RNA–Protein interactions for RNA: ENST00000637555.1

CNTNAP2-220, Transcript of contactin associated protein like 2, humanhuman

TSL 5

Gene CNTNAP2, Length 2,341 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-220ENST00000637555 MYOM2P54296 1465 aa18.12■□□□□ 0.49
CNTNAP2-220ENST00000637555 CEP170BQ9Y4F5 1589 aaPredicted RBP18.11■□□□□ 0.49
CNTNAP2-220ENST00000637555 KDM4FA0A1W2PPD8 638 aa18.1■□□□□ 0.49
CNTNAP2-220ENST00000637555 KIAA1210Q9ULL0 1709 aa18.09■□□□□ 0.49
CNTNAP2-220ENST00000637555 NRXN1Q9ULB1 1477 aa18.09■□□□□ 0.49
CNTNAP2-220ENST00000637555 PRAG1Q86YV5 1406 aa18.09■□□□□ 0.49
CNTNAP2-220ENST00000637555 DCAF11Q8TEB1 546 aa18.09■□□□□ 0.49
CNTNAP2-220ENST00000637555 NBPF8Q3BBV2 869 aa18.08■□□□□ 0.48
CNTNAP2-220ENST00000637555 PLPPR3Q6T4P5 718 aa18.08■□□□□ 0.48
CNTNAP2-220ENST00000637555 PELP1Q8IZL8 1130 aaKnown RBP18.08■□□□□ 0.48
CNTNAP2-220ENST00000637555 CHGAP10645 457 aaKnown RBP18.07■□□□□ 0.48
CNTNAP2-220ENST00000637555 RPGRIP1LQ68CZ1 1315 aa18.06■□□□□ 0.48
CNTNAP2-220ENST00000637555 ZFYVE9O95405 1425 aa18.05■□□□□ 0.48
CNTNAP2-220ENST00000637555 RALGAPBQ86X10 1494 aa18.05■□□□□ 0.48
CNTNAP2-220ENST00000637555 KDM2AQ9Y2K7 1162 aa18.04■□□□□ 0.48
CNTNAP2-220ENST00000637555 SLIT1O75093 1534 aa18.04■□□□□ 0.48
CNTNAP2-220ENST00000637555 ZNF326Q5BKZ1 582 aaKnown RBP18.04■□□□□ 0.48
CNTNAP2-220ENST00000637555 STAC3Q96MF2 364 aa18.03■□□□□ 0.48
CNTNAP2-220ENST00000637555 LAMC1P11047 1609 aa18.03■□□□□ 0.48
CNTNAP2-220ENST00000637555 ARHGAP23Q9P227 1491 aa18.03■□□□□ 0.48
CNTNAP2-220ENST00000637555 RIMS2Q9UQ26 1411 aa18.02■□□□□ 0.47
CNTNAP2-220ENST00000637555 SETD1AO15047 1707 aaKnown RBP18.02■□□□□ 0.47
CNTNAP2-220ENST00000637555 PIK3C2GO75747 1445 aa18.01■□□□□ 0.47
CNTNAP2-220ENST00000637555 NRXN3Q9Y4C0 1643 aa18.01■□□□□ 0.47
CNTNAP2-220ENST00000637555 ADGRF5Q8IZF2 1346 aa18■□□□□ 0.47
CNTNAP2-220ENST00000637555 STAG3Q9UJ98 1225 aa18■□□□□ 0.47
CNTNAP2-220ENST00000637555 IQGAP1P46940 1657 aa18■□□□□ 0.47
CNTNAP2-220ENST00000637555 TMEM2Q9UHN6 1383 aa18■□□□□ 0.47
CNTNAP2-220ENST00000637555 POLR1AO95602 1720 aaPredicted RBP17.98■□□□□ 0.47
CNTNAP2-220ENST00000637555 SETBP1Q9Y6X0 1596 aa17.97■□□□□ 0.47
CNTNAP2-220ENST00000637555 GPRASP1Q5JY77 1395 aa17.95■□□□□ 0.46
CNTNAP2-220ENST00000637555 VGFO15240 615 aaPredicted RBP17.95■□□□□ 0.46
CNTNAP2-220ENST00000637555 NUTM2DQ5VT03 806 aaPredicted RBP17.95■□□□□ 0.46
CNTNAP2-220ENST00000637555 HIRIP3Q9BW71 556 aaPredicted RBP17.95■□□□□ 0.46
CNTNAP2-220ENST00000637555 ALKQ9UM73 1620 aa17.94■□□□□ 0.46
CNTNAP2-220ENST00000637555 ADGRB1O14514 1584 aa17.93■□□□□ 0.46
CNTNAP2-220ENST00000637555 ASXL1Q8IXJ9 1541 aa17.93■□□□□ 0.46
CNTNAP2-220ENST00000637555 THEMISQ8N1K5 641 aaPredicted RBP17.93■□□□□ 0.46
CNTNAP2-220ENST00000637555 DDX10Q13206 875 aaKnown RBP17.92■□□□□ 0.46
CNTNAP2-220ENST00000637555 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.92■□□□□ 0.46
CNTNAP2-220ENST00000637555 SCAF11Q99590 1463 aaKnown RBP17.91■□□□□ 0.46
CNTNAP2-220ENST00000637555 NBPF1Q3BBV0 1214 aa17.9■□□□□ 0.46
CNTNAP2-220ENST00000637555 ROCK2O75116 1388 aaKnown RBP17.9■□□□□ 0.46
CNTNAP2-220ENST00000637555 LMTK3Q96Q04 1460 aa17.89■□□□□ 0.46
CNTNAP2-220ENST00000637555 LTKP29376 864 aa17.89■□□□□ 0.46
CNTNAP2-220ENST00000637555 C14orf93Q9H972 538 aaKnown RBP17.89■□□□□ 0.46
CNTNAP2-220ENST00000637555 PLEKHG1Q9ULL1 1385 aa17.89■□□□□ 0.45
CNTNAP2-220ENST00000637555 CFAP70Q5T0N1 1121 aa17.89■□□□□ 0.45
CNTNAP2-220ENST00000637555 ARHGEF28Q8N1W1 1705 aaKnown RBP17.88■□□□□ 0.45
CNTNAP2-220ENST00000637555 HDGFP51858 240 aaKnown RBP17.87■□□□□ 0.45
CNTNAP2-220ENST00000637555 MED14O60244 1454 aa17.87■□□□□ 0.45
CNTNAP2-220ENST00000637555 DIP2AQ14689 1571 aa17.86■□□□□ 0.45
CNTNAP2-220ENST00000637555 ADAMTS13Q76LX8 1427 aa17.86■□□□□ 0.45
CNTNAP2-220ENST00000637555 TXNDC2Q86VQ3 553 aa17.86■□□□□ 0.45
CNTNAP2-220ENST00000637555 KNDC1Q76NI1 1749 aa17.85■□□□□ 0.45
CNTNAP2-220ENST00000637555 CARD11Q9BXL7 1154 aa17.84■□□□□ 0.45
CNTNAP2-220ENST00000637555 USP47Q96K76 1375 aa17.84■□□□□ 0.45
CNTNAP2-220ENST00000637555 STRCQ7RTU9 1775 aa17.84■□□□□ 0.45
CNTNAP2-220ENST00000637555 EID1Q9Y6B2 187 aa17.84■□□□□ 0.45
CNTNAP2-220ENST00000637555 HSPA5P11021 654 aaKnown RBP17.82■□□□□ 0.44
CNTNAP2-220ENST00000637555 SENP3Q9H4L4 574 aaPredicted RBP17.81■□□□□ 0.44
CNTNAP2-220ENST00000637555 EIF4G2P78344 907 aaKnown RBP eCLIP17.81■□□□□ 0.44
CNTNAP2-220ENST00000637555 QRICH2Q9H0J4 1663 aa17.8■□□□□ 0.44
CNTNAP2-220ENST00000637555 ANKLE2Q86XL3 938 aa17.8■□□□□ 0.44
CNTNAP2-220ENST00000637555 CHD2O14647 1828 aaKnown RBP17.79■□□□□ 0.44
CNTNAP2-220ENST00000637555 TMEM132EQ6IEE7 984 aa17.79■□□□□ 0.44
CNTNAP2-220ENST00000637555 XRN1Q8IZH2 1706 aaKnown RBP17.79■□□□□ 0.44
CNTNAP2-220ENST00000637555 METP08581 1390 aa17.78■□□□□ 0.44
CNTNAP2-220ENST00000637555 YTHDC2Q9H6S0 1430 aaKnown RBP17.78■□□□□ 0.44
CNTNAP2-220ENST00000637555 NPHP4O75161 1426 aaPredicted RBP17.78■□□□□ 0.44
CNTNAP2-220ENST00000637555 SUPT16HQ9Y5B9 1047 aaKnown RBP17.77■□□□□ 0.44
CNTNAP2-220ENST00000637555 DLC1Q96QB1 1528 aa17.77■□□□□ 0.44
CNTNAP2-220ENST00000637555 CPS1P31327 1500 aa17.77■□□□□ 0.43
CNTNAP2-220ENST00000637555 LRPPRCP42704 1394 aaKnown RBP17.75■□□□□ 0.43
CNTNAP2-220ENST00000637555 NCKAP5LQ9HCH0 1330 aa17.75■□□□□ 0.43
CNTNAP2-220ENST00000637555 HSPA2P54652 639 aa17.75■□□□□ 0.43
CNTNAP2-220ENST00000637555 PTPRUQ92729 1446 aa17.74■□□□□ 0.43
CNTNAP2-220ENST00000637555 TBX22Q9Y458 520 aa17.74■□□□□ 0.43
CNTNAP2-220ENST00000637555 TECPR2O15040 1411 aa17.74■□□□□ 0.43
CNTNAP2-220ENST00000637555 EIF3AQ14152 1382 aaKnown RBP17.73■□□□□ 0.43
CNTNAP2-220ENST00000637555 ST20-MTHFSA0A0A6YYL1 179 aa17.73■□□□□ 0.43
CNTNAP2-220ENST00000637555 BCANQ96GW7 911 aa17.72■□□□□ 0.43
CNTNAP2-220ENST00000637555 SLC26A8Q96RN1 970 aa17.72■□□□□ 0.43
CNTNAP2-220ENST00000637555 NWD1Q149M9 1564 aa17.72■□□□□ 0.43
CNTNAP2-220ENST00000637555 ABCC11Q96J66 1382 aa17.72■□□□□ 0.43
CNTNAP2-220ENST00000637555 TRAK1Q9UPV9 953 aa17.71■□□□□ 0.43
CNTNAP2-220ENST00000637555 PIK3R4Q99570 1358 aa17.71■□□□□ 0.43
CNTNAP2-220ENST00000637555 TESK2Q96S53 571 aa17.7■□□□□ 0.42
CNTNAP2-220ENST00000637555 STRCP1A6NGW2 1772 aa17.7■□□□□ 0.42
CNTNAP2-220ENST00000637555 SBNO2Q9Y2G9 1366 aa17.68■□□□□ 0.42
CNTNAP2-220ENST00000637555 STK26Q9P289 416 aa17.68■□□□□ 0.42
CNTNAP2-220ENST00000637555 C11orf95C9JLR9 678 aaPredicted RBP17.67■□□□□ 0.42
CNTNAP2-220ENST00000637555 FAM135BQ49AJ0 1406 aa17.67■□□□□ 0.42
CNTNAP2-220ENST00000637555 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.66■□□□□ 0.42
CNTNAP2-220ENST00000637555 PTCH1Q13635 1447 aa17.66■□□□□ 0.42
CNTNAP2-220ENST00000637555 CENPJQ9HC77 1338 aaPredicted RBP17.66■□□□□ 0.42
CNTNAP2-220ENST00000637555 TULP4Q9NRJ4 1543 aa17.65■□□□□ 0.42
CNTNAP2-220ENST00000637555 ROBO2Q9HCK4 1378 aa17.65■□□□□ 0.42
CNTNAP2-220ENST00000637555 DISP3Q9P2K9 1392 aa17.65■□□□□ 0.42
CNTNAP2-220ENST00000637555 SIRT1Q96EB6 747 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms