RNA–Protein interactions for RNA: ENST00000638304.1

GFAP-226, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,139 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-226ENST00000638304 NEURL4Q96JN8 1562 aa19.58■□□□□ 0.73
GFAP-226ENST00000638304 TMEM2Q9UHN6 1383 aa19.58■□□□□ 0.73
GFAP-226ENST00000638304 SETD1BQ9UPS6 1966 aaKnown RBP19.58■□□□□ 0.73
GFAP-226ENST00000638304 RIMS2Q9UQ26 1411 aa19.58■□□□□ 0.72
GFAP-226ENST00000638304 LTKP29376 864 aa19.58■□□□□ 0.72
GFAP-226ENST00000638304 HSPA2P54652 639 aa19.58■□□□□ 0.72
GFAP-226ENST00000638304 ZFYVE9O95405 1425 aa19.57■□□□□ 0.72
GFAP-226ENST00000638304 THEMISQ8N1K5 641 aaPredicted RBP19.57■□□□□ 0.72
GFAP-226ENST00000638304 RPGRIP1LQ68CZ1 1315 aa19.55■□□□□ 0.72
GFAP-226ENST00000638304 PRAG1Q86YV5 1406 aa19.55■□□□□ 0.72
GFAP-226ENST00000638304 ZNF142P52746 1687 aaPredicted RBP19.53■□□□□ 0.72
GFAP-226ENST00000638304 PPLO60437 1756 aa19.53■□□□□ 0.72
GFAP-226ENST00000638304 IFT172Q9UG01 1749 aa19.53■□□□□ 0.72
GFAP-226ENST00000638304 TXNDC2Q86VQ3 553 aa19.53■□□□□ 0.72
GFAP-226ENST00000638304 LMTK3Q96Q04 1460 aa19.52■□□□□ 0.72
GFAP-226ENST00000638304 VGFO15240 615 aaPredicted RBP19.52■□□□□ 0.72
GFAP-226ENST00000638304 NBPF1Q3BBV0 1214 aa19.52■□□□□ 0.72
GFAP-226ENST00000638304 MYOM2P54296 1465 aa19.51■□□□□ 0.71
GFAP-226ENST00000638304 KDM5AP29375 1690 aaKnown RBP19.51■□□□□ 0.71
GFAP-226ENST00000638304 ARHGAP23Q9P227 1491 aa19.51■□□□□ 0.71
GFAP-226ENST00000638304 CFAP70Q5T0N1 1121 aa19.51■□□□□ 0.71
GFAP-226ENST00000638304 SLIT1O75093 1534 aa19.5■□□□□ 0.71
GFAP-226ENST00000638304 NRXN1Q9ULB1 1477 aa19.49■□□□□ 0.71
GFAP-226ENST00000638304 PIK3C2GO75747 1445 aa19.49■□□□□ 0.71
GFAP-226ENST00000638304 EID1Q9Y6B2 187 aa19.48■□□□□ 0.71
GFAP-226ENST00000638304 NCKAP5LQ9HCH0 1330 aa19.47■□□□□ 0.71
GFAP-226ENST00000638304 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.46■□□□□ 0.71
GFAP-226ENST00000638304 BCANQ96GW7 911 aa19.46■□□□□ 0.71
GFAP-226ENST00000638304 TMEM132EQ6IEE7 984 aa19.46■□□□□ 0.71
GFAP-226ENST00000638304 SCAF11Q99590 1463 aaKnown RBP19.45■□□□□ 0.7
GFAP-226ENST00000638304 ANKLE2Q86XL3 938 aa19.45■□□□□ 0.7
GFAP-226ENST00000638304 STAC3Q96MF2 364 aa19.45■□□□□ 0.7
GFAP-226ENST00000638304 SLC26A8Q96RN1 970 aa19.45■□□□□ 0.7
GFAP-226ENST00000638304 HDGFP51858 240 aaKnown RBP19.43■□□□□ 0.7
GFAP-226ENST00000638304 ROCK2O75116 1388 aaKnown RBP19.43■□□□□ 0.7
GFAP-226ENST00000638304 C14orf93Q9H972 538 aaKnown RBP19.43■□□□□ 0.7
GFAP-226ENST00000638304 PLEKHG1Q9ULL1 1385 aa19.42■□□□□ 0.7
GFAP-226ENST00000638304 HIRIP3Q9BW71 556 aaPredicted RBP19.42■□□□□ 0.7
GFAP-226ENST00000638304 RALGAPBQ86X10 1494 aa19.41■□□□□ 0.7
GFAP-226ENST00000638304 TRPM1Q7Z4N2 1603 aa19.41■□□□□ 0.7
GFAP-226ENST00000638304 NRXN3Q9Y4C0 1643 aa19.41■□□□□ 0.7
GFAP-226ENST00000638304 ADAMTS13Q76LX8 1427 aa19.4■□□□□ 0.7
GFAP-226ENST00000638304 CARD11Q9BXL7 1154 aa19.4■□□□□ 0.7
GFAP-226ENST00000638304 METP08581 1390 aa19.39■□□□□ 0.69
GFAP-226ENST00000638304 IQGAP1P46940 1657 aa19.39■□□□□ 0.69
GFAP-226ENST00000638304 ALKQ9UM73 1620 aa19.39■□□□□ 0.69
GFAP-226ENST00000638304 ASXL1Q8IXJ9 1541 aa19.38■□□□□ 0.69
GFAP-226ENST00000638304 SETBP1Q9Y6X0 1596 aa19.37■□□□□ 0.69
GFAP-226ENST00000638304 STK26Q9P289 416 aa19.36■□□□□ 0.69
GFAP-226ENST00000638304 AEBP2Q6ZN18 517 aaPredicted RBP19.36■□□□□ 0.69
GFAP-226ENST00000638304 ADGRB1O14514 1584 aa19.36■□□□□ 0.69
GFAP-226ENST00000638304 NPHP4O75161 1426 aaPredicted RBP19.35■□□□□ 0.69
GFAP-226ENST00000638304 GPRASP1Q5JY77 1395 aa19.35■□□□□ 0.69
GFAP-226ENST00000638304 TRAK1Q9UPV9 953 aa19.34■□□□□ 0.69
GFAP-226ENST00000638304 MED14O60244 1454 aa19.34■□□□□ 0.69
GFAP-226ENST00000638304 SETD1AO15047 1707 aaKnown RBP19.32■□□□□ 0.68
GFAP-226ENST00000638304 HSPA5P11021 654 aaKnown RBP19.31■□□□□ 0.68
GFAP-226ENST00000638304 POLR1AO95602 1720 aaPredicted RBP19.31■□□□□ 0.68
GFAP-226ENST00000638304 STRCQ7RTU9 1775 aa19.31■□□□□ 0.68
GFAP-226ENST00000638304 USP47Q96K76 1375 aa19.31■□□□□ 0.68
GFAP-226ENST00000638304 TBX22Q9Y458 520 aa19.3■□□□□ 0.68
GFAP-226ENST00000638304 KIAA1210Q9ULL0 1709 aa19.3■□□□□ 0.68
GFAP-226ENST00000638304 PTPRUQ92729 1446 aa19.3■□□□□ 0.68
GFAP-226ENST00000638304 YTHDC2Q9H6S0 1430 aaKnown RBP19.29■□□□□ 0.68
GFAP-226ENST00000638304 ST20-MTHFSA0A0A6YYL1 179 aa19.28■□□□□ 0.68
GFAP-226ENST00000638304 EIF4G2P78344 907 aaKnown RBP eCLIP19.28■□□□□ 0.68
GFAP-226ENST00000638304 LAMC1P11047 1609 aa19.27■□□□□ 0.68
GFAP-226ENST00000638304 SAFB2Q14151 953 aaKnown RBP eCLIP19.27■□□□□ 0.68
GFAP-226ENST00000638304 AMOTL2Q9Y2J4 779 aa19.25■□□□□ 0.67
GFAP-226ENST00000638304 WAPLQ7Z5K2 1190 aa19.25■□□□□ 0.67
GFAP-226ENST00000638304 LRPPRCP42704 1394 aaKnown RBP19.24■□□□□ 0.67
GFAP-226ENST00000638304 KCNA6P17658 529 aa19.24■□□□□ 0.67
GFAP-226ENST00000638304 RBM33Q96EV2 1170 aaKnown RBP19.24■□□□□ 0.67
GFAP-226ENST00000638304 PLEKHH1Q9ULM0 1364 aa19.24■□□□□ 0.67
GFAP-226ENST00000638304 PRAM1Q96QH2 718 aa19.23■□□□□ 0.67
GFAP-226ENST00000638304 ROBO2Q9HCK4 1378 aa19.23■□□□□ 0.67
GFAP-226ENST00000638304 DIP2AQ14689 1571 aa19.22■□□□□ 0.67
GFAP-226ENST00000638304 ABCC11Q96J66 1382 aa19.21■□□□□ 0.67
GFAP-226ENST00000638304 C11orf95C9JLR9 678 aaPredicted RBP19.2■□□□□ 0.66
GFAP-226ENST00000638304 TESK2Q96S53 571 aa19.2■□□□□ 0.66
GFAP-226ENST00000638304 ZNF335Q9H4Z2 1342 aaPredicted RBP19.19■□□□□ 0.66
GFAP-226ENST00000638304 CENPJQ9HC77 1338 aaPredicted RBP19.18■□□□□ 0.66
GFAP-226ENST00000638304 POGKQ9P215 609 aa19.18■□□□□ 0.66
GFAP-226ENST00000638304 ARHGEF28Q8N1W1 1705 aaKnown RBP19.17■□□□□ 0.66
GFAP-226ENST00000638304 PIK3R4Q99570 1358 aa19.17■□□□□ 0.66
GFAP-226ENST00000638304 TECPR2O15040 1411 aa19.17■□□□□ 0.66
GFAP-226ENST00000638304 EIF3AQ14152 1382 aaKnown RBP19.16■□□□□ 0.66
GFAP-226ENST00000638304 MINK1Q8N4C8 1332 aaPredicted RBP19.16■□□□□ 0.66
GFAP-226ENST00000638304 XRN1Q8IZH2 1706 aaKnown RBP19.15■□□□□ 0.66
GFAP-226ENST00000638304 ZNF316A6NFI3 1004 aaPredicted RBP19.14■□□□□ 0.65
GFAP-226ENST00000638304 CHD2O14647 1828 aaKnown RBP19.14■□□□□ 0.65
GFAP-226ENST00000638304 DISP3Q9P2K9 1392 aa19.13■□□□□ 0.65
GFAP-226ENST00000638304 CPS1P31327 1500 aa19.13■□□□□ 0.65
GFAP-226ENST00000638304 DLC1Q96QB1 1528 aa19.13■□□□□ 0.65
GFAP-226ENST00000638304 STRCP1A6NGW2 1772 aa19.13■□□□□ 0.65
GFAP-226ENST00000638304 DMRT2Q9Y5R5 561 aa19.12■□□□□ 0.65
GFAP-226ENST00000638304 PTCH1Q13635 1447 aa19.12■□□□□ 0.65
GFAP-226ENST00000638304 POLR3GLQ9BT43 218 aa19.11■□□□□ 0.65
GFAP-226ENST00000638304 FAM135BQ49AJ0 1406 aa19.11■□□□□ 0.65
GFAP-226ENST00000638304 KNDC1Q76NI1 1749 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms