RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 NEUROD1Q13562 356 aa28.24■■■□□ 2.11
HLA-A-209ENST00000638375 NCKAP5LQ9HCH0 1330 aa28.23■■■□□ 2.11
HLA-A-209ENST00000638375 SCAF11Q99590 1463 aaKnown RBP28.23■■■□□ 2.11
HLA-A-209ENST00000638375 TXNDC2Q86VQ3 553 aa28.23■■■□□ 2.11
HLA-A-209ENST00000638375 ANKLE2Q86XL3 938 aa28.23■■■□□ 2.11
HLA-A-209ENST00000638375 STRCQ7RTU9 1775 aa28.22■■■□□ 2.11
HLA-A-209ENST00000638375 RPGRIP1LQ68CZ1 1315 aa28.21■■■□□ 2.11
HLA-A-209ENST00000638375 NUTM2DQ5VT03 806 aaPredicted RBP28.21■■■□□ 2.11
HLA-A-209ENST00000638375 EID1Q9Y6B2 187 aa28.2■■■□□ 2.1
HLA-A-209ENST00000638375 POLR1AO95602 1720 aaPredicted RBP28.19■■■□□ 2.1
HLA-A-209ENST00000638375 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.18■■■□□ 2.1
HLA-A-209ENST00000638375 PPLO60437 1756 aa28.18■■■□□ 2.1
HLA-A-209ENST00000638375 IFT172Q9UG01 1749 aa28.17■■■□□ 2.1
HLA-A-209ENST00000638375 MED14O60244 1454 aa28.16■■■□□ 2.1
HLA-A-209ENST00000638375 HDGFP51858 240 aaKnown RBP28.16■■■□□ 2.1
HLA-A-209ENST00000638375 PPP1R15AO75807 674 aaPredicted RBP28.15■■■□□ 2.1
HLA-A-209ENST00000638375 NPHP4O75161 1426 aaPredicted RBP28.14■■■□□ 2.1
HLA-A-209ENST00000638375 PLEKHG1Q9ULL1 1385 aa28.12■■■□□ 2.09
HLA-A-209ENST00000638375 VGFO15240 615 aaPredicted RBP28.11■■■□□ 2.09
HLA-A-209ENST00000638375 MYOM2P54296 1465 aa28.1■■■□□ 2.09
HLA-A-209ENST00000638375 L3MBTL2Q969R5 705 aa28.1■■■□□ 2.09
HLA-A-209ENST00000638375 SENP3Q9H4L4 574 aaPredicted RBP28.1■■■□□ 2.09
HLA-A-209ENST00000638375 ADGRF5Q8IZF2 1346 aa28.1■■■□□ 2.09
HLA-A-209ENST00000638375 DCAF11Q8TEB1 546 aa28.09■■■□□ 2.09
HLA-A-209ENST00000638375 IQGAP1P46940 1657 aa28.08■■■□□ 2.09
HLA-A-209ENST00000638375 TONSLQ96HA7 1378 aa28.07■■■□□ 2.08
HLA-A-209ENST00000638375 KDM2AQ9Y2K7 1162 aa28.06■■■□□ 2.08
HLA-A-209ENST00000638375 NRXN1Q9ULB1 1477 aa28.06■■■□□ 2.08
HLA-A-209ENST00000638375 NRXN3Q9Y4C0 1643 aa28.05■■■□□ 2.08
HLA-A-209ENST00000638375 SETBP1Q9Y6X0 1596 aa28.04■■■□□ 2.08
HLA-A-209ENST00000638375 ADAMTS13Q76LX8 1427 aa28.04■■■□□ 2.08
HLA-A-209ENST00000638375 DMRT2Q9Y5R5 561 aa28.03■■■□□ 2.08
HLA-A-209ENST00000638375 PIK3C2GO75747 1445 aa28.02■■■□□ 2.08
HLA-A-209ENST00000638375 BCANQ96GW7 911 aa28.02■■■□□ 2.08
HLA-A-209ENST00000638375 STAC3Q96MF2 364 aa28.02■■■□□ 2.08
HLA-A-209ENST00000638375 SLC26A8Q96RN1 970 aa28■■■□□ 2.07
HLA-A-209ENST00000638375 DIP2AQ14689 1571 aa27.96■■■□□ 2.07
HLA-A-209ENST00000638375 PRAG1Q86YV5 1406 aa27.96■■■□□ 2.07
HLA-A-209ENST00000638375 ALKQ9UM73 1620 aa27.96■■■□□ 2.07
HLA-A-209ENST00000638375 TBX22Q9Y458 520 aa27.95■■■□□ 2.06
HLA-A-209ENST00000638375 TIMELESSQ9UNS1 1208 aa27.94■■■□□ 2.06
HLA-A-209ENST00000638375 SETD1AO15047 1707 aaKnown RBP27.93■■■□□ 2.06
HLA-A-209ENST00000638375 C14orf93Q9H972 538 aaKnown RBP27.92■■■□□ 2.06
HLA-A-209ENST00000638375 CFAP70Q5T0N1 1121 aa27.91■■■□□ 2.06
HLA-A-209ENST00000638375 METP08581 1390 aa27.9■■■□□ 2.06
HLA-A-209ENST00000638375 NBPF8Q3BBV2 869 aa27.89■■■□□ 2.06
HLA-A-209ENST00000638375 ASXL1Q8IXJ9 1541 aa27.88■■■□□ 2.05
HLA-A-209ENST00000638375 LAMC1P11047 1609 aa27.87■■■□□ 2.05
HLA-A-209ENST00000638375 ZNF335Q9H4Z2 1342 aaPredicted RBP27.86■■■□□ 2.05
HLA-A-209ENST00000638375 PIK3R4Q99570 1358 aa27.86■■■□□ 2.05
HLA-A-209ENST00000638375 PTPRUQ92729 1446 aa27.85■■■□□ 2.05
HLA-A-209ENST00000638375 TMEM132EQ6IEE7 984 aa27.83■■■□□ 2.05
HLA-A-209ENST00000638375 ADGRB1O14514 1584 aa27.82■■■□□ 2.04
HLA-A-209ENST00000638375 KIAA1210Q9ULL0 1709 aa27.82■■■□□ 2.04
HLA-A-209ENST00000638375 NWD1Q149M9 1564 aa27.82■■■□□ 2.04
HLA-A-209ENST00000638375 KCNA6P17658 529 aa27.81■■■□□ 2.04
HLA-A-209ENST00000638375 TRPM1Q7Z4N2 1603 aa27.81■■■□□ 2.04
HLA-A-209ENST00000638375 STRCP1A6NGW2 1772 aa27.81■■■□□ 2.04
HLA-A-209ENST00000638375 CHD2O14647 1828 aaKnown RBP27.81■■■□□ 2.04
HLA-A-209ENST00000638375 NBPF1Q3BBV0 1214 aa27.79■■■□□ 2.04
HLA-A-209ENST00000638375 AMOTL2Q9Y2J4 779 aa27.78■■■□□ 2.04
HLA-A-209ENST00000638375 XRN1Q8IZH2 1706 aaKnown RBP27.78■■■□□ 2.04
HLA-A-209ENST00000638375 LTBP4Q8N2S1 1624 aa27.77■■■□□ 2.04
HLA-A-209ENST00000638375 YTHDC2Q9H6S0 1430 aaKnown RBP27.76■■■□□ 2.04
HLA-A-209ENST00000638375 LRPPRCP42704 1394 aaKnown RBP27.76■■■□□ 2.03
HLA-A-209ENST00000638375 RALGAPBQ86X10 1494 aa27.76■■■□□ 2.03
HLA-A-209ENST00000638375 NKTRP30414 1462 aaKnown RBP27.73■■■□□ 2.03
HLA-A-209ENST00000638375 STK26Q9P289 416 aa27.72■■■□□ 2.03
HLA-A-209ENST00000638375 ROCK2O75116 1388 aaKnown RBP27.72■■■□□ 2.03
HLA-A-209ENST00000638375 ABCC11Q96J66 1382 aa27.72■■■□□ 2.03
HLA-A-209ENST00000638375 TECPR2O15040 1411 aa27.71■■■□□ 2.03
HLA-A-209ENST00000638375 CPS1P31327 1500 aa27.71■■■□□ 2.03
HLA-A-209ENST00000638375 GPRASP1Q5JY77 1395 aa27.71■■■□□ 2.03
HLA-A-209ENST00000638375 ROBO2Q9HCK4 1378 aa27.69■■■□□ 2.02
HLA-A-209ENST00000638375 KNDC1Q76NI1 1749 aa27.69■■■□□ 2.02
HLA-A-209ENST00000638375 PTCH1Q13635 1447 aa27.68■■■□□ 2.02
HLA-A-209ENST00000638375 LRRC7Q96NW7 1537 aa27.67■■■□□ 2.02
HLA-A-209ENST00000638375 PROSER2Q86WR7 435 aaPredicted RBP27.65■■■□□ 2.02
HLA-A-209ENST00000638375 TRAK1Q9UPV9 953 aa27.65■■■□□ 2.02
HLA-A-209ENST00000638375 DLC1Q96QB1 1528 aa27.65■■■□□ 2.02
HLA-A-209ENST00000638375 RBM33Q96EV2 1170 aaKnown RBP27.63■■■□□ 2.01
HLA-A-209ENST00000638375 TMEM94Q12767 1356 aa27.62■■■□□ 2.01
HLA-A-209ENST00000638375 CARD11Q9BXL7 1154 aa27.62■■■□□ 2.01
HLA-A-209ENST00000638375 PLEKHH1Q9ULM0 1364 aa27.61■■■□□ 2.01
HLA-A-209ENST00000638375 FAM135BQ49AJ0 1406 aa27.61■■■□□ 2.01
HLA-A-209ENST00000638375 SIRT1Q96EB6 747 aa27.61■■■□□ 2.01
HLA-A-209ENST00000638375 WAPLQ7Z5K2 1190 aa27.6■■■□□ 2.01
HLA-A-209ENST00000638375 ARHGEF28Q8N1W1 1705 aaKnown RBP27.59■■■□□ 2.01
HLA-A-209ENST00000638375 XIRP1Q702N8 1843 aaKnown RBP27.57■■■□□ 2
HLA-A-209ENST00000638375 PRAM1Q96QH2 718 aa27.57■■■□□ 2
HLA-A-209ENST00000638375 NCOA3Q9Y6Q9 1424 aa27.55■■■□□ 2
HLA-A-209ENST00000638375 CERKQ8TCT0 537 aa27.53■■■□□ 2
HLA-A-209ENST00000638375 POGKQ9P215 609 aa27.53■■■□□ 2
HLA-A-209ENST00000638375 SAFB2Q14151 953 aaKnown RBP eCLIP27.52■■■□□ 2
HLA-A-209ENST00000638375 ADGRL3Q9HAR2 1447 aa27.51■■□□□ 1.99
HLA-A-209ENST00000638375 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.51■■□□□ 1.99
HLA-A-209ENST00000638375 ZEB1P37275 1124 aaPredicted RBP27.5■■□□□ 1.99
HLA-A-209ENST00000638375 NALCNQ8IZF0 1738 aa27.5■■□□□ 1.99
HLA-A-209ENST00000638375 EIF3AQ14152 1382 aaKnown RBP27.49■■□□□ 1.99
HLA-A-209ENST00000638375 IQSEC2Q5JU85 1478 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms