RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 TMEM132EQ6IEE7 984 aa18.33■□□□□ 0.52
CACNA1A-228ENST00000636610 SAFB2Q14151 953 aaKnown RBP eCLIP18.33■□□□□ 0.52
CACNA1A-228ENST00000636610 CARD14Q9BXL6 1004 aa18.33■□□□□ 0.52
CACNA1A-228ENST00000636610 BCL2L13Q9BXK5 485 aa18.32■□□□□ 0.52
CACNA1A-228ENST00000636610 CANXP27824 592 aaKnown RBP18.32■□□□□ 0.52
CACNA1A-228ENST00000636610 DAXXQ9UER7 740 aaPredicted RBP18.31■□□□□ 0.52
CACNA1A-228ENST00000636610 PLCH2O75038 1416 aa18.31■□□□□ 0.52
CACNA1A-228ENST00000636610 CHD1O14646 1710 aa18.31■□□□□ 0.52
CACNA1A-228ENST00000636610 MYO5CQ9NQX4 1742 aa18.31■□□□□ 0.52
CACNA1A-228ENST00000636610 DUOX2Q9NRD8 1548 aa18.31■□□□□ 0.52
CACNA1A-228ENST00000636610 MS4A1P11836 297 aa18.31■□□□□ 0.52
CACNA1A-228ENST00000636610 SCAPERQ9BY12 1400 aa18.31■□□□□ 0.52
CACNA1A-228ENST00000636610 CDCA8Q53HL2 280 aa18.31■□□□□ 0.52
CACNA1A-228ENST00000636610 SLFN5Q08AF3 891 aa18.3■□□□□ 0.52
CACNA1A-228ENST00000636610 GGT6Q6P531 493 aa18.3■□□□□ 0.52
CACNA1A-228ENST00000636610 PANK1Q8TE04 598 aa18.29■□□□□ 0.52
CACNA1A-228ENST00000636610 UNC13BO14795 1591 aa18.29■□□□□ 0.52
CACNA1A-228ENST00000636610 SLC12A5Q9H2X9 1139 aa18.29■□□□□ 0.52
CACNA1A-228ENST00000636610 UGGT1Q9NYU2 1555 aa18.29■□□□□ 0.52
CACNA1A-228ENST00000636610 IL27Q8NEV9 243 aa18.28■□□□□ 0.52
CACNA1A-228ENST00000636610 COG6Q9Y2V7 657 aa18.28■□□□□ 0.52
CACNA1A-228ENST00000636610 ZMYM4Q5VZL5 1548 aa18.27■□□□□ 0.51
CACNA1A-228ENST00000636610 ABCC2Q92887 1545 aa18.27■□□□□ 0.51
CACNA1A-228ENST00000636610 IQGAP3Q86VI3 1631 aa18.26■□□□□ 0.51
CACNA1A-228ENST00000636610 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.26■□□□□ 0.51
CACNA1A-228ENST00000636610 MAST1Q9Y2H9 1570 aa18.26■□□□□ 0.51
CACNA1A-228ENST00000636610 CLUAP1Q96AJ1 413 aa18.26■□□□□ 0.51
CACNA1A-228ENST00000636610 ATP10AO60312 1499 aa18.26■□□□□ 0.51
CACNA1A-228ENST00000636610 KDM2BQ8NHM5 1336 aa18.25■□□□□ 0.51
CACNA1A-228ENST00000636610 CENPQQ7L2Z9 268 aaPredicted RBP18.25■□□□□ 0.51
CACNA1A-228ENST00000636610 TNNQ9UQP3 1299 aa18.25■□□□□ 0.51
CACNA1A-228ENST00000636610 IGHDP01880 384 aa18.25■□□□□ 0.51
CACNA1A-228ENST00000636610 SCAF11Q99590 1463 aaKnown RBP18.24■□□□□ 0.51
CACNA1A-228ENST00000636610 ZNF521Q96K83 1311 aa18.24■□□□□ 0.51
CACNA1A-228ENST00000636610 MORC1Q86VD1 984 aa18.23■□□□□ 0.51
CACNA1A-228ENST00000636610 KANK1Q14678 1352 aa18.22■□□□□ 0.51
CACNA1A-228ENST00000636610 C8orf34Q49A92 452 aa18.22■□□□□ 0.51
CACNA1A-228ENST00000636610 EIF2AK4Q9P2K8 1649 aaKnown RBP18.21■□□□□ 0.51
CACNA1A-228ENST00000636610 FAM161AQ3B820 660 aa18.2■□□□□ 0.5
CACNA1A-228ENST00000636610 CFAP65Q6ZU64 1925 aaKnown RBP18.2■□□□□ 0.5
CACNA1A-228ENST00000636610 ASXL1Q8IXJ9 1541 aa18.19■□□□□ 0.5
CACNA1A-228ENST00000636610 PLXNC1O60486 1568 aa18.19■□□□□ 0.5
CACNA1A-228ENST00000636610 EIF3AQ14152 1382 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-228ENST00000636610 WWC1Q8IX03 1113 aa18.18■□□□□ 0.5
CACNA1A-228ENST00000636610 STK26Q9P289 416 aa18.18■□□□□ 0.5
CACNA1A-228ENST00000636610 MADDQ8WXG6 1647 aa18.18■□□□□ 0.5
CACNA1A-228ENST00000636610 NFKBIBQ15653 356 aa18.17■□□□□ 0.5
CACNA1A-228ENST00000636610 E9PSI1 815 aa18.17■□□□□ 0.5
CACNA1A-228ENST00000636610 DDRGK1Q96HY6 314 aa18.17■□□□□ 0.5
CACNA1A-228ENST00000636610 CENPJQ9HC77 1338 aaPredicted RBP18.17■□□□□ 0.5
CACNA1A-228ENST00000636610 ABCC1P33527 1531 aa18.17■□□□□ 0.5
CACNA1A-228ENST00000636610 CLTCL1P53675 1640 aa18.17■□□□□ 0.5
CACNA1A-228ENST00000636610 SEC24BO95487 1268 aa18.16■□□□□ 0.5
CACNA1A-228ENST00000636610 ZCCHC11Q5TAX3 1644 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-228ENST00000636610 MTHFSP49914 203 aa18.16■□□□□ 0.5
CACNA1A-228ENST00000636610 TCP11L2Q8N4U5 519 aa18.16■□□□□ 0.5
CACNA1A-228ENST00000636610 PPM1GO15355 546 aaPredicted RBP18.15■□□□□ 0.5
CACNA1A-228ENST00000636610 FANCAO15360 1455 aa18.14■□□□□ 0.5
CACNA1A-228ENST00000636610 NOS1P29475 1434 aa18.13■□□□□ 0.49
CACNA1A-228ENST00000636610 RLBP1P12271 317 aa18.13■□□□□ 0.49
CACNA1A-228ENST00000636610 CABP2Q9NPB3 220 aa18.13■□□□□ 0.49
CACNA1A-228ENST00000636610 NSD3Q9BZ95 1437 aa18.12■□□□□ 0.49
CACNA1A-228ENST00000636610 FRAT2O75474 233 aaPredicted RBP18.12■□□□□ 0.49
CACNA1A-228ENST00000636610 U2AF1L5P0DN76 240 aaPredicted RBP18.12■□□□□ 0.49
CACNA1A-228ENST00000636610 U2AF1Q01081 240 aaKnown RBP eCLIP18.12■□□□□ 0.49
CACNA1A-228ENST00000636610 NKTRP30414 1462 aaKnown RBP18.12■□□□□ 0.49
CACNA1A-228ENST00000636610 TRMT2AQ8IZ69 625 aaKnown RBP18.12■□□□□ 0.49
CACNA1A-228ENST00000636610 ERVK-7P63135 1459 aa18.12■□□□□ 0.49
CACNA1A-228ENST00000636610 SLKQ9H2G2 1235 aaPredicted RBP18.12■□□□□ 0.49
CACNA1A-228ENST00000636610 SPRYD3Q8NCJ5 442 aa18.11■□□□□ 0.49
CACNA1A-228ENST00000636610 BRPF3Q9ULD4 1205 aa18.11■□□□□ 0.49
CACNA1A-228ENST00000636610 LAMC1P11047 1609 aa18.11■□□□□ 0.49
CACNA1A-228ENST00000636610 PIK3C2GO75747 1445 aa18.11■□□□□ 0.49
CACNA1A-228ENST00000636610 ADGRL1O94910 1474 aa18.1■□□□□ 0.49
CACNA1A-228ENST00000636610 U2SURPO15042 1029 aaKnown RBP18.1■□□□□ 0.49
CACNA1A-228ENST00000636610 TRPM2O94759 1503 aa18.1■□□□□ 0.49
CACNA1A-228ENST00000636610 ZFYVE16Q7Z3T8 1539 aa18.1■□□□□ 0.49
CACNA1A-228ENST00000636610 PTPRTO14522 1441 aa18.1■□□□□ 0.49
CACNA1A-228ENST00000636610 RNF17Q9BXT8 1623 aaKnown RBP18.1■□□□□ 0.49
CACNA1A-228ENST00000636610 TSR2Q969E8 191 aaKnown RBP18.09■□□□□ 0.49
CACNA1A-228ENST00000636610 ARXQ96QS3 562 aa18.09■□□□□ 0.49
CACNA1A-228ENST00000636610 RAPGEF3O95398 923 aa18.08■□□□□ 0.48
CACNA1A-228ENST00000636610 PCDHB15Q9Y5E8 787 aa18.07■□□□□ 0.48
CACNA1A-228ENST00000636610 IQGAP1P46940 1657 aa18.07■□□□□ 0.48
CACNA1A-228ENST00000636610 GGNBP2Q9H3C7 697 aa18.07■□□□□ 0.48
CACNA1A-228ENST00000636610 INSRP06213 1382 aa18.06■□□□□ 0.48
CACNA1A-228ENST00000636610 SYNMO15061 1565 aa18.06■□□□□ 0.48
CACNA1A-228ENST00000636610 SHROOM2Q13796 1616 aa18.06■□□□□ 0.48
CACNA1A-228ENST00000636610 RARSP54136 660 aaKnown RBP18.06■□□□□ 0.48
CACNA1A-228ENST00000636610 SPHKAPQ2M3C7 1700 aa18.05■□□□□ 0.48
CACNA1A-228ENST00000636610 ATP7AQ04656 1500 aa18.05■□□□□ 0.48
CACNA1A-228ENST00000636610 FBLN1P23142 703 aa18.05■□□□□ 0.48
CACNA1A-228ENST00000636610 RUNDC1Q96C34 613 aa18.05■□□□□ 0.48
CACNA1A-228ENST00000636610 SRPK2P78362 688 aaKnown RBP18.04■□□□□ 0.48
CACNA1A-228ENST00000636610 GSE1Q14687 1217 aa18.04■□□□□ 0.48
CACNA1A-228ENST00000636610 USP35Q9P2H5 1018 aa18.04■□□□□ 0.48
CACNA1A-228ENST00000636610 RTEL1-TNFRSF6BF6WH68 1400 aa18.03■□□□□ 0.48
CACNA1A-228ENST00000636610 MYOM1P52179 1685 aa18.03■□□□□ 0.48
CACNA1A-228ENST00000636610 STAC3Q96MF2 364 aa18.03■□□□□ 0.48
CACNA1A-228ENST00000636610 CGNL1Q0VF96 1302 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms