RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 ADGRF5Q8IZF2 1346 aa15.34■□□□□ 0.05
CLN5-213ENST00000636681 KDM5AP29375 1690 aaKnown RBP15.33■□□□□ 0.04
CLN5-213ENST00000636681 TIMELESSQ9UNS1 1208 aa15.31■□□□□ 0.04
CLN5-213ENST00000636681 RIMS2Q9UQ26 1411 aa15.31■□□□□ 0.04
CLN5-213ENST00000636681 ZFYVE9O95405 1425 aa15.3■□□□□ 0.04
CLN5-213ENST00000636681 AEBP2Q6ZN18 517 aaPredicted RBP15.3■□□□□ 0.04
CLN5-213ENST00000636681 PRAG1Q86YV5 1406 aa15.3■□□□□ 0.04
CLN5-213ENST00000636681 TRPM1Q7Z4N2 1603 aa15.3■□□□□ 0.04
CLN5-213ENST00000636681 LTKP29376 864 aa15.29■□□□□ 0.04
CLN5-213ENST00000636681 UHRF1BP1Q6BDS2 1440 aa15.29■□□□□ 0.04
CLN5-213ENST00000636681 TMEM2Q9UHN6 1383 aa15.28■□□□□ 0.04
CLN5-213ENST00000636681 HSPA2P54652 639 aa15.28■□□□□ 0.04
CLN5-213ENST00000636681 IQGAP1P46940 1657 aa15.28■□□□□ 0.04
CLN5-213ENST00000636681 NBPF1Q3BBV0 1214 aa15.27■□□□□ 0.04
CLN5-213ENST00000636681 MYOM2P54296 1465 aa15.27■□□□□ 0.03
CLN5-213ENST00000636681 NRXN3Q9Y4C0 1643 aa15.26■□□□□ 0.03
CLN5-213ENST00000636681 ARHGAP23Q9P227 1491 aa15.26■□□□□ 0.03
CLN5-213ENST00000636681 NRXN1Q9ULB1 1477 aa15.26■□□□□ 0.03
CLN5-213ENST00000636681 RPGRIP1LQ68CZ1 1315 aa15.25■□□□□ 0.03
CLN5-213ENST00000636681 SLIT1O75093 1534 aa15.25■□□□□ 0.03
CLN5-213ENST00000636681 CFAP70Q5T0N1 1121 aa15.25■□□□□ 0.03
CLN5-213ENST00000636681 LMTK3Q96Q04 1460 aa15.24■□□□□ 0.03
CLN5-213ENST00000636681 THEMISQ8N1K5 641 aaPredicted RBP15.24■□□□□ 0.03
CLN5-213ENST00000636681 PIK3C2GO75747 1445 aa15.24■□□□□ 0.03
CLN5-213ENST00000636681 TXNDC2Q86VQ3 553 aa15.24■□□□□ 0.03
CLN5-213ENST00000636681 SETD1AO15047 1707 aaKnown RBP15.23■□□□□ 0.03
CLN5-213ENST00000636681 HIRIP3Q9BW71 556 aaPredicted RBP15.23■□□□□ 0.03
CLN5-213ENST00000636681 POLR1AO95602 1720 aaPredicted RBP15.23■□□□□ 0.03
CLN5-213ENST00000636681 VGFO15240 615 aaPredicted RBP15.22■□□□□ 0.03
CLN5-213ENST00000636681 RALGAPBQ86X10 1494 aa15.21■□□□□ 0.03
CLN5-213ENST00000636681 TMEM132EQ6IEE7 984 aa15.21■□□□□ 0.02
CLN5-213ENST00000636681 NCKAP5LQ9HCH0 1330 aa15.21■□□□□ 0.02
CLN5-213ENST00000636681 ASXL1Q8IXJ9 1541 aa15.21■□□□□ 0.02
CLN5-213ENST00000636681 ALKQ9UM73 1620 aa15.21■□□□□ 0.02
CLN5-213ENST00000636681 KIAA1210Q9ULL0 1709 aa15.21■□□□□ 0.02
CLN5-213ENST00000636681 SCAF11Q99590 1463 aaKnown RBP15.2■□□□□ 0.02
CLN5-213ENST00000636681 STRCQ7RTU9 1775 aa15.2■□□□□ 0.02
CLN5-213ENST00000636681 ROCK2O75116 1388 aaKnown RBP15.18■□□□□ 0.02
CLN5-213ENST00000636681 BCANQ96GW7 911 aa15.18■□□□□ 0.02
CLN5-213ENST00000636681 SLC26A8Q96RN1 970 aa15.18■□□□□ 0.02
CLN5-213ENST00000636681 ADGRB1O14514 1584 aa15.17■□□□□ 0.02
CLN5-213ENST00000636681 SETBP1Q9Y6X0 1596 aa15.17■□□□□ 0.02
CLN5-213ENST00000636681 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.17■□□□□ 0.02
CLN5-213ENST00000636681 C14orf93Q9H972 538 aaKnown RBP15.17■□□□□ 0.02
CLN5-213ENST00000636681 EID1Q9Y6B2 187 aa15.17■□□□□ 0.02
CLN5-213ENST00000636681 ADAMTS13Q76LX8 1427 aa15.17■□□□□ 0.02
CLN5-213ENST00000636681 PLEKHG1Q9ULL1 1385 aa15.16■□□□□ 0.02
CLN5-213ENST00000636681 ANKLE2Q86XL3 938 aa15.16■□□□□ 0.02
CLN5-213ENST00000636681 LAMC1P11047 1609 aa15.16■□□□□ 0.02
CLN5-213ENST00000636681 METP08581 1390 aa15.15■□□□□ 0.02
CLN5-213ENST00000636681 CARD11Q9BXL7 1154 aa15.15■□□□□ 0.02
CLN5-213ENST00000636681 STAC3Q96MF2 364 aa15.14■□□□□ 0.01
CLN5-213ENST00000636681 HSPA5P11021 654 aaKnown RBP15.13■□□□□ 0.01
CLN5-213ENST00000636681 STK26Q9P289 416 aa15.13■□□□□ 0.01
CLN5-213ENST00000636681 GPRASP1Q5JY77 1395 aa15.13■□□□□ 0.01
CLN5-213ENST00000636681 MED14O60244 1454 aa15.13■□□□□ 0.01
CLN5-213ENST00000636681 HDGFP51858 240 aaKnown RBP15.12■□□□□ 0.01
CLN5-213ENST00000636681 NPHP4O75161 1426 aaPredicted RBP15.12■□□□□ 0.01
CLN5-213ENST00000636681 ARHGEF28Q8N1W1 1705 aaKnown RBP15.12■□□□□ 0.01
CLN5-213ENST00000636681 TRAK1Q9UPV9 953 aa15.11■□□□□ 0.01
CLN5-213ENST00000636681 PTPRUQ92729 1446 aa15.11■□□□□ 0.01
CLN5-213ENST00000636681 USP47Q96K76 1375 aa15.11■□□□□ 0.01
CLN5-213ENST00000636681 CHD2O14647 1828 aaKnown RBP15.09■□□□□ 0.01
CLN5-213ENST00000636681 YTHDC2Q9H6S0 1430 aaKnown RBP15.08■□□□□ 0.01
CLN5-213ENST00000636681 STRCP1A6NGW2 1772 aa15.08■□□□□ 0
CLN5-213ENST00000636681 ST20-MTHFSA0A0A6YYL1 179 aa15.08■□□□□ 0
CLN5-213ENST00000636681 EIF4G2P78344 907 aaKnown RBP eCLIP15.06■□□□□ 0
CLN5-213ENST00000636681 SAFB2Q14151 953 aaKnown RBP eCLIP15.06■□□□□ 0
CLN5-213ENST00000636681 QRICH2Q9H0J4 1663 aa15.06■□□□□ 0
CLN5-213ENST00000636681 TBX22Q9Y458 520 aa15.06■□□□□ 0
CLN5-213ENST00000636681 DIP2AQ14689 1571 aa15.05■□□□□ 0
CLN5-213ENST00000636681 PLEKHH1Q9ULM0 1364 aa15.05■□□□□ 0
CLN5-213ENST00000636681 C11orf95C9JLR9 678 aaPredicted RBP15.05■□□□□ -0
CLN5-213ENST00000636681 KNDC1Q76NI1 1749 aa15.05■□□□□ -0
CLN5-213ENST00000636681 XRN1Q8IZH2 1706 aaKnown RBP15.05■□□□□ -0
CLN5-213ENST00000636681 WAPLQ7Z5K2 1190 aa15.04■□□□□ -0
CLN5-213ENST00000636681 RBM33Q96EV2 1170 aaKnown RBP15.03■□□□□ -0
CLN5-213ENST00000636681 LRPPRCP42704 1394 aaKnown RBP15.03■□□□□ -0
CLN5-213ENST00000636681 AMOTL2Q9Y2J4 779 aa15.03■□□□□ -0
CLN5-213ENST00000636681 ROBO2Q9HCK4 1378 aa15.02□□□□□ -0.01
CLN5-213ENST00000636681 ZNF316A6NFI3 1004 aaPredicted RBP15.01□□□□□ -0.01
CLN5-213ENST00000636681 KCNA6P17658 529 aa15.01□□□□□ -0.01
CLN5-213ENST00000636681 PRAM1Q96QH2 718 aa15.01□□□□□ -0.01
CLN5-213ENST00000636681 TESK2Q96S53 571 aa15.01□□□□□ -0.01
CLN5-213ENST00000636681 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.01□□□□□ -0.01
CLN5-213ENST00000636681 CPS1P31327 1500 aa15.01□□□□□ -0.01
CLN5-213ENST00000636681 ABCC11Q96J66 1382 aa14.99□□□□□ -0.01
CLN5-213ENST00000636681 DISP3Q9P2K9 1392 aa14.99□□□□□ -0.01
CLN5-213ENST00000636681 CENPJQ9HC77 1338 aaPredicted RBP14.99□□□□□ -0.01
CLN5-213ENST00000636681 MINK1Q8N4C8 1332 aaPredicted RBP14.98□□□□□ -0.01
CLN5-213ENST00000636681 DLC1Q96QB1 1528 aa14.98□□□□□ -0.01
CLN5-213ENST00000636681 TECPR2O15040 1411 aa14.97□□□□□ -0.01
CLN5-213ENST00000636681 ZNF335Q9H4Z2 1342 aaPredicted RBP14.97□□□□□ -0.01
CLN5-213ENST00000636681 NWD1Q149M9 1564 aa14.97□□□□□ -0.01
CLN5-213ENST00000636681 XIRP1Q702N8 1843 aaKnown RBP14.96□□□□□ -0.01
CLN5-213ENST00000636681 POGKQ9P215 609 aa14.96□□□□□ -0.01
CLN5-213ENST00000636681 POLR3GLQ9BT43 218 aa14.96□□□□□ -0.02
CLN5-213ENST00000636681 TULP4Q9NRJ4 1543 aa14.95□□□□□ -0.02
CLN5-213ENST00000636681 EIF3AQ14152 1382 aaKnown RBP14.95□□□□□ -0.02
CLN5-213ENST00000636681 NALCNQ8IZF0 1738 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms