RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 FAM135BQ49AJ0 1406 aa27.98■■■□□ 2.07
CLN6-214ENST00000636314 MYO5BQ9ULV0 1848 aa27.97■■■□□ 2.07
CLN6-214ENST00000636314 RPRD2Q5VT52 1461 aaKnown RBP27.97■■■□□ 2.07
CLN6-214ENST00000636314 NOS1P29475 1434 aa27.97■■■□□ 2.07
CLN6-214ENST00000636314 PROSER2Q86WR7 435 aaPredicted RBP27.96■■■□□ 2.07
CLN6-214ENST00000636314 RBM33Q96EV2 1170 aaKnown RBP27.95■■■□□ 2.06
CLN6-214ENST00000636314 BCANQ96GW7 911 aa27.95■■■□□ 2.06
CLN6-214ENST00000636314 IQGAP3Q86VI3 1631 aa27.95■■■□□ 2.06
CLN6-214ENST00000636314 RGS17Q9UGC6 210 aaPredicted RBP27.94■■■□□ 2.06
CLN6-214ENST00000636314 NWD1Q149M9 1564 aa27.94■■■□□ 2.06
CLN6-214ENST00000636314 NKTRP30414 1462 aaKnown RBP27.91■■■□□ 2.06
CLN6-214ENST00000636314 SLC52A1Q9NWF4 448 aa27.9■■■□□ 2.06
CLN6-214ENST00000636314 E9PCH4 1651 aa27.89■■■□□ 2.06
CLN6-214ENST00000636314 CHD2O14647 1828 aaKnown RBP27.87■■■□□ 2.05
CLN6-214ENST00000636314 NUP155O75694 1391 aa27.86■■■□□ 2.05
CLN6-214ENST00000636314 MSH6P52701 1360 aa27.86■■■□□ 2.05
CLN6-214ENST00000636314 PHLPP1O60346 1717 aa27.85■■■□□ 2.05
CLN6-214ENST00000636314 PPP1R15AO75807 674 aaPredicted RBP27.82■■■□□ 2.04
CLN6-214ENST00000636314 ZFYVE9O95405 1425 aa27.82■■■□□ 2.04
CLN6-214ENST00000636314 TMEM131LA2VDJ0 1609 aa27.81■■■□□ 2.04
CLN6-214ENST00000636314 NAIPQ13075 1403 aa27.81■■■□□ 2.04
CLN6-214ENST00000636314 RIMS2Q9UQ26 1411 aa27.81■■■□□ 2.04
CLN6-214ENST00000636314 PLEKHG1Q9ULL1 1385 aa27.8■■■□□ 2.04
CLN6-214ENST00000636314 POTEAQ6S8J7 498 aa27.79■■■□□ 2.04
CLN6-214ENST00000636314 HDGFP51858 240 aaKnown RBP27.77■■■□□ 2.04
CLN6-214ENST00000636314 SLAIN2Q9P270 581 aa27.77■■■□□ 2.04
CLN6-214ENST00000636314 CHGAP10645 457 aaKnown RBP27.76■■■□□ 2.03
CLN6-214ENST00000636314 HFM1A2PYH4 1435 aa27.75■■■□□ 2.03
CLN6-214ENST00000636314 SPHKAPQ2M3C7 1700 aa27.72■■■□□ 2.03
CLN6-214ENST00000636314 JCADQ9P266 1359 aa27.71■■■□□ 2.03
CLN6-214ENST00000636314 SETD1AO15047 1707 aaKnown RBP27.7■■■□□ 2.03
CLN6-214ENST00000636314 C14orf37Q86TY3 774 aa27.7■■■□□ 2.02
CLN6-214ENST00000636314 NUTM2DQ5VT03 806 aaPredicted RBP27.69■■■□□ 2.02
CLN6-214ENST00000636314 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.69■■■□□ 2.02
CLN6-214ENST00000636314 TBX22Q9Y458 520 aa27.69■■■□□ 2.02
CLN6-214ENST00000636314 COL16A1Q07092 1604 aaPredicted RBP27.69■■■□□ 2.02
CLN6-214ENST00000636314 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.68■■■□□ 2.02
CLN6-214ENST00000636314 DIP2AQ14689 1571 aa27.68■■■□□ 2.02
CLN6-214ENST00000636314 ADAMTS13Q76LX8 1427 aa27.65■■■□□ 2.02
CLN6-214ENST00000636314 NCOA3Q9Y6Q9 1424 aa27.65■■■□□ 2.02
CLN6-214ENST00000636314 TRIM52Q96A61 297 aa27.6■■■□□ 2.01
CLN6-214ENST00000636314 TRPM2O94759 1503 aa27.6■■■□□ 2.01
CLN6-214ENST00000636314 ATF3P18847 181 aa27.59■■■□□ 2.01
CLN6-214ENST00000636314 CADPS2Q86UW7 1296 aa27.59■■■□□ 2.01
CLN6-214ENST00000636314 PIK3R4Q99570 1358 aa27.59■■■□□ 2.01
CLN6-214ENST00000636314 AHDC1Q5TGY3 1603 aaPredicted RBP27.58■■■□□ 2.01
CLN6-214ENST00000636314 SHPRHQ149N8 1683 aa27.58■■■□□ 2.01
CLN6-214ENST00000636314 LRP6O75581 1613 aa27.57■■■□□ 2
CLN6-214ENST00000636314 MEX3CQ5U5Q3 659 aaKnown RBP27.57■■■□□ 2
CLN6-214ENST00000636314 C19orf44Q9H6X5 657 aa27.56■■■□□ 2
CLN6-214ENST00000636314 CLTCL1P53675 1640 aa27.56■■■□□ 2
CLN6-214ENST00000636314 SPATA31A6Q5VVP1 1343 aa27.55■■■□□ 2
CLN6-214ENST00000636314 AMOTL2Q9Y2J4 779 aa27.53■■■□□ 2
CLN6-214ENST00000636314 PTPRUQ92729 1446 aa27.52■■■□□ 2
CLN6-214ENST00000636314 KIF1BO60333 1816 aa27.51■■□□□ 1.99
CLN6-214ENST00000636314 SLC4A1APQ9BWU0 796 aaKnown RBP27.5■■□□□ 1.99
CLN6-214ENST00000636314 NRXN3Q9Y4C0 1643 aa27.49■■□□□ 1.99
CLN6-214ENST00000636314 XRN1Q8IZH2 1706 aaKnown RBP27.49■■□□□ 1.99
CLN6-214ENST00000636314 ZNF772Q68DY9 489 aaPredicted RBP27.47■■□□□ 1.99
CLN6-214ENST00000636314 BRINP3Q76B58 766 aa27.46■■□□□ 1.99
CLN6-214ENST00000636314 SETBP1Q9Y6X0 1596 aa27.46■■□□□ 1.99
CLN6-214ENST00000636314 ZNF326Q5BKZ1 582 aaKnown RBP27.45■■□□□ 1.98
CLN6-214ENST00000636314 DCCP43146 1447 aa27.43■■□□□ 1.98
CLN6-214ENST00000636314 ASXL1Q8IXJ9 1541 aa27.43■■□□□ 1.98
CLN6-214ENST00000636314 NUTM2BA6NNL0 878 aaPredicted RBP27.43■■□□□ 1.98
CLN6-214ENST00000636314 NUTM2EB1AL46 878 aaPredicted RBP27.43■■□□□ 1.98
CLN6-214ENST00000636314 NUTM2AQ8IVF1 878 aaPredicted RBP27.43■■□□□ 1.98
CLN6-214ENST00000636314 NHSL1Q5SYE7 1610 aa27.42■■□□□ 1.98
CLN6-214ENST00000636314 NEXMIFQ5QGS0 1516 aa27.41■■□□□ 1.98
CLN6-214ENST00000636314 SETD5Q9C0A6 1442 aa27.4■■□□□ 1.98
CLN6-214ENST00000636314 MST1RQ04912 1400 aa27.38■■□□□ 1.97
CLN6-214ENST00000636314 METP08581 1390 aa27.36■■□□□ 1.97
CLN6-214ENST00000636314 NALCNQ8IZF0 1738 aa27.36■■□□□ 1.97
CLN6-214ENST00000636314 ACIN1Q9UKV3 1341 aaKnown RBP27.36■■□□□ 1.97
CLN6-214ENST00000636314 RXRBP28702 533 aa27.35■■□□□ 1.97
CLN6-214ENST00000636314 FOXD1Q16676 465 aa27.35■■□□□ 1.97
CLN6-214ENST00000636314 UPF1Q92900 1129 aaKnown RBP eCLIP27.34■■□□□ 1.97
CLN6-214ENST00000636314 MPHOSPH9Q99550 1183 aa27.34■■□□□ 1.97
CLN6-214ENST00000636314 AFF2P51816 1311 aa27.32■■□□□ 1.96
CLN6-214ENST00000636314 CCDC144AA2RUR9 1427 aa27.32■■□□□ 1.96
CLN6-214ENST00000636314 ADGRL3Q9HAR2 1447 aa27.32■■□□□ 1.96
CLN6-214ENST00000636314 RAB3GAP2Q9H2M9 1393 aa27.31■■□□□ 1.96
CLN6-214ENST00000636314 LRRC59Q96AG4 307 aaKnown RBP27.29■■□□□ 1.96
CLN6-214ENST00000636314 PPLO60437 1756 aa27.29■■□□□ 1.96
CLN6-214ENST00000636314 DDX17Q92841 729 aaKnown RBP27.28■■□□□ 1.96
CLN6-214ENST00000636314 CDK12Q9NYV4 1490 aaPredicted RBP27.26■■□□□ 1.95
CLN6-214ENST00000636314 C8orf37Q96NL8 207 aa27.25■■□□□ 1.95
CLN6-214ENST00000636314 RPGRIP1LQ68CZ1 1315 aa27.24■■□□□ 1.95
CLN6-214ENST00000636314 PNPLA6Q8IY17 1366 aa27.23■■□□□ 1.95
CLN6-214ENST00000636314 VGFO15240 615 aaPredicted RBP27.22■■□□□ 1.95
CLN6-214ENST00000636314 C1orf167Q5SNV9 1468 aa27.19■■□□□ 1.94
CLN6-214ENST00000636314 IFT172Q9UG01 1749 aa27.19■■□□□ 1.94
CLN6-214ENST00000636314 SPATA31E1Q6ZUB1 1445 aa27.18■■□□□ 1.94
CLN6-214ENST00000636314 QTRT2Q9H974 415 aaKnown RBP27.18■■□□□ 1.94
CLN6-214ENST00000636314 RGS12O14924 1447 aa27.16■■□□□ 1.94
CLN6-214ENST00000636314 PTCH1Q13635 1447 aa27.16■■□□□ 1.94
CLN6-214ENST00000636314 LAMC1P11047 1609 aa27.16■■□□□ 1.94
CLN6-214ENST00000636314 ADAMTS2O95450 1211 aa27.15■■□□□ 1.94
CLN6-214ENST00000636314 RBM6P78332 1123 aaKnown RBP27.15■■□□□ 1.94
CLN6-214ENST00000636314 ROBO2Q9HCK4 1378 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms