX6-242ENST00000638878 NRXN1Q9ULB1 1477 aa14.14□□□□□ -0.15
PAX6-242ENST00000638878 ADGRF5Q8IZF2 1346 aa14.13□□□□□ -0.15
PAX6-242ENST00000638878 TOM1O60784 492 aa14.13□□□□□ -0.15
PAX6-242ENST00000638878 PROSER2Q86WR7 435 aaPredicted RBP14.13□□□□□ -0.15
PAX6-242ENST00000638878 AMOTL2Q9Y2J4 779 aa14.13□□□□□ -0.15
PAX6-242ENST00000638878 MYOM2P54296 1465 aa14.13□□□□□ -0.15
PAX6-242ENST00000638878 PRAG1Q86YV5 1406 aa14.13□□□□□ -0.15
PAX6-242ENST00000638878 METP08581 1390 aa14.13□□□□□ -0.15
PAX6-242ENST00000638878 DHX57Q6P158 1386 aaKnown RBP14.13□□□□□ -0.15
PAX6-242ENST00000638878 UBAP1LF5GYI3 381 aa14.12□□□□□ -0.15
PAX6-242ENST00000638878 C14orf93Q9H972 538 aaKnown RBP14.12□□□□□ -0.15
PAX6-242ENST00000638878 IFT172Q9UG01 1749 aa14.12□□□□□ -0.15
PAX6-242ENST00000638878 ALKQ9UM73 1620 aa14.11□□□□□ -0.15
PAX6-242ENST00000638878 PIK3C2GO75747 1445 aa14.11□□□□□ -0.15
PAX6-242ENST00000638878 PTPRUQ92729 1446 aa14.1□□□□□ -0.15
PAX6-242ENST00000638878 SIRT1Q96EB6 747 aa14.1□□□□□ -0.15
PAX6-242ENST00000638878 DCAF11Q8TEB1 546 aa14.09□□□□□ -0.15
PAX6-242ENST00000638878 FOXD4L1Q9NU39 408 aa14.09□□□□□ -0.15
PAX6-242ENST00000638878 TMEM94Q12767 1356 aa14.09□□□□□ -0.15
PAX6-242ENST00000638878 C19orf44Q9H6X5 657 aa14.09□□□□□ -0.15
PAX6-242ENST00000638878 ABCC11Q96J66 1382 aa14.08□□□□□ -0.16
PAX6-242ENST00000638878 SETD1AO15047 1707 aaKnown RBP14.06□□□□□ -0.16
PAX6-242ENST00000638878 XRN1Q8IZH2 1706 aaKnown RBP14.06□□□□□ -0.16
PAX6-242ENST00000638878 TECPR2O15040 1411 aa14.05□□□□□ -0.16
PAX6-242ENST00000638878 PTCH1Q13635 1447 aa14.05□□□□□ -0.16
PAX6-242ENST00000638878 MSH6P52701 1360 aa14.05□□□□□ -0.16
PAX6-242ENST00000638878 XIRP1Q702N8 1843 aaKnown RBP14.04□□□□□ -0.16
PAX6-242ENST00000638878 LRPPRCP42704 1394 aaKnown RBP14.04□□□□□ -0.16
PAX6-242ENST00000638878 CADPS2Q86UW7 1296 aa14.04□□□□□ -0.16
PAX6-242ENST00000638878 LAMC1P11047 1609 aa14.03□□□□□ -0.16
PAX6-242ENST00000638878 DCCP43146 1447 aa14.03□□□□□ -0.16
PAX6-242ENST00000638878 CFAP70Q5T0N1 1121 aa14.03□□□□□ -0.16
PAX6-242ENST00000638878 SIN3AQ96ST3 1273 aa14.03□□□□□ -0.16
PAX6-242ENST00000638878 KDM2AQ9Y2K7 1162 aa14.03□□□□□ -0.16
PAX6-242ENST00000638878 FAM135BQ49AJ0 1406 aa14.02□□□□□ -0.16
PAX6-242ENST00000638878 L3MBTL2Q969R5 705 aa14.02□□□□□ -0.17
PAX6-242ENST00000638878 SLAIN2Q9P270 581 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms