RNA–Protein interactions for RNA: ENST00000638463.1

EGFR-211, Transcript of epidermal growth factor receptor, humanhuman

TSL 5 BASIC

Gene EGFR, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-211ENST00000638463 KIF3AQ9Y496 699 aa13.54□□□□□ -0.24
EGFR-211ENST00000638463 H3BQV1 296 aa13.53□□□□□ -0.24
EGFR-211ENST00000638463 IFFO2Q5TF58 517 aa13.53□□□□□ -0.24
EGFR-211ENST00000638463 CCDC70Q6NSX1 233 aa13.53□□□□□ -0.24
EGFR-211ENST00000638463 WDR97A6NE52 1622 aa13.53□□□□□ -0.24
EGFR-211ENST00000638463 CFTRP13569 1480 aa13.53□□□□□ -0.24
EGFR-211ENST00000638463 H0YHG0 523 aa13.53□□□□□ -0.24
EGFR-211ENST00000638463 SRPK2P78362 688 aaKnown RBP13.53□□□□□ -0.24
EGFR-211ENST00000638463 REC8O95072 547 aa13.53□□□□□ -0.24
EGFR-211ENST00000638463 RTF1Q92541 710 aaKnown RBP13.53□□□□□ -0.24
EGFR-211ENST00000638463 MYOM3Q5VTT5 1437 aa13.53□□□□□ -0.24
EGFR-211ENST00000638463 RILPL2Q969X0 211 aa13.52□□□□□ -0.24
EGFR-211ENST00000638463 ANKRD30AQ9BXX3 1397 aa13.52□□□□□ -0.24
EGFR-211ENST00000638463 ST20-MTHFSA0A0A6YYL1 179 aa13.52□□□□□ -0.25
EGFR-211ENST00000638463 SLC4A10Q6U841 1118 aa13.52□□□□□ -0.25
EGFR-211ENST00000638463 ZNF644Q9H582 1327 aaPredicted RBP13.52□□□□□ -0.25
EGFR-211ENST00000638463 TPD52L1Q16890 204 aaPredicted RBP13.52□□□□□ -0.25
EGFR-211ENST00000638463 NPHP1O15259 732 aa13.51□□□□□ -0.25
EGFR-211ENST00000638463 TAF3Q5VWG9 929 aa13.51□□□□□ -0.25
EGFR-211ENST00000638463 BICD2Q8TD16 824 aa13.51□□□□□ -0.25
EGFR-211ENST00000638463 CASKIN1Q8WXD9 1431 aa13.51□□□□□ -0.25
EGFR-211ENST00000638463 PES1O00541 588 aaKnown RBP13.51□□□□□ -0.25
EGFR-211ENST00000638463 HNRNPMP52272 730 aaKnown RBP eCLIP13.51□□□□□ -0.25
EGFR-211ENST00000638463 MPNDQ8N594 471 aa13.51□□□□□ -0.25
EGFR-211ENST00000638463 ACBD3Q9H3P7 528 aa13.51□□□□□ -0.25
EGFR-211ENST00000638463 SAFB2Q14151 953 aaKnown RBP eCLIP13.5□□□□□ -0.25
EGFR-211ENST00000638463 TSR1Q2NL82 804 aaKnown RBP13.5□□□□□ -0.25
EGFR-211ENST00000638463 ZHX1Q9UKY1 873 aaPredicted RBP13.5□□□□□ -0.25
EGFR-211ENST00000638463 ERCC6Q03468 1493 aa13.5□□□□□ -0.25
EGFR-211ENST00000638463 APAF1O14727 1248 aa13.5□□□□□ -0.25
EGFR-211ENST00000638463 SOX12O15370 315 aa13.5□□□□□ -0.25
EGFR-211ENST00000638463 RDXP35241 583 aaKnown RBP13.5□□□□□ -0.25
EGFR-211ENST00000638463 ZSCAN30Q86W11 494 aa13.5□□□□□ -0.25
EGFR-211ENST00000638463 FAM184AQ8NB25 1140 aa13.5□□□□□ -0.25
EGFR-211ENST00000638463 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.49□□□□□ -0.25
EGFR-211ENST00000638463 TPM1P09493 284 aa13.49□□□□□ -0.25
EGFR-211ENST00000638463 SASS6Q6UVJ0 657 aa13.49□□□□□ -0.25
EGFR-211ENST00000638463 MCM4P33991 863 aa13.49□□□□□ -0.25
EGFR-211ENST00000638463 TIAM1Q13009 1591 aa13.49□□□□□ -0.25
EGFR-211ENST00000638463 CLSTN1O94985 981 aa13.49□□□□□ -0.25
EGFR-211ENST00000638463 KIF7Q2M1P5 1343 aa13.49□□□□□ -0.25
EGFR-211ENST00000638463 GPATCH3Q96I76 525 aa13.49□□□□□ -0.25
EGFR-211ENST00000638463 CCDC7Q96M83 1385 aa13.49□□□□□ -0.25
EGFR-211ENST00000638463 NCOA2Q15596 1464 aa13.48□□□□□ -0.25
EGFR-211ENST00000638463 PRPF40AO75400 957 aaKnown RBP13.48□□□□□ -0.25
EGFR-211ENST00000638463 PDIA4P13667 645 aaKnown RBP13.48□□□□□ -0.25
EGFR-211ENST00000638463 MBD3O95983 291 aa13.48□□□□□ -0.25
EGFR-211ENST00000638463 STK31Q9BXU1 1019 aa13.48□□□□□ -0.25
EGFR-211ENST00000638463 PANK3Q9H999 370 aa13.48□□□□□ -0.25
EGFR-211ENST00000638463 USP47Q96K76 1375 aa13.48□□□□□ -0.25
EGFR-211ENST00000638463 LEKR1Q6ZMV7 388 aa13.48□□□□□ -0.25
EGFR-211ENST00000638463 LNPKQ9C0E8 428 aa13.48□□□□□ -0.25
EGFR-211ENST00000638463 ERICH4A6NGS2 130 aa13.47□□□□□ -0.25
EGFR-211ENST00000638463 CBX1P83916 185 aa13.47□□□□□ -0.25
EGFR-211ENST00000638463 DDX19BQ9UMR2 479 aa13.47□□□□□ -0.25
EGFR-211ENST00000638463 VPS37CA5D8V6 355 aaPredicted RBP13.47□□□□□ -0.25
EGFR-211ENST00000638463 AEBP1Q8IUX7 1158 aa13.47□□□□□ -0.25
EGFR-211ENST00000638463 RASSF8Q8NHQ8 419 aa13.47□□□□□ -0.25
EGFR-211ENST00000638463 TSPY26PQ9H489 355 aa13.47□□□□□ -0.25
EGFR-211ENST00000638463 GAPVD1Q14C86 1478 aa13.46□□□□□ -0.25
EGFR-211ENST00000638463 PDCL2Q8N4E4 241 aa13.46□□□□□ -0.25
EGFR-211ENST00000638463 TRIM5Q9C035 493 aa13.46□□□□□ -0.25
EGFR-211ENST00000638463 ELL2O00472 640 aaPredicted RBP13.46□□□□□ -0.25
EGFR-211ENST00000638463 TAF7LQ5H9L4 462 aa13.46□□□□□ -0.25
EGFR-211ENST00000638463 BICRAQ9NZM4 1560 aa13.46□□□□□ -0.25
EGFR-211ENST00000638463 NCBP3Q53F19 620 aaKnown RBP13.46□□□□□ -0.26
EGFR-211ENST00000638463 CGNQ9P2M7 1197 aaKnown RBP13.46□□□□□ -0.26
EGFR-211ENST00000638463 CCDC184Q52MB2 194 aa13.45□□□□□ -0.26
EGFR-211ENST00000638463 DZIP1LQ8IYY4 767 aaKnown RBP13.45□□□□□ -0.26
EGFR-211ENST00000638463 RUFY1Q96T51 708 aa13.45□□□□□ -0.26
EGFR-211ENST00000638463 CCDC112Q8NEF3 446 aa13.45□□□□□ -0.26
EGFR-211ENST00000638463 AK7Q96M32 723 aa13.45□□□□□ -0.26
EGFR-211ENST00000638463 CNTLNQ9NXG0 1405 aa13.45□□□□□ -0.26
EGFR-211ENST00000638463 FYCO1Q9BQS8 1478 aa13.44□□□□□ -0.26
EGFR-211ENST00000638463 IPO7O95373 1038 aaKnown RBP13.44□□□□□ -0.26
EGFR-211ENST00000638463 HSP90AB3PQ58FF7 597 aa13.44□□□□□ -0.26
EGFR-211ENST00000638463 GORABQ5T7V8 394 aa13.44□□□□□ -0.26
EGFR-211ENST00000638463 FBXW7Q969H0 707 aa13.44□□□□□ -0.26
EGFR-211ENST00000638463 CARMIL2Q6F5E8 1435 aa13.44□□□□□ -0.26
EGFR-211ENST00000638463 ANO2Q9NQ90 1003 aa13.44□□□□□ -0.26
EGFR-211ENST00000638463 PANK1Q8TE04 598 aa13.44□□□□□ -0.26
EGFR-211ENST00000638463 SMC3Q9UQE7 1217 aa13.44□□□□□ -0.26
EGFR-211ENST00000638463 SPC24Q8NBT2 197 aa13.44□□□□□ -0.26
EGFR-211ENST00000638463 SKIDA1Q1XH10 827 aa13.43□□□□□ -0.26
EGFR-211ENST00000638463 AKNAQ7Z591 1439 aa13.43□□□□□ -0.26
EGFR-211ENST00000638463 BBXQ8WY36 941 aaPredicted RBP13.43□□□□□ -0.26
EGFR-211ENST00000638463 DEF6Q9H4E7 631 aa13.43□□□□□ -0.26
EGFR-211ENST00000638463 CDCA7LQ96GN5 454 aa13.42□□□□□ -0.26
EGFR-211ENST00000638463 INTS3Q68E01 1043 aaKnown RBP13.42□□□□□ -0.26
EGFR-211ENST00000638463 JPH4Q96JJ6 628 aa13.41□□□□□ -0.26
EGFR-211ENST00000638463 TSPYL1Q9H0U9 437 aa13.41□□□□□ -0.26
EGFR-211ENST00000638463 NBPF8Q3BBV2 869 aa13.41□□□□□ -0.26
EGFR-211ENST00000638463 RRP12Q5JTH9 1297 aaKnown RBP13.41□□□□□ -0.26
EGFR-211ENST00000638463 HDGFL2Q7Z4V5 671 aaPredicted RBP13.41□□□□□ -0.26
EGFR-211ENST00000638463 CCDC191Q8NCU4 936 aa13.41□□□□□ -0.26
EGFR-211ENST00000638463 ZKSCAN1P17029 563 aaPredicted RBP13.4□□□□□ -0.26
EGFR-211ENST00000638463 HFM1A2PYH4 1435 aa13.4□□□□□ -0.26
EGFR-211ENST00000638463 LMOD2Q6P5Q4 547 aa13.39□□□□□ -0.27
EGFR-211ENST00000638463 CCDC73Q6ZRK6 1079 aa13.39□□□□□ -0.27
EGFR-211ENST00000638463 CEP89Q96ST8 783 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms