RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 E9PCH4 1651 aa30.58■■■□□ 2.49
CLN6-222ENST00000637667 RIMS2Q9UQ26 1411 aa30.58■■■□□ 2.49
CLN6-222ENST00000637667 BCANQ96GW7 911 aa30.58■■■□□ 2.49
CLN6-222ENST00000637667 HDGFP51858 240 aaKnown RBP30.57■■■□□ 2.48
CLN6-222ENST00000637667 TMEM131LA2VDJ0 1609 aa30.56■■■□□ 2.48
CLN6-222ENST00000637667 CHGAP10645 457 aaKnown RBP30.56■■■□□ 2.48
CLN6-222ENST00000637667 PPP1R15AO75807 674 aaPredicted RBP30.55■■■□□ 2.48
CLN6-222ENST00000637667 PLEKHG1Q9ULL1 1385 aa30.54■■■□□ 2.48
CLN6-222ENST00000637667 TMEM94Q12767 1356 aa30.53■■■□□ 2.48
CLN6-222ENST00000637667 SENP3Q9H4L4 574 aaPredicted RBP30.52■■■□□ 2.48
CLN6-222ENST00000637667 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.51■■■□□ 2.47
CLN6-222ENST00000637667 MYO5BQ9ULV0 1848 aa30.5■■■□□ 2.47
CLN6-222ENST00000637667 PROSER2Q86WR7 435 aaPredicted RBP30.5■■■□□ 2.47
CLN6-222ENST00000637667 XIRP1Q702N8 1843 aaKnown RBP30.48■■■□□ 2.47
CLN6-222ENST00000637667 NKTRP30414 1462 aaKnown RBP30.47■■■□□ 2.47
CLN6-222ENST00000637667 NWD1Q149M9 1564 aa30.45■■■□□ 2.47
CLN6-222ENST00000637667 NUTM2DQ5VT03 806 aaPredicted RBP30.44■■■□□ 2.46
CLN6-222ENST00000637667 RBM33Q96EV2 1170 aaKnown RBP30.44■■■□□ 2.46
CLN6-222ENST00000637667 TBX22Q9Y458 520 aa30.44■■■□□ 2.46
CLN6-222ENST00000637667 NAIPQ13075 1403 aa30.44■■■□□ 2.46
CLN6-222ENST00000637667 MED1Q15648 1581 aaPredicted RBP30.41■■■□□ 2.46
CLN6-222ENST00000637667 ADAMTS13Q76LX8 1427 aa30.39■■■□□ 2.45
CLN6-222ENST00000637667 FAM135BQ49AJ0 1406 aa30.38■■■□□ 2.45
CLN6-222ENST00000637667 MSH6P52701 1360 aa30.34■■■□□ 2.45
CLN6-222ENST00000637667 SPHKAPQ2M3C7 1700 aa30.33■■■□□ 2.45
CLN6-222ENST00000637667 HFM1A2PYH4 1435 aa30.33■■■□□ 2.45
CLN6-222ENST00000637667 CHD2O14647 1828 aaKnown RBP30.33■■■□□ 2.45
CLN6-222ENST00000637667 DIP2AQ14689 1571 aa30.32■■■□□ 2.44
CLN6-222ENST00000637667 PIK3R4Q99570 1358 aa30.31■■■□□ 2.44
CLN6-222ENST00000637667 ZNF326Q5BKZ1 582 aaKnown RBP30.29■■■□□ 2.44
CLN6-222ENST00000637667 TRIM52Q96A61 297 aa30.29■■■□□ 2.44
CLN6-222ENST00000637667 NCOA3Q9Y6Q9 1424 aa30.26■■■□□ 2.43
CLN6-222ENST00000637667 TRPM2O94759 1503 aa30.26■■■□□ 2.43
CLN6-222ENST00000637667 PHF23Q9BUL5 403 aaPredicted RBP30.25■■■□□ 2.43
CLN6-222ENST00000637667 SLAIN2Q9P270 581 aa30.25■■■□□ 2.43
CLN6-222ENST00000637667 C14orf37Q86TY3 774 aa30.23■■■□□ 2.43
CLN6-222ENST00000637667 CLTCL1P53675 1640 aa30.22■■■□□ 2.43
CLN6-222ENST00000637667 AMOTL2Q9Y2J4 779 aa30.22■■■□□ 2.43
CLN6-222ENST00000637667 ROBO1Q9Y6N7 1651 aa30.22■■■□□ 2.43
CLN6-222ENST00000637667 PTPRUQ92729 1446 aa30.21■■■□□ 2.43
CLN6-222ENST00000637667 SLC4A1APQ9BWU0 796 aaKnown RBP30.2■■■□□ 2.43
CLN6-222ENST00000637667 SETBP1Q9Y6X0 1596 aa30.2■■■□□ 2.42
CLN6-222ENST00000637667 C19orf44Q9H6X5 657 aa30.17■■■□□ 2.42
CLN6-222ENST00000637667 NRXN3Q9Y4C0 1643 aa30.17■■■□□ 2.42
CLN6-222ENST00000637667 NEXMIFQ5QGS0 1516 aa30.15■■■□□ 2.42
CLN6-222ENST00000637667 CADPS2Q86UW7 1296 aa30.14■■■□□ 2.42
CLN6-222ENST00000637667 METP08581 1390 aa30.13■■■□□ 2.41
CLN6-222ENST00000637667 ATF3P18847 181 aa30.12■■■□□ 2.41
CLN6-222ENST00000637667 KIF1BO60333 1816 aa30.09■■■□□ 2.41
CLN6-222ENST00000637667 XRN1Q8IZH2 1706 aaKnown RBP30.08■■■□□ 2.41
CLN6-222ENST00000637667 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.08■■■□□ 2.41
CLN6-222ENST00000637667 VGFO15240 615 aaPredicted RBP30.06■■■□□ 2.4
CLN6-222ENST00000637667 RPGRIP1LQ68CZ1 1315 aa30.05■■■□□ 2.4
CLN6-222ENST00000637667 FOXD1Q16676 465 aa30.05■■■□□ 2.4
CLN6-222ENST00000637667 RGS17Q9UGC6 210 aaPredicted RBP30.03■■■□□ 2.4
CLN6-222ENST00000637667 DCCP43146 1447 aa30.03■■■□□ 2.4
CLN6-222ENST00000637667 JCADQ9P266 1359 aa30.03■■■□□ 2.4
CLN6-222ENST00000637667 PHLPP1O60346 1717 aa30.02■■■□□ 2.4
CLN6-222ENST00000637667 MPHOSPH9Q99550 1183 aa29.99■■■□□ 2.39
CLN6-222ENST00000637667 BRINP3Q76B58 766 aa29.97■■■□□ 2.39
CLN6-222ENST00000637667 COL16A1Q07092 1604 aaPredicted RBP29.96■■■□□ 2.39
CLN6-222ENST00000637667 CCDC144AA2RUR9 1427 aa29.96■■■□□ 2.39
CLN6-222ENST00000637667 ADGRL3Q9HAR2 1447 aa29.96■■■□□ 2.39
CLN6-222ENST00000637667 AHDC1Q5TGY3 1603 aaPredicted RBP29.95■■■□□ 2.38
CLN6-222ENST00000637667 MST1RQ04912 1400 aa29.93■■■□□ 2.38
CLN6-222ENST00000637667 PTCH1Q13635 1447 aa29.91■■■□□ 2.38
CLN6-222ENST00000637667 ACIN1Q9UKV3 1341 aaKnown RBP29.9■■■□□ 2.38
CLN6-222ENST00000637667 SETD5Q9C0A6 1442 aa29.89■■■□□ 2.38
CLN6-222ENST00000637667 PPLO60437 1756 aa29.89■■■□□ 2.38
CLN6-222ENST00000637667 ROBO2Q9HCK4 1378 aa29.89■■■□□ 2.37
CLN6-222ENST00000637667 SPATA31E1Q6ZUB1 1445 aa29.88■■■□□ 2.37
CLN6-222ENST00000637667 SETD1AO15047 1707 aaKnown RBP29.88■■■□□ 2.37
CLN6-222ENST00000637667 RGL3Q3MIN7 710 aa29.88■■■□□ 2.37
CLN6-222ENST00000637667 ASXL1Q8IXJ9 1541 aa29.87■■■□□ 2.37
CLN6-222ENST00000637667 POTEAQ6S8J7 498 aa29.87■■■□□ 2.37
CLN6-222ENST00000637667 SPATA31A6Q5VVP1 1343 aa29.87■■■□□ 2.37
CLN6-222ENST00000637667 PRAG1Q86YV5 1406 aa29.87■■■□□ 2.37
CLN6-222ENST00000637667 ADGRF5Q8IZF2 1346 aa29.86■■■□□ 2.37
CLN6-222ENST00000637667 NALCNQ8IZF0 1738 aa29.83■■■□□ 2.37
CLN6-222ENST00000637667 ANKRD30BQ9BXX2 1392 aa29.83■■■□□ 2.37
CLN6-222ENST00000637667 LRP6O75581 1613 aa29.81■■■□□ 2.36
CLN6-222ENST00000637667 C1orf167Q5SNV9 1468 aa29.79■■■□□ 2.36
CLN6-222ENST00000637667 MEX3CQ5U5Q3 659 aaKnown RBP29.78■■■□□ 2.36
CLN6-222ENST00000637667 SHPRHQ149N8 1683 aa29.78■■■□□ 2.36
CLN6-222ENST00000637667 RAB3GAP2Q9H2M9 1393 aa29.77■■■□□ 2.36
CLN6-222ENST00000637667 DDX17Q92841 729 aaKnown RBP29.75■■■□□ 2.35
CLN6-222ENST00000637667 NHSL1Q5SYE7 1610 aa29.74■■■□□ 2.35
CLN6-222ENST00000637667 LRRC59Q96AG4 307 aaKnown RBP29.74■■■□□ 2.35
CLN6-222ENST00000637667 STK26Q9P289 416 aa29.72■■■□□ 2.35
CLN6-222ENST00000637667 PIK3C2GO75747 1445 aa29.71■■■□□ 2.35
CLN6-222ENST00000637667 NUTM2BA6NNL0 878 aaPredicted RBP29.71■■■□□ 2.35
CLN6-222ENST00000637667 NUTM2EB1AL46 878 aaPredicted RBP29.71■■■□□ 2.35
CLN6-222ENST00000637667 NUTM2AQ8IVF1 878 aaPredicted RBP29.71■■■□□ 2.35
CLN6-222ENST00000637667 LRPPRCP42704 1394 aaKnown RBP29.71■■■□□ 2.35
CLN6-222ENST00000637667 IFT172Q9UG01 1749 aa29.71■■■□□ 2.35
CLN6-222ENST00000637667 ORAI2Q96SN7 254 aa29.7■■■□□ 2.35
CLN6-222ENST00000637667 TECPR2O15040 1411 aa29.7■■■□□ 2.34
CLN6-222ENST00000637667 TMEM132EQ6IEE7 984 aa29.69■■■□□ 2.34
CLN6-222ENST00000637667 ABCC11Q96J66 1382 aa29.67■■■□□ 2.34
CLN6-222ENST00000637667 ZNF772Q68DY9 489 aaPredicted RBP29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms