RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 NAIPQ13075 1403 aa24.93■■□□□ 1.58
COLCA2-206ENST00000638573 DISP3Q9P2K9 1392 aa24.93■■□□□ 1.58
COLCA2-206ENST00000638573 MYO5BQ9ULV0 1848 aa24.92■■□□□ 1.58
COLCA2-206ENST00000638573 TMEM131LA2VDJ0 1609 aa24.92■■□□□ 1.58
COLCA2-206ENST00000638573 RIMS2Q9UQ26 1411 aa24.92■■□□□ 1.58
COLCA2-206ENST00000638573 TOM1O60784 492 aa24.91■■□□□ 1.58
COLCA2-206ENST00000638573 BCANQ96GW7 911 aa24.89■■□□□ 1.58
COLCA2-206ENST00000638573 ILDR2Q71H61 639 aa24.87■■□□□ 1.57
COLCA2-206ENST00000638573 PPP1R15AO75807 674 aaPredicted RBP24.84■■□□□ 1.57
COLCA2-206ENST00000638573 XIRP1Q702N8 1843 aaKnown RBP24.84■■□□□ 1.57
COLCA2-206ENST00000638573 TMEM94Q12767 1356 aa24.83■■□□□ 1.57
COLCA2-206ENST00000638573 PLEKHG1Q9ULL1 1385 aa24.83■■□□□ 1.57
COLCA2-206ENST00000638573 KCNA6P17658 529 aa24.83■■□□□ 1.57
COLCA2-206ENST00000638573 HFM1A2PYH4 1435 aa24.79■■□□□ 1.56
COLCA2-206ENST00000638573 PROSER2Q86WR7 435 aaPredicted RBP24.79■■□□□ 1.56
COLCA2-206ENST00000638573 ADAMTS13Q76LX8 1427 aa24.78■■□□□ 1.56
COLCA2-206ENST00000638573 TRIM52Q96A61 297 aa24.78■■□□□ 1.56
COLCA2-206ENST00000638573 NWD1Q149M9 1564 aa24.76■■□□□ 1.55
COLCA2-206ENST00000638573 SPHKAPQ2M3C7 1700 aa24.75■■□□□ 1.55
COLCA2-206ENST00000638573 CLTCL1P53675 1640 aa24.74■■□□□ 1.55
COLCA2-206ENST00000638573 FOXD1Q16676 465 aa24.72■■□□□ 1.55
COLCA2-206ENST00000638573 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.72■■□□□ 1.55
COLCA2-206ENST00000638573 TBX22Q9Y458 520 aa24.71■■□□□ 1.55
COLCA2-206ENST00000638573 NKTRP30414 1462 aaKnown RBP24.7■■□□□ 1.55
COLCA2-206ENST00000638573 HDGFP51858 240 aaKnown RBP24.7■■□□□ 1.54
COLCA2-206ENST00000638573 ZNF326Q5BKZ1 582 aaKnown RBP24.7■■□□□ 1.54
COLCA2-206ENST00000638573 PTPRUQ92729 1446 aa24.69■■□□□ 1.54
COLCA2-206ENST00000638573 TRPM2O94759 1503 aa24.68■■□□□ 1.54
COLCA2-206ENST00000638573 SLC4A1APQ9BWU0 796 aaKnown RBP24.67■■□□□ 1.54
COLCA2-206ENST00000638573 MED1Q15648 1581 aaPredicted RBP24.67■■□□□ 1.54
COLCA2-206ENST00000638573 NRXN3Q9Y4C0 1643 aa24.65■■□□□ 1.54
COLCA2-206ENST00000638573 CHD2O14647 1828 aaKnown RBP24.65■■□□□ 1.54
COLCA2-206ENST00000638573 NEXMIFQ5QGS0 1516 aa24.62■■□□□ 1.53
COLCA2-206ENST00000638573 AMOTL2Q9Y2J4 779 aa24.61■■□□□ 1.53
COLCA2-206ENST00000638573 METP08581 1390 aa24.61■■□□□ 1.53
COLCA2-206ENST00000638573 DIP2AQ14689 1571 aa24.6■■□□□ 1.53
COLCA2-206ENST00000638573 MSH6P52701 1360 aa24.6■■□□□ 1.53
COLCA2-206ENST00000638573 FAM135BQ49AJ0 1406 aa24.6■■□□□ 1.53
COLCA2-206ENST00000638573 SETBP1Q9Y6X0 1596 aa24.59■■□□□ 1.53
COLCA2-206ENST00000638573 ROBO1Q9Y6N7 1651 aa24.58■■□□□ 1.53
COLCA2-206ENST00000638573 C14orf37Q86TY3 774 aa24.56■■□□□ 1.52
COLCA2-206ENST00000638573 SLAIN2Q9P270 581 aa24.55■■□□□ 1.52
COLCA2-206ENST00000638573 PIK3R4Q99570 1358 aa24.54■■□□□ 1.52
COLCA2-206ENST00000638573 MPHOSPH9Q99550 1183 aa24.52■■□□□ 1.52
COLCA2-206ENST00000638573 XRN1Q8IZH2 1706 aaKnown RBP24.51■■□□□ 1.51
COLCA2-206ENST00000638573 KIF1BO60333 1816 aa24.49■■□□□ 1.51
COLCA2-206ENST00000638573 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.48■■□□□ 1.51
COLCA2-206ENST00000638573 SOCS7O14512 581 aa24.47■■□□□ 1.51
COLCA2-206ENST00000638573 RGL3Q3MIN7 710 aa24.47■■□□□ 1.51
COLCA2-206ENST00000638573 SETD5Q9C0A6 1442 aa24.46■■□□□ 1.51
COLCA2-206ENST00000638573 NCOA3Q9Y6Q9 1424 aa24.46■■□□□ 1.51
COLCA2-206ENST00000638573 C19orf44Q9H6X5 657 aa24.46■■□□□ 1.51
COLCA2-206ENST00000638573 PHF23Q9BUL5 403 aaPredicted RBP24.45■■□□□ 1.5
COLCA2-206ENST00000638573 RAB3GAP2Q9H2M9 1393 aa24.43■■□□□ 1.5
COLCA2-206ENST00000638573 ADGRF5Q8IZF2 1346 aa24.43■■□□□ 1.5
COLCA2-206ENST00000638573 ATF3P18847 181 aa24.43■■□□□ 1.5
COLCA2-206ENST00000638573 RGS17Q9UGC6 210 aaPredicted RBP24.43■■□□□ 1.5
COLCA2-206ENST00000638573 CCDC144AA2RUR9 1427 aa24.43■■□□□ 1.5
COLCA2-206ENST00000638573 SPATA31E1Q6ZUB1 1445 aa24.42■■□□□ 1.5
COLCA2-206ENST00000638573 SETD1AO15047 1707 aaKnown RBP24.41■■□□□ 1.5
COLCA2-206ENST00000638573 VGFO15240 615 aaPredicted RBP24.41■■□□□ 1.5
COLCA2-206ENST00000638573 CADPS2Q86UW7 1296 aa24.41■■□□□ 1.5
COLCA2-206ENST00000638573 ROBO2Q9HCK4 1378 aa24.41■■□□□ 1.5
COLCA2-206ENST00000638573 PPLO60437 1756 aa24.39■■□□□ 1.5
COLCA2-206ENST00000638573 PHLPP1O60346 1717 aa24.39■■□□□ 1.5
COLCA2-206ENST00000638573 BRINP3Q76B58 766 aa24.39■■□□□ 1.49
COLCA2-206ENST00000638573 RPGRIP1LQ68CZ1 1315 aa24.38■■□□□ 1.49
COLCA2-206ENST00000638573 MST1RQ04912 1400 aa24.37■■□□□ 1.49
COLCA2-206ENST00000638573 COL16A1Q07092 1604 aaPredicted RBP24.37■■□□□ 1.49
COLCA2-206ENST00000638573 DDX17Q92841 729 aaKnown RBP24.37■■□□□ 1.49
COLCA2-206ENST00000638573 ADGRL3Q9HAR2 1447 aa24.35■■□□□ 1.49
COLCA2-206ENST00000638573 NALCNQ8IZF0 1738 aa24.35■■□□□ 1.49
COLCA2-206ENST00000638573 DCCP43146 1447 aa24.33■■□□□ 1.49
COLCA2-206ENST00000638573 ASXL1Q8IXJ9 1541 aa24.31■■□□□ 1.48
COLCA2-206ENST00000638573 PTCH1Q13635 1447 aa24.31■■□□□ 1.48
COLCA2-206ENST00000638573 TMEM132EQ6IEE7 984 aa24.31■■□□□ 1.48
COLCA2-206ENST00000638573 AHDC1Q5TGY3 1603 aaPredicted RBP24.31■■□□□ 1.48
COLCA2-206ENST00000638573 JCADQ9P266 1359 aa24.3■■□□□ 1.48
COLCA2-206ENST00000638573 STK26Q9P289 416 aa24.3■■□□□ 1.48
COLCA2-206ENST00000638573 LRP6O75581 1613 aa24.3■■□□□ 1.48
COLCA2-206ENST00000638573 POTEAQ6S8J7 498 aa24.29■■□□□ 1.48
COLCA2-206ENST00000638573 IFT172Q9UG01 1749 aa24.27■■□□□ 1.48
COLCA2-206ENST00000638573 ANKRD30BQ9BXX2 1392 aa24.26■■□□□ 1.47
COLCA2-206ENST00000638573 WAPLQ7Z5K2 1190 aa24.25■■□□□ 1.47
COLCA2-206ENST00000638573 PLEKHH1Q9ULM0 1364 aa24.25■■□□□ 1.47
COLCA2-206ENST00000638573 PIK3C2GO75747 1445 aa24.25■■□□□ 1.47
COLCA2-206ENST00000638573 C1orf167Q5SNV9 1468 aa24.25■■□□□ 1.47
COLCA2-206ENST00000638573 ORAI2Q96SN7 254 aa24.24■■□□□ 1.47
COLCA2-206ENST00000638573 ACIN1Q9UKV3 1341 aaKnown RBP24.24■■□□□ 1.47
COLCA2-206ENST00000638573 PRAG1Q86YV5 1406 aa24.24■■□□□ 1.47
COLCA2-206ENST00000638573 NUTM2BA6NNL0 878 aaPredicted RBP24.2■■□□□ 1.46
COLCA2-206ENST00000638573 NUTM2EB1AL46 878 aaPredicted RBP24.2■■□□□ 1.46
COLCA2-206ENST00000638573 CFAP70Q5T0N1 1121 aa24.2■■□□□ 1.46
COLCA2-206ENST00000638573 NUTM2AQ8IVF1 878 aaPredicted RBP24.2■■□□□ 1.46
COLCA2-206ENST00000638573 LRPPRCP42704 1394 aaKnown RBP24.19■■□□□ 1.46
COLCA2-206ENST00000638573 NHSL1Q5SYE7 1610 aa24.18■■□□□ 1.46
COLCA2-206ENST00000638573 NUTM2FA1L443 756 aa24.18■■□□□ 1.46
COLCA2-206ENST00000638573 NRXN1Q9ULB1 1477 aa24.16■■□□□ 1.46
COLCA2-206ENST00000638573 TECPR2O15040 1411 aa24.16■■□□□ 1.46
COLCA2-206ENST00000638573 SPATA31A6Q5VVP1 1343 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms