RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-225ENST00000636861 ZNF518AQ6AHZ1 1483 aa5.68□□□□□ -1.5
CHD2-225ENST00000636861 WDR90Q96KV7 1748 aa5.68□□□□□ -1.5
CHD2-225ENST00000636861 CACNA1AO00555 2505 aa5.68□□□□□ -1.5
CHD2-225ENST00000636861 PPP1R1BQ9UD71 204 aaPredicted RBP5.67□□□□□ -1.5
CHD2-225ENST00000636861 NUP188Q5SRE5 1749 aa5.67□□□□□ -1.5
CHD2-225ENST00000636861 UGGT1Q9NYU2 1555 aa5.67□□□□□ -1.5
CHD2-225ENST00000636861 SF3B2Q13435 895 aaKnown RBP5.66□□□□□ -1.5
CHD2-225ENST00000636861 JMYQ8N9B5 988 aa5.66□□□□□ -1.5
CHD2-225ENST00000636861 USP21Q9UK80 565 aa5.66□□□□□ -1.5
CHD2-225ENST00000636861 TRPC5Q9UL62 973 aaPredicted RBP5.66□□□□□ -1.5
CHD2-225ENST00000636861 RREB1Q92766 1687 aa5.66□□□□□ -1.5
CHD2-225ENST00000636861 A2MP01023 1474 aa5.65□□□□□ -1.5
CHD2-225ENST00000636861 MLH3Q9UHC1 1453 aa5.65□□□□□ -1.5
CHD2-225ENST00000636861 PRDM15P57071 1507 aaPredicted RBP5.65□□□□□ -1.5
CHD2-225ENST00000636861 SZT2Q5T011 3432 aa5.65□□□□□ -1.5
CHD2-225ENST00000636861 LOC105371045A0A1W2PR82 267 aa5.65□□□□□ -1.5
CHD2-225ENST00000636861 CARMIL1Q5VZK9 1371 aa5.65□□□□□ -1.51
CHD2-225ENST00000636861 TNRQ92752 1358 aa5.65□□□□□ -1.51
CHD2-225ENST00000636861 RGPD1P0DJD0 1748 aa5.65□□□□□ -1.51
CHD2-225ENST00000636861 BAG6P46379 1132 aa5.64□□□□□ -1.51
CHD2-225ENST00000636861 FBXO31Q5XUX0 539 aaPredicted RBP5.64□□□□□ -1.51
CHD2-225ENST00000636861 MPNDQ8N594 471 aa5.64□□□□□ -1.51
CHD2-225ENST00000636861 PNPLA6Q8IY17 1366 aa5.64□□□□□ -1.51
CHD2-225ENST00000636861 SETD5Q9C0A6 1442 aa5.64□□□□□ -1.51
CHD2-225ENST00000636861 CASZ1Q86V15 1759 aa5.63□□□□□ -1.51
CHD2-225ENST00000636861 KCNQ2O43526 872 aa5.63□□□□□ -1.51
CHD2-225ENST00000636861 ADAMTS2O95450 1211 aa5.63□□□□□ -1.51
CHD2-225ENST00000636861 FNBP4Q8N3X1 1017 aaPredicted RBP5.63□□□□□ -1.51
CHD2-225ENST00000636861 ABCC3O15438 1527 aa5.63□□□□□ -1.51
CHD2-225ENST00000636861 FAM135AQ9P2D6 1515 aa5.63□□□□□ -1.51
CHD2-225ENST00000636861 DEKP35659 375 aaKnown RBP5.62□□□□□ -1.51
CHD2-225ENST00000636861 HTRA3P83110 453 aa5.62□□□□□ -1.51
CHD2-225ENST00000636861 EZH2Q15910 746 aaKnown RBP5.62□□□□□ -1.51
CHD2-225ENST00000636861 RTL5Q5HYW3 569 aaPredicted RBP5.62□□□□□ -1.51
CHD2-225ENST00000636861 PKNOX2Q96KN3 472 aa5.62□□□□□ -1.51
CHD2-225ENST00000636861 SPON1Q9HCB6 807 aa5.62□□□□□ -1.51
CHD2-225ENST00000636861 RBM19Q9Y4C8 960 aaKnown RBP5.62□□□□□ -1.51
CHD2-225ENST00000636861 DISP2A7MBM2 1401 aa5.62□□□□□ -1.51
CHD2-225ENST00000636861 COL6A3P12111 3177 aa5.62□□□□□ -1.51
CHD2-225ENST00000636861 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.61□□□□□ -1.51
CHD2-225ENST00000636861 PLXNC1O60486 1568 aa5.61□□□□□ -1.51
CHD2-225ENST00000636861 NUP153P49790 1475 aaKnown RBP5.61□□□□□ -1.51
CHD2-225ENST00000636861 APLP1P51693 650 aa5.61□□□□□ -1.51
CHD2-225ENST00000636861 MIER1Q8N108 512 aa5.61□□□□□ -1.51
CHD2-225ENST00000636861 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.61□□□□□ -1.51
CHD2-225ENST00000636861 ATP10DQ9P241 1426 aa5.61□□□□□ -1.51
CHD2-225ENST00000636861 NCOA2Q15596 1464 aa5.6□□□□□ -1.51
CHD2-225ENST00000636861 MSH6P52701 1360 aa5.6□□□□□ -1.51
CHD2-225ENST00000636861 LTKP29376 864 aa5.6□□□□□ -1.51
CHD2-225ENST00000636861 THEMISQ8N1K5 641 aaPredicted RBP5.6□□□□□ -1.51
CHD2-225ENST00000636861 KLRG1Q96E93 195 aa5.6□□□□□ -1.51
CHD2-225ENST00000636861 MYO5CQ9NQX4 1742 aa5.6□□□□□ -1.51
CHD2-225ENST00000636861 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.6□□□□□ -1.51
CHD2-225ENST00000636861 MARF1Q9Y4F3 1742 aaKnown RBP5.6□□□□□ -1.51
CHD2-225ENST00000636861 AATKQ6ZMQ8 1374 aa5.59□□□□□ -1.51
CHD2-225ENST00000636861 FAM83GA6ND36 823 aa5.59□□□□□ -1.51
CHD2-225ENST00000636861 PROSER2Q86WR7 435 aaPredicted RBP5.59□□□□□ -1.51
CHD2-225ENST00000636861 GJD4Q96KN9 370 aaPredicted RBP5.59□□□□□ -1.51
CHD2-225ENST00000636861 SYT17Q9BSW7 474 aa5.59□□□□□ -1.51
CHD2-225ENST00000636861 ANO8Q9HCE9 1232 aaPredicted RBP5.59□□□□□ -1.51
CHD2-225ENST00000636861 UBR1Q8IWV7 1749 aa5.59□□□□□ -1.51
CHD2-225ENST00000636861 NKTRP30414 1462 aaKnown RBP5.58□□□□□ -1.52
CHD2-225ENST00000636861 NLRP1Q9C000 1473 aa5.58□□□□□ -1.52
CHD2-225ENST00000636861 MLLT1Q03111 559 aaPredicted RBP5.58□□□□□ -1.52
CHD2-225ENST00000636861 BRINP3Q76B58 766 aa5.58□□□□□ -1.52
CHD2-225ENST00000636861 CAMKK2Q96RR4 588 aa5.58□□□□□ -1.52
CHD2-225ENST00000636861 FHDC1Q9C0D6 1143 aaPredicted RBP5.58□□□□□ -1.52
CHD2-225ENST00000636861 CDK11AQ9UQ88 783 aaPredicted RBP5.58□□□□□ -1.52
CHD2-225ENST00000636861 CTTNBP2Q8WZ74 1663 aa5.58□□□□□ -1.52
CHD2-225ENST00000636861 ASXL1Q8IXJ9 1541 aa5.58□□□□□ -1.52
CHD2-225ENST00000636861 DLC1Q96QB1 1528 aa5.58□□□□□ -1.52
CHD2-225ENST00000636861 PTGER2P43116 358 aa5.57□□□□□ -1.52
CHD2-225ENST00000636861 PDGFDQ9GZP0 370 aaPredicted RBP5.57□□□□□ -1.52
CHD2-225ENST00000636861 SAMD9LQ8IVG5 1584 aa5.57□□□□□ -1.52
CHD2-225ENST00000636861 EFCAB6Q5THR3 1501 aa5.57□□□□□ -1.52
CHD2-225ENST00000636861 PZPP20742 1482 aa5.57□□□□□ -1.52
CHD2-225ENST00000636861 MROH1Q8NDA8 1641 aa5.56□□□□□ -1.52
CHD2-225ENST00000636861 PITPNM2Q9BZ72 1349 aa5.56□□□□□ -1.52
CHD2-225ENST00000636861 HSPA1AP0DMV8 641 aaKnown RBP5.56□□□□□ -1.52
CHD2-225ENST00000636861 HSPA1BP0DMV9 641 aaKnown RBP5.56□□□□□ -1.52
CHD2-225ENST00000636861 KCNA6P17658 529 aa5.56□□□□□ -1.52
CHD2-225ENST00000636861 RGS19P49795 217 aa5.56□□□□□ -1.52
CHD2-225ENST00000636861 DDX17Q92841 729 aaKnown RBP5.56□□□□□ -1.52
CHD2-225ENST00000636861 GOLGA3Q08378 1498 aa5.56□□□□□ -1.52
CHD2-225ENST00000636861 MIA2Q96PC5 1412 aa5.56□□□□□ -1.52
CHD2-225ENST00000636861 KIF3CO14782 793 aa5.55□□□□□ -1.52
CHD2-225ENST00000636861 SEPT12Q8IYM1 358 aa5.55□□□□□ -1.52
CHD2-225ENST00000636861 SLIT1O75093 1534 aa5.54□□□□□ -1.52
CHD2-225ENST00000636861 TET3O43151 1660 aa5.54□□□□□ -1.52
CHD2-225ENST00000636861 DLL1O00548 723 aa5.54□□□□□ -1.52
CHD2-225ENST00000636861 HNRNPUL2Q1KMD3 747 aaKnown RBP5.54□□□□□ -1.52
CHD2-225ENST00000636861 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.54□□□□□ -1.525e-8■□□□□ 9.9
CHD2-225ENST00000636861 PODXL2Q9NZ53 605 aa5.54□□□□□ -1.52
CHD2-225ENST00000636861 SAMD9Q5K651 1589 aa5.54□□□□□ -1.52
CHD2-225ENST00000636861 CDC42BPBQ9Y5S2 1711 aa5.54□□□□□ -1.52
CHD2-225ENST00000636861 ADCY9O60503 1353 aa5.54□□□□□ -1.52
CHD2-225ENST00000636861 GPATCH8Q9UKJ3 1502 aaKnown RBP5.53□□□□□ -1.52
CHD2-225ENST00000636861 VCANP13611 3396 aa5.53□□□□□ -1.52
CHD2-225ENST00000636861 CHD2O14647 1828 aaKnown RBP5.53□□□□□ -1.52
CHD2-225ENST00000636861 FAM182BQ5T319 152 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms