RNA–Protein interactions for RNA: ENST00000636410.1

CHD2-224, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-224ENST00000636410 CHGAP10645 457 aaKnown RBP7.8□□□□□ -1.16
CHD2-224ENST00000636410 DIP2AQ14689 1571 aa7.8□□□□□ -1.16
CHD2-224ENST00000636410 NRXN3Q9Y4C0 1643 aa7.79□□□□□ -1.16
CHD2-224ENST00000636410 SETBP1Q9Y6X0 1596 aa7.79□□□□□ -1.16
CHD2-224ENST00000636410 NPHP4O75161 1426 aaPredicted RBP7.78□□□□□ -1.16
CHD2-224ENST00000636410 SETD1AO15047 1707 aaKnown RBP7.78□□□□□ -1.16
CHD2-224ENST00000636410 ANKLE2Q86XL3 938 aa7.78□□□□□ -1.16
CHD2-224ENST00000636410 EID1Q9Y6B2 187 aa7.78□□□□□ -1.16
CHD2-224ENST00000636410 MYOM2P54296 1465 aa7.78□□□□□ -1.16
CHD2-224ENST00000636410 LAMC1P11047 1609 aa7.78□□□□□ -1.16
CHD2-224ENST00000636410 NCKAP5LQ9HCH0 1330 aa7.78□□□□□ -1.16
CHD2-224ENST00000636410 PLEKHG1Q9ULL1 1385 aa7.77□□□□□ -1.17
CHD2-224ENST00000636410 ZNF326Q5BKZ1 582 aaKnown RBP7.77□□□□□ -1.17
CHD2-224ENST00000636410 TXNDC2Q86VQ3 553 aa7.77□□□□□ -1.17
CHD2-224ENST00000636410 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.77□□□□□ -1.17
CHD2-224ENST00000636410 RPGRIP1LQ68CZ1 1315 aa7.77□□□□□ -1.17
CHD2-224ENST00000636410 PPP1R15AO75807 674 aaPredicted RBP7.76□□□□□ -1.17
CHD2-224ENST00000636410 LTKP29376 864 aa7.76□□□□□ -1.17
CHD2-224ENST00000636410 HDGFP51858 240 aaKnown RBP7.76□□□□□ -1.17
CHD2-224ENST00000636410 DMRT2Q9Y5R5 561 aa7.76□□□□□ -1.17
CHD2-224ENST00000636410 NWD1Q149M9 1564 aa7.76□□□□□ -1.17
CHD2-224ENST00000636410 NRXN1Q9ULB1 1477 aa7.75□□□□□ -1.17
CHD2-224ENST00000636410 STRCP1A6NGW2 1772 aa7.75□□□□□ -1.17
CHD2-224ENST00000636410 CHD2O14647 1828 aaKnown RBP7.75□□□□□ -1.17
CHD2-224ENST00000636410 CLSPNQ9HAW4 1339 aa7.75□□□□□ -1.17
CHD2-224ENST00000636410 PIK3C2GO75747 1445 aa7.74□□□□□ -1.17
CHD2-224ENST00000636410 ADAMTS13Q76LX8 1427 aa7.74□□□□□ -1.17
CHD2-224ENST00000636410 KIAA1210Q9ULL0 1709 aa7.74□□□□□ -1.17
CHD2-224ENST00000636410 ALKQ9UM73 1620 aa7.74□□□□□ -1.17
CHD2-224ENST00000636410 XRN1Q8IZH2 1706 aaKnown RBP7.73□□□□□ -1.17
CHD2-224ENST00000636410 VGFO15240 615 aaPredicted RBP7.73□□□□□ -1.17
CHD2-224ENST00000636410 RGL3Q3MIN7 710 aa7.73□□□□□ -1.17
CHD2-224ENST00000636410 NUTM2DQ5VT03 806 aaPredicted RBP7.73□□□□□ -1.17
CHD2-224ENST00000636410 KNDC1Q76NI1 1749 aa7.72□□□□□ -1.17
CHD2-224ENST00000636410 TRPM1Q7Z4N2 1603 aa7.72□□□□□ -1.17
CHD2-224ENST00000636410 LTBP4Q8N2S1 1624 aa7.72□□□□□ -1.17
CHD2-224ENST00000636410 SIN3AQ96ST3 1273 aa7.72□□□□□ -1.17
CHD2-224ENST00000636410 CPS1P31327 1500 aa7.72□□□□□ -1.17
CHD2-224ENST00000636410 ASXL1Q8IXJ9 1541 aa7.72□□□□□ -1.17
CHD2-224ENST00000636410 NKTRP30414 1462 aaKnown RBP7.71□□□□□ -1.18
CHD2-224ENST00000636410 NEUROD1Q13562 356 aa7.71□□□□□ -1.18
CHD2-224ENST00000636410 CCER1Q8TC90 406 aaPredicted RBP7.71□□□□□ -1.18
CHD2-224ENST00000636410 STAC3Q96MF2 364 aa7.71□□□□□ -1.18
CHD2-224ENST00000636410 ADGRF5Q8IZF2 1346 aa7.71□□□□□ -1.18
CHD2-224ENST00000636410 XIRP1Q702N8 1843 aaKnown RBP7.71□□□□□ -1.18
CHD2-224ENST00000636410 TONSLQ96HA7 1378 aa7.71□□□□□ -1.18
CHD2-224ENST00000636410 PIK3R4Q99570 1358 aa7.71□□□□□ -1.18
CHD2-224ENST00000636410 DCAF11Q8TEB1 546 aa7.7□□□□□ -1.18
CHD2-224ENST00000636410 BCANQ96GW7 911 aa7.7□□□□□ -1.18
CHD2-224ENST00000636410 SLC26A8Q96RN1 970 aa7.7□□□□□ -1.18
CHD2-224ENST00000636410 PRAG1Q86YV5 1406 aa7.69□□□□□ -1.18
CHD2-224ENST00000636410 ADGRB1O14514 1584 aa7.69□□□□□ -1.18
CHD2-224ENST00000636410 SENP3Q9H4L4 574 aaPredicted RBP7.69□□□□□ -1.18
CHD2-224ENST00000636410 TBX22Q9Y458 520 aa7.69□□□□□ -1.18
CHD2-224ENST00000636410 ZNF335Q9H4Z2 1342 aaPredicted RBP7.69□□□□□ -1.18
CHD2-224ENST00000636410 L3MBTL2Q969R5 705 aa7.68□□□□□ -1.18
CHD2-224ENST00000636410 ARHGEF28Q8N1W1 1705 aaKnown RBP7.68□□□□□ -1.18
CHD2-224ENST00000636410 METP08581 1390 aa7.68□□□□□ -1.18
CHD2-224ENST00000636410 PTPRUQ92729 1446 aa7.68□□□□□ -1.18
CHD2-224ENST00000636410 IQSEC2Q5JU85 1478 aa7.68□□□□□ -1.18
CHD2-224ENST00000636410 KDM2AQ9Y2K7 1162 aa7.67□□□□□ -1.18
CHD2-224ENST00000636410 PTCH1Q13635 1447 aa7.67□□□□□ -1.18
CHD2-224ENST00000636410 LRRC7Q96NW7 1537 aa7.67□□□□□ -1.18
CHD2-224ENST00000636410 NALCNQ8IZF0 1738 aa7.66□□□□□ -1.18
CHD2-224ENST00000636410 KCNA6P17658 529 aa7.66□□□□□ -1.18
CHD2-224ENST00000636410 C14orf93Q9H972 538 aaKnown RBP7.66□□□□□ -1.18
CHD2-224ENST00000636410 TECPR2O15040 1411 aa7.66□□□□□ -1.18
CHD2-224ENST00000636410 YTHDC2Q9H6S0 1430 aaKnown RBP7.66□□□□□ -1.18
CHD2-224ENST00000636410 RALGAPBQ86X10 1494 aa7.66□□□□□ -1.18
CHD2-224ENST00000636410 DLC1Q96QB1 1528 aa7.66□□□□□ -1.18
CHD2-224ENST00000636410 LRPPRCP42704 1394 aaKnown RBP7.65□□□□□ -1.18
CHD2-224ENST00000636410 CFAP70Q5T0N1 1121 aa7.65□□□□□ -1.18
CHD2-224ENST00000636410 TIMELESSQ9UNS1 1208 aa7.65□□□□□ -1.18
CHD2-224ENST00000636410 AMOTL2Q9Y2J4 779 aa7.64□□□□□ -1.19
CHD2-224ENST00000636410 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.64□□□□□ -1.19
CHD2-224ENST00000636410 QRICH2Q9H0J4 1663 aa7.63□□□□□ -1.19
CHD2-224ENST00000636410 NCOA3Q9Y6Q9 1424 aa7.63□□□□□ -1.19
CHD2-224ENST00000636410 ABCC11Q96J66 1382 aa7.63□□□□□ -1.19
CHD2-224ENST00000636410 ADGRB2O60241 1585 aa7.63□□□□□ -1.19
CHD2-224ENST00000636410 CDC42BPGQ6DT37 1551 aa7.63□□□□□ -1.19
CHD2-224ENST00000636410 FAM135BQ49AJ0 1406 aa7.62□□□□□ -1.19
CHD2-224ENST00000636410 ROCK2O75116 1388 aaKnown RBP7.62□□□□□ -1.19
CHD2-224ENST00000636410 TMEM94Q12767 1356 aa7.62□□□□□ -1.19
CHD2-224ENST00000636410 GPRASP1Q5JY77 1395 aa7.62□□□□□ -1.19
CHD2-224ENST00000636410 ROBO2Q9HCK4 1378 aa7.62□□□□□ -1.19
CHD2-224ENST00000636410 TMEM132EQ6IEE7 984 aa7.62□□□□□ -1.19
CHD2-224ENST00000636410 CERKQ8TCT0 537 aa7.62□□□□□ -1.19
CHD2-224ENST00000636410 ADGRL3Q9HAR2 1447 aa7.61□□□□□ -1.19
CHD2-224ENST00000636410 NBPF8Q3BBV2 869 aa7.61□□□□□ -1.19
CHD2-224ENST00000636410 PROSER2Q86WR7 435 aaPredicted RBP7.61□□□□□ -1.19
CHD2-224ENST00000636410 FMN2Q9NZ56 1722 aa7.61□□□□□ -1.19
CHD2-224ENST00000636410 DCCP43146 1447 aa7.61□□□□□ -1.19
CHD2-224ENST00000636410 NBPF1Q3BBV0 1214 aa7.6□□□□□ -1.19
CHD2-224ENST00000636410 STK26Q9P289 416 aa7.6□□□□□ -1.19
CHD2-224ENST00000636410 MSH6P52701 1360 aa7.59□□□□□ -1.19
CHD2-224ENST00000636410 SIRT1Q96EB6 747 aa7.59□□□□□ -1.19
CHD2-224ENST00000636410 EIF3AQ14152 1382 aaKnown RBP7.59□□□□□ -1.2
CHD2-224ENST00000636410 PLEKHH1Q9ULM0 1364 aa7.59□□□□□ -1.2
CHD2-224ENST00000636410 RBM33Q96EV2 1170 aaKnown RBP7.58□□□□□ -1.2
CHD2-224ENST00000636410 TRAK1Q9UPV9 953 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms