RNA–Protein interactions for RNA: ENST00000638454.1

PRAMEF13-202, Transcript of PRAME family member 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRAMEF13, Length 1,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF13-202ENST00000638454 SPRYD3Q8NCJ5 442 aa15.05■□□□□ -0
PRAMEF13-202ENST00000638454 CAPN15O75808 1086 aa15.04■□□□□ -0
PRAMEF13-202ENST00000638454 STAC3Q96MF2 364 aa15.04■□□□□ -0
PRAMEF13-202ENST00000638454 CAMSAP1Q5T5Y3 1602 aa15.04■□□□□ -0
PRAMEF13-202ENST00000638454 ARHGAP31Q2M1Z3 1444 aa15.03■□□□□ -0
PRAMEF13-202ENST00000638454 CNTLNQ9NXG0 1405 aa15.03■□□□□ -0
PRAMEF13-202ENST00000638454 PLA2R1Q13018 1463 aa15.03■□□□□ -0
PRAMEF13-202ENST00000638454 ZBTB12Q9Y330 459 aaPredicted RBP15.02■□□□□ -0
PRAMEF13-202ENST00000638454 ARID4BQ4LE39 1312 aaPredicted RBP15.01□□□□□ -0.01
PRAMEF13-202ENST00000638454 NEURL4Q96JN8 1562 aa15□□□□□ -0.01
PRAMEF13-202ENST00000638454 NPATQ14207 1427 aa15□□□□□ -0.01
PRAMEF13-202ENST00000638454 DCAF11Q8TEB1 546 aa14.98□□□□□ -0.01
PRAMEF13-202ENST00000638454 STAG3Q9UJ98 1225 aa14.98□□□□□ -0.01
PRAMEF13-202ENST00000638454 UHRF1BP1Q6BDS2 1440 aa14.98□□□□□ -0.01
PRAMEF13-202ENST00000638454 KIF1BO60333 1816 aa14.96□□□□□ -0.01
PRAMEF13-202ENST00000638454 CLTCL1P53675 1640 aa14.96□□□□□ -0.01
PRAMEF13-202ENST00000638454 RGL3Q3MIN7 710 aa14.96□□□□□ -0.01
PRAMEF13-202ENST00000638454 ZNF326Q5BKZ1 582 aaKnown RBP14.96□□□□□ -0.01
PRAMEF13-202ENST00000638454 PLCD3Q8N3E9 789 aa14.96□□□□□ -0.01
PRAMEF13-202ENST00000638454 SLC52A1Q9NWF4 448 aa14.95□□□□□ -0.02
PRAMEF13-202ENST00000638454 NOS1P29475 1434 aa14.95□□□□□ -0.02
PRAMEF13-202ENST00000638454 SPATA31E1Q6ZUB1 1445 aa14.95□□□□□ -0.02
PRAMEF13-202ENST00000638454 EIF4G2P78344 907 aaKnown RBP eCLIP14.94□□□□□ -0.02
PRAMEF13-202ENST00000638454 MLECQ14165 292 aa14.94□□□□□ -0.02
PRAMEF13-202ENST00000638454 RALGAPBQ86X10 1494 aa14.92□□□□□ -0.02
PRAMEF13-202ENST00000638454 CLTCQ00610 1675 aaKnown RBP14.92□□□□□ -0.02
PRAMEF13-202ENST00000638454 RPGRIP1LQ68CZ1 1315 aa14.91□□□□□ -0.02
PRAMEF13-202ENST00000638454 PREX1Q8TCU6 1659 aa14.91□□□□□ -0.02
PRAMEF13-202ENST00000638454 PRAG1Q86YV5 1406 aa14.9□□□□□ -0.02
PRAMEF13-202ENST00000638454 ABCB7O75027 752 aa14.9□□□□□ -0.02
PRAMEF13-202ENST00000638454 CHGAP10645 457 aaKnown RBP14.9□□□□□ -0.02
PRAMEF13-202ENST00000638454 NBPF8Q3BBV2 869 aa14.9□□□□□ -0.02
PRAMEF13-202ENST00000638454 DIEXFQ68CQ4 756 aaKnown RBP14.9□□□□□ -0.02
PRAMEF13-202ENST00000638454 ADGRB3O60242 1522 aa14.89□□□□□ -0.03
PRAMEF13-202ENST00000638454 ERVK-7P63135 1459 aa14.89□□□□□ -0.03
PRAMEF13-202ENST00000638454 ROCK2O75116 1388 aaKnown RBP14.88□□□□□ -0.03
PRAMEF13-202ENST00000638454 PIK3C2BO00750 1634 aa14.88□□□□□ -0.03
PRAMEF13-202ENST00000638454 MYOM2P54296 1465 aa14.88□□□□□ -0.03
PRAMEF13-202ENST00000638454 ZNF692Q9BU19 519 aaPredicted RBP14.88□□□□□ -0.03
PRAMEF13-202ENST00000638454 CARD11Q9BXL7 1154 aa14.88□□□□□ -0.03
PRAMEF13-202ENST00000638454 MROH2AA6NES4 1674 aa14.88□□□□□ -0.03
PRAMEF13-202ENST00000638454 CFAP65Q6ZU64 1925 aaKnown RBP14.88□□□□□ -0.03
PRAMEF13-202ENST00000638454 SIGLEC1Q9BZZ2 1709 aa14.87□□□□□ -0.03
PRAMEF13-202ENST00000638454 UGGT1Q9NYU2 1555 aa14.87□□□□□ -0.03
PRAMEF13-202ENST00000638454 ZMYM3Q14202 1370 aa14.87□□□□□ -0.03
PRAMEF13-202ENST00000638454 SYNMO15061 1565 aa14.86□□□□□ -0.03
PRAMEF13-202ENST00000638454 SPATA31D1Q6ZQQ2 1576 aa14.86□□□□□ -0.03
PRAMEF13-202ENST00000638454 MIER1Q8N108 512 aa14.86□□□□□ -0.03
PRAMEF13-202ENST00000638454 RNF39Q9H2S5 420 aa14.85□□□□□ -0.03
PRAMEF13-202ENST00000638454 USP47Q96K76 1375 aa14.84□□□□□ -0.03
PRAMEF13-202ENST00000638454 HSPA5P11021 654 aaKnown RBP14.84□□□□□ -0.03
PRAMEF13-202ENST00000638454 TRPM1Q7Z4N2 1603 aa14.84□□□□□ -0.03
PRAMEF13-202ENST00000638454 VGFO15240 615 aaPredicted RBP14.83□□□□□ -0.04
PRAMEF13-202ENST00000638454 LAMC1P11047 1609 aa14.83□□□□□ -0.04
PRAMEF13-202ENST00000638454 MADDQ8WXG6 1647 aa14.83□□□□□ -0.04
PRAMEF13-202ENST00000638454 GPRASP1Q5JY77 1395 aa14.82□□□□□ -0.04
PRAMEF13-202ENST00000638454 IDI1Q13907 227 aa14.82□□□□□ -0.04
PRAMEF13-202ENST00000638454 CIZ1Q9ULV3 898 aaPredicted RBP14.82□□□□□ -0.04
PRAMEF13-202ENST00000638454 FER1L4A9Z1Z3 1794 aa14.81□□□□□ -0.04
PRAMEF13-202ENST00000638454 HDGFP51858 240 aaKnown RBP14.81□□□□□ -0.04
PRAMEF13-202ENST00000638454 NBR1Q14596 966 aa14.81□□□□□ -0.04
PRAMEF13-202ENST00000638454 KIAA1210Q9ULL0 1709 aa14.81□□□□□ -0.04
PRAMEF13-202ENST00000638454 EIF3AQ14152 1382 aaKnown RBP14.8□□□□□ -0.04
PRAMEF13-202ENST00000638454 TNRQ92752 1358 aa14.8□□□□□ -0.04
PRAMEF13-202ENST00000638454 IFT172Q9UG01 1749 aa14.8□□□□□ -0.04
PRAMEF13-202ENST00000638454 FBXO31Q5XUX0 539 aaPredicted RBP14.8□□□□□ -0.04
PRAMEF13-202ENST00000638454 PPLO60437 1756 aa14.79□□□□□ -0.04
PRAMEF13-202ENST00000638454 SSUH2Q9Y2M2 353 aa14.79□□□□□ -0.04
PRAMEF13-202ENST00000638454 TMEM131LA2VDJ0 1609 aa14.78□□□□□ -0.04
PRAMEF13-202ENST00000638454 ZFYVE9O95405 1425 aa14.77□□□□□ -0.04
PRAMEF13-202ENST00000638454 NLRP1Q9C000 1473 aa14.77□□□□□ -0.04
PRAMEF13-202ENST00000638454 NRXN1Q9ULB1 1477 aa14.77□□□□□ -0.04
PRAMEF13-202ENST00000638454 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.76□□□□□ -0.05
PRAMEF13-202ENST00000638454 KDM5AP29375 1690 aaKnown RBP14.76□□□□□ -0.05
PRAMEF13-202ENST00000638454 HIRIP3Q9BW71 556 aaPredicted RBP14.75□□□□□ -0.05
PRAMEF13-202ENST00000638454 NEXMIFQ5QGS0 1516 aa14.75□□□□□ -0.05
PRAMEF13-202ENST00000638454 PIK3C2GO75747 1445 aa14.74□□□□□ -0.05
PRAMEF13-202ENST00000638454 SCAF11Q99590 1463 aaKnown RBP14.74□□□□□ -0.05
PRAMEF13-202ENST00000638454 SPDYE2BA6NHP3 402 aa14.73□□□□□ -0.05
PRAMEF13-202ENST00000638454 SPDYE6P0CI01 402 aa14.73□□□□□ -0.05
PRAMEF13-202ENST00000638454 SPDYE2Q495Y8 402 aa14.73□□□□□ -0.05
PRAMEF13-202ENST00000638454 ADGRF5Q8IZF2 1346 aa14.73□□□□□ -0.05
PRAMEF13-202ENST00000638454 SETBP1Q9Y6X0 1596 aa14.73□□□□□ -0.05
PRAMEF13-202ENST00000638454 A2ML1A8K2U0 1454 aa14.72□□□□□ -0.05
PRAMEF13-202ENST00000638454 POLR1AO95602 1720 aaPredicted RBP14.72□□□□□ -0.05
PRAMEF13-202ENST00000638454 C3P01024 1663 aa14.72□□□□□ -0.05
PRAMEF13-202ENST00000638454 NBPF1Q3BBV0 1214 aa14.72□□□□□ -0.05
PRAMEF13-202ENST00000638454 HS6ST3Q8IZP7 471 aa14.71□□□□□ -0.05
PRAMEF13-202ENST00000638454 C14orf93Q9H972 538 aaKnown RBP14.71□□□□□ -0.05
PRAMEF13-202ENST00000638454 CCDC7Q96M83 1385 aa14.7□□□□□ -0.06
PRAMEF13-202ENST00000638454 ST20-MTHFSA0A0A6YYL1 179 aa14.7□□□□□ -0.06
PRAMEF13-202ENST00000638454 C1QBPQ07021 282 aaKnown RBP14.7□□□□□ -0.06
PRAMEF13-202ENST00000638454 DDX10Q13206 875 aaKnown RBP14.7□□□□□ -0.06
PRAMEF13-202ENST00000638454 CDCA8Q53HL2 280 aa14.7□□□□□ -0.06
PRAMEF13-202ENST00000638454 RIMS2Q9UQ26 1411 aa14.7□□□□□ -0.06
PRAMEF13-202ENST00000638454 MYO5BQ9ULV0 1848 aa14.7□□□□□ -0.06
PRAMEF13-202ENST00000638454 CFAP70Q5T0N1 1121 aa14.69□□□□□ -0.06
PRAMEF13-202ENST00000638454 IQGAP1P46940 1657 aa14.69□□□□□ -0.06
PRAMEF13-202ENST00000638454 RIMS1Q86UR5 1692 aaKnown RBP14.69□□□□□ -0.06
PRAMEF13-202ENST00000638454 TMF1P82094 1093 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms