RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 CCDC144AA2RUR9 1427 aa22.09■■□□□ 1.13
CLN8-209ENST00000635970 ARHGAP23Q9P227 1491 aa22.09■■□□□ 1.13
CLN8-209ENST00000635970 NCKAP5LQ9HCH0 1330 aa22.08■■□□□ 1.13
CLN8-209ENST00000635970 ANKRD30BQ9BXX2 1392 aa22.07■■□□□ 1.12
CLN8-209ENST00000635970 TMEM2Q9UHN6 1383 aa22.07■■□□□ 1.12
CLN8-209ENST00000635970 DHX57Q6P158 1386 aaKnown RBP22.06■■□□□ 1.12
CLN8-209ENST00000635970 SCAF11Q99590 1463 aaKnown RBP22.03■■□□□ 1.12
CLN8-209ENST00000635970 ZFYVE9O95405 1425 aa22.03■■□□□ 1.12
CLN8-209ENST00000635970 IQGAP1P46940 1657 aa22.02■■□□□ 1.12
CLN8-209ENST00000635970 LTKP29376 864 aa22.02■■□□□ 1.12
CLN8-209ENST00000635970 ANKLE2Q86XL3 938 aa22.01■■□□□ 1.11
CLN8-209ENST00000635970 RIMS2Q9UQ26 1411 aa22.01■■□□□ 1.11
CLN8-209ENST00000635970 NEXMIFQ5QGS0 1516 aa22.01■■□□□ 1.11
CLN8-209ENST00000635970 NUTM2DQ5VT03 806 aaPredicted RBP21.99■■□□□ 1.11
CLN8-209ENST00000635970 TXNDC2Q86VQ3 553 aa21.99■■□□□ 1.11
CLN8-209ENST00000635970 SPATA31E1Q6ZUB1 1445 aa21.99■■□□□ 1.11
CLN8-209ENST00000635970 PPLO60437 1756 aa21.99■■□□□ 1.11
CLN8-209ENST00000635970 ZNF326Q5BKZ1 582 aaKnown RBP21.99■■□□□ 1.11
CLN8-209ENST00000635970 MED14O60244 1454 aa21.98■■□□□ 1.11
CLN8-209ENST00000635970 IFT172Q9UG01 1749 aa21.98■■□□□ 1.11
CLN8-209ENST00000635970 NPHP4O75161 1426 aaPredicted RBP21.97■■□□□ 1.11
CLN8-209ENST00000635970 SENP3Q9H4L4 574 aaPredicted RBP21.97■■□□□ 1.11
CLN8-209ENST00000635970 EID1Q9Y6B2 187 aa21.96■■□□□ 1.11
CLN8-209ENST00000635970 RGL3Q3MIN7 710 aa21.94■■□□□ 1.1
CLN8-209ENST00000635970 PPP1R15AO75807 674 aaPredicted RBP21.92■■□□□ 1.1
CLN8-209ENST00000635970 DMRT2Q9Y5R5 561 aa21.92■■□□□ 1.1
CLN8-209ENST00000635970 NRXN3Q9Y4C0 1643 aa21.9■■□□□ 1.1
CLN8-209ENST00000635970 PLEKHG1Q9ULL1 1385 aa21.89■■□□□ 1.09
CLN8-209ENST00000635970 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.88■■□□□ 1.09
CLN8-209ENST00000635970 SIN3AQ96ST3 1273 aa21.88■■□□□ 1.09
CLN8-209ENST00000635970 HDGFP51858 240 aaKnown RBP21.87■■□□□ 1.09
CLN8-209ENST00000635970 BCANQ96GW7 911 aa21.85■■□□□ 1.09
CLN8-209ENST00000635970 SLC26A8Q96RN1 970 aa21.85■■□□□ 1.09
CLN8-209ENST00000635970 SETBP1Q9Y6X0 1596 aa21.85■■□□□ 1.09
CLN8-209ENST00000635970 RPGRIP1LQ68CZ1 1315 aa21.85■■□□□ 1.09
CLN8-209ENST00000635970 STRCP1A6NGW2 1772 aa21.85■■□□□ 1.09
CLN8-209ENST00000635970 ADAMTS13Q76LX8 1427 aa21.83■■□□□ 1.09
CLN8-209ENST00000635970 ZNF335Q9H4Z2 1342 aaPredicted RBP21.83■■□□□ 1.09
CLN8-209ENST00000635970 SETD1AO15047 1707 aaKnown RBP21.82■■□□□ 1.08
CLN8-209ENST00000635970 ADGRF5Q8IZF2 1346 aa21.81■■□□□ 1.08
CLN8-209ENST00000635970 DIP2AQ14689 1571 aa21.81■■□□□ 1.08
CLN8-209ENST00000635970 MYOM2P54296 1465 aa21.8■■□□□ 1.08
CLN8-209ENST00000635970 VGFO15240 615 aaPredicted RBP21.8■■□□□ 1.08
CLN8-209ENST00000635970 LTBP4Q8N2S1 1624 aa21.79■■□□□ 1.08
CLN8-209ENST00000635970 SUPT16HQ9Y5B9 1047 aaKnown RBP21.78■■□□□ 1.08
CLN8-209ENST00000635970 CHD2O14647 1828 aaKnown RBP21.78■■□□□ 1.08
CLN8-209ENST00000635970 ALKQ9UM73 1620 aa21.77■■□□□ 1.08
CLN8-209ENST00000635970 DCAF11Q8TEB1 546 aa21.77■■□□□ 1.08
CLN8-209ENST00000635970 PIK3C2GO75747 1445 aa21.76■■□□□ 1.07
CLN8-209ENST00000635970 NRXN1Q9ULB1 1477 aa21.76■■□□□ 1.07
CLN8-209ENST00000635970 KDM2AQ9Y2K7 1162 aa21.76■■□□□ 1.07
CLN8-209ENST00000635970 NWD1Q149M9 1564 aa21.74■■□□□ 1.07
CLN8-209ENST00000635970 TBX22Q9Y458 520 aa21.73■■□□□ 1.07
CLN8-209ENST00000635970 METP08581 1390 aa21.72■■□□□ 1.07
CLN8-209ENST00000635970 L3MBTL2Q969R5 705 aa21.71■■□□□ 1.07
CLN8-209ENST00000635970 LAMC1P11047 1609 aa21.71■■□□□ 1.07
CLN8-209ENST00000635970 ASXL1Q8IXJ9 1541 aa21.71■■□□□ 1.07
CLN8-209ENST00000635970 PTPRUQ92729 1446 aa21.71■■□□□ 1.07
CLN8-209ENST00000635970 XRN1Q8IZH2 1706 aaKnown RBP21.7■■□□□ 1.06
CLN8-209ENST00000635970 CPS1P31327 1500 aa21.69■■□□□ 1.06
CLN8-209ENST00000635970 XIRP1Q702N8 1843 aaKnown RBP21.68■■□□□ 1.06
CLN8-209ENST00000635970 TONSLQ96HA7 1378 aa21.67■■□□□ 1.06
CLN8-209ENST00000635970 KCNA6P17658 529 aa21.66■■□□□ 1.06
CLN8-209ENST00000635970 CFAP70Q5T0N1 1121 aa21.66■■□□□ 1.06
CLN8-209ENST00000635970 TIMELESSQ9UNS1 1208 aa21.66■■□□□ 1.06
CLN8-209ENST00000635970 PIK3R4Q99570 1358 aa21.66■■□□□ 1.06
CLN8-209ENST00000635970 PRAG1Q86YV5 1406 aa21.65■■□□□ 1.06
CLN8-209ENST00000635970 LRRC7Q96NW7 1537 aa21.65■■□□□ 1.06
CLN8-209ENST00000635970 NKTRP30414 1462 aaKnown RBP21.65■■□□□ 1.06
CLN8-209ENST00000635970 TMEM132EQ6IEE7 984 aa21.63■■□□□ 1.05
CLN8-209ENST00000635970 C14orf93Q9H972 538 aaKnown RBP21.63■■□□□ 1.05
CLN8-209ENST00000635970 AMOTL2Q9Y2J4 779 aa21.63■■□□□ 1.05
CLN8-209ENST00000635970 RBM33Q96EV2 1170 aaKnown RBP21.62■■□□□ 1.05
CLN8-209ENST00000635970 STAC3Q96MF2 364 aa21.62■■□□□ 1.05
CLN8-209ENST00000635970 KIAA1210Q9ULL0 1709 aa21.62■■□□□ 1.05
CLN8-209ENST00000635970 ADGRB1O14514 1584 aa21.61■■□□□ 1.05
CLN8-209ENST00000635970 CERKQ8TCT0 537 aa21.61■■□□□ 1.05
CLN8-209ENST00000635970 KNDC1Q76NI1 1749 aa21.61■■□□□ 1.05
CLN8-209ENST00000635970 TRPM1Q7Z4N2 1603 aa21.6■■□□□ 1.05
CLN8-209ENST00000635970 TMEM94Q12767 1356 aa21.57■■□□□ 1.04
CLN8-209ENST00000635970 YTHDC2Q9H6S0 1430 aaKnown RBP21.57■■□□□ 1.04
CLN8-209ENST00000635970 PROSER2Q86WR7 435 aaPredicted RBP21.56■■□□□ 1.04
CLN8-209ENST00000635970 STK26Q9P289 416 aa21.56■■□□□ 1.04
CLN8-209ENST00000635970 PTCH1Q13635 1447 aa21.55■■□□□ 1.04
CLN8-209ENST00000635970 ROBO2Q9HCK4 1378 aa21.55■■□□□ 1.04
CLN8-209ENST00000635970 NBPF8Q3BBV2 869 aa21.55■■□□□ 1.04
CLN8-209ENST00000635970 LRPPRCP42704 1394 aaKnown RBP21.54■■□□□ 1.04
CLN8-209ENST00000635970 NALCNQ8IZF0 1738 aa21.54■■□□□ 1.04
CLN8-209ENST00000635970 IQSEC2Q5JU85 1478 aa21.53■■□□□ 1.04
CLN8-209ENST00000635970 NBPF1Q3BBV0 1214 aa21.53■■□□□ 1.04
CLN8-209ENST00000635970 TECPR2O15040 1411 aa21.53■■□□□ 1.04
CLN8-209ENST00000635970 ARHGEF28Q8N1W1 1705 aaKnown RBP21.52■■□□□ 1.04
CLN8-209ENST00000635970 TSHZ2Q9NRE2 1034 aa21.51■■□□□ 1.03
CLN8-209ENST00000635970 ABCC11Q96J66 1382 aa21.5■■□□□ 1.03
CLN8-209ENST00000635970 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.5■■□□□ 1.03
CLN8-209ENST00000635970 PLEKHH1Q9ULM0 1364 aa21.48■■□□□ 1.03
CLN8-209ENST00000635970 TRAK1Q9UPV9 953 aa21.47■■□□□ 1.03
CLN8-209ENST00000635970 DLC1Q96QB1 1528 aa21.47■■□□□ 1.03
CLN8-209ENST00000635970 RALGAPBQ86X10 1494 aa21.47■■□□□ 1.03
CLN8-209ENST00000635970 WAPLQ7Z5K2 1190 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms