RNA–Protein interactions for RNA: ENST00000635885.1

SYNGAP1-209, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 191 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-209ENST00000635885 PARD3Q8TEW0 1356 aa14.07□□□□□ -0.16
SYNGAP1-209ENST00000635885 PER1O15534 1290 aaPredicted RBP14.06□□□□□ -0.16
SYNGAP1-209ENST00000635885 TMC1Q8TDI8 760 aa14.06□□□□□ -0.16
SYNGAP1-209ENST00000635885 LRPPRCP42704 1394 aaKnown RBP14.06□□□□□ -0.16
SYNGAP1-209ENST00000635885 CAMSAP1Q5T5Y3 1602 aa14.05□□□□□ -0.16
SYNGAP1-209ENST00000635885 WASHC2CQ9Y4E1 1318 aa14.05□□□□□ -0.16
SYNGAP1-209ENST00000635885 DIP2CQ9Y2E4 1556 aa14.05□□□□□ -0.16
SYNGAP1-209ENST00000635885 SMG6Q86US8 1419 aaKnown RBP14.04□□□□□ -0.16
SYNGAP1-209ENST00000635885 ABCC3O15438 1527 aa14.04□□□□□ -0.16
SYNGAP1-209ENST00000635885 ADGRB3O60242 1522 aa14.04□□□□□ -0.16
SYNGAP1-209ENST00000635885 KDM5AP29375 1690 aaKnown RBP14.04□□□□□ -0.16
SYNGAP1-209ENST00000635885 ERICH6BQ5W0A0 696 aa14.03□□□□□ -0.16
SYNGAP1-209ENST00000635885 PANK3Q9H999 370 aa14.03□□□□□ -0.16
SYNGAP1-209ENST00000635885 MYOM1P52179 1685 aa14.03□□□□□ -0.16
SYNGAP1-209ENST00000635885 SIGLEC1Q9BZZ2 1709 aa14.02□□□□□ -0.16
SYNGAP1-209ENST00000635885 SYNMO15061 1565 aa14.02□□□□□ -0.16
SYNGAP1-209ENST00000635885 NRXN1Q9ULB1 1477 aa14.02□□□□□ -0.16
SYNGAP1-209ENST00000635885 TSHZ2Q9NRE2 1034 aa14.02□□□□□ -0.17
SYNGAP1-209ENST00000635885 MYO3AQ8NEV4 1616 aa14.01□□□□□ -0.17
SYNGAP1-209ENST00000635885 RAPGEF3O95398 923 aa14.01□□□□□ -0.17
SYNGAP1-209ENST00000635885 NPATQ14207 1427 aa14□□□□□ -0.17
SYNGAP1-209ENST00000635885 ADGRF5Q8IZF2 1346 aa14□□□□□ -0.17
SYNGAP1-209ENST00000635885 NLRP13Q86W25 1043 aa14□□□□□ -0.17
SYNGAP1-209ENST00000635885 ZC3H13Q5T200 1668 aaKnown RBP14□□□□□ -0.17
SYNGAP1-209ENST00000635885 EIF3AQ14152 1382 aaKnown RBP13.99□□□□□ -0.17
SYNGAP1-209ENST00000635885 IRX6P78412 446 aaPredicted RBP13.99□□□□□ -0.17
SYNGAP1-209ENST00000635885 CDCA8Q53HL2 280 aa13.99□□□□□ -0.17
SYNGAP1-209ENST00000635885 SETBP1Q9Y6X0 1596 aa13.99□□□□□ -0.17
SYNGAP1-209ENST00000635885 PIK3C2BO00750 1634 aa13.98□□□□□ -0.17
SYNGAP1-209ENST00000635885 CFAP70Q5T0N1 1121 aa13.98□□□□□ -0.17
SYNGAP1-209ENST00000635885 GGT6Q6P531 493 aa13.98□□□□□ -0.17
SYNGAP1-209ENST00000635885 NUDCQ9Y266 331 aa13.98□□□□□ -0.17
SYNGAP1-209ENST00000635885 ZMYM4Q5VZL5 1548 aa13.98□□□□□ -0.17
SYNGAP1-209ENST00000635885 NOS1P29475 1434 aa13.98□□□□□ -0.17
SYNGAP1-209ENST00000635885 TSPOAP1O95153 1857 aa13.96□□□□□ -0.17
SYNGAP1-209ENST00000635885 CC2D1BQ5T0F9 858 aaKnown RBP13.96□□□□□ -0.17
SYNGAP1-209ENST00000635885 MYO5BQ9ULV0 1848 aa13.96□□□□□ -0.17
SYNGAP1-209ENST00000635885 INSRP06213 1382 aa13.96□□□□□ -0.18
SYNGAP1-209ENST00000635885 PPP4R2Q9NY27 417 aa13.95□□□□□ -0.18
SYNGAP1-209ENST00000635885 RPGRIP1LQ68CZ1 1315 aa13.94□□□□□ -0.18
SYNGAP1-209ENST00000635885 CHGAP10645 457 aaKnown RBP13.94□□□□□ -0.18
SYNGAP1-209ENST00000635885 QRICH2Q9H0J4 1663 aa13.94□□□□□ -0.18
SYNGAP1-209ENST00000635885 ASXL1Q8IXJ9 1541 aa13.94□□□□□ -0.18
SYNGAP1-209ENST00000635885 ERVK-7P63135 1459 aa13.93□□□□□ -0.18
SYNGAP1-209ENST00000635885 SLC24A1O60721 1099 aa13.93□□□□□ -0.18
SYNGAP1-209ENST00000635885 KIF13AQ9H1H9 1805 aa13.92□□□□□ -0.18
SYNGAP1-209ENST00000635885 PREX1Q8TCU6 1659 aa13.92□□□□□ -0.18
SYNGAP1-209ENST00000635885 ARHGAP31Q2M1Z3 1444 aa13.92□□□□□ -0.18
SYNGAP1-209ENST00000635885 TRHP20396 242 aaPredicted RBP13.92□□□□□ -0.18
SYNGAP1-209ENST00000635885 RNF123Q5XPI4 1314 aa13.91□□□□□ -0.18
SYNGAP1-209ENST00000635885 PIK3C2GO75747 1445 aa13.91□□□□□ -0.18
SYNGAP1-209ENST00000635885 BLMP54132 1417 aaPredicted RBP13.91□□□□□ -0.18
SYNGAP1-209ENST00000635885 YEATS2Q9ULM3 1422 aa13.91□□□□□ -0.18
SYNGAP1-209ENST00000635885 PPP6R1Q9UPN7 881 aa13.91□□□□□ -0.18
SYNGAP1-209ENST00000635885 KNSTRNQ9Y448 316 aa13.91□□□□□ -0.18
SYNGAP1-209ENST00000635885 NEXMIFQ5QGS0 1516 aa13.9□□□□□ -0.18
SYNGAP1-209ENST00000635885 AMER1Q5JTC6 1135 aaPredicted RBP13.9□□□□□ -0.18
SYNGAP1-209ENST00000635885 C14orf93Q9H972 538 aaKnown RBP13.9□□□□□ -0.18
SYNGAP1-209ENST00000635885 NPC1L1Q9UHC9 1359 aa13.9□□□□□ -0.18
SYNGAP1-209ENST00000635885 ADGRB1O14514 1584 aa13.9□□□□□ -0.18
SYNGAP1-209ENST00000635885 REREQ9P2R6 1566 aa13.89□□□□□ -0.19
SYNGAP1-209ENST00000635885 SBNO2Q9Y2G9 1366 aa13.89□□□□□ -0.19
SYNGAP1-209ENST00000635885 SENP3-EIF4A1A0A087X0R7 540 aa13.89□□□□□ -0.19
SYNGAP1-209ENST00000635885 ARHGEF28Q8N1W1 1705 aaKnown RBP13.88□□□□□ -0.19
SYNGAP1-209ENST00000635885 PPP2R1AP30153 589 aa13.88□□□□□ -0.19
SYNGAP1-209ENST00000635885 AGLP35573 1532 aa13.87□□□□□ -0.19
SYNGAP1-209ENST00000635885 PDE3BQ13370 1112 aa13.87□□□□□ -0.19
SYNGAP1-209ENST00000635885 CENPJQ9HC77 1338 aaPredicted RBP13.87□□□□□ -0.19
SYNGAP1-209ENST00000635885 TMEM131LA2VDJ0 1609 aa13.86□□□□□ -0.19
SYNGAP1-209ENST00000635885 ZFYVE9O95405 1425 aa13.83□□□□□ -0.2
SYNGAP1-209ENST00000635885 TRAK1Q9UPV9 953 aa13.83□□□□□ -0.2
SYNGAP1-209ENST00000635885 ARHGEF40Q8TER5 1519 aa13.83□□□□□ -0.2
SYNGAP1-209ENST00000635885 VGFO15240 615 aaPredicted RBP13.82□□□□□ -0.2
SYNGAP1-209ENST00000635885 IDI1Q13907 227 aa13.82□□□□□ -0.2
SYNGAP1-209ENST00000635885 SLC52A1Q9NWF4 448 aa13.82□□□□□ -0.2
SYNGAP1-209ENST00000635885 CLTCQ00610 1675 aaKnown RBP13.82□□□□□ -0.2
SYNGAP1-209ENST00000635885 TMEM132EQ6IEE7 984 aa13.81□□□□□ -0.2
SYNGAP1-209ENST00000635885 B4GALNT3Q6L9W6 998 aa13.81□□□□□ -0.2
SYNGAP1-209ENST00000635885 CARD14Q9BXL6 1004 aa13.81□□□□□ -0.2
SYNGAP1-209ENST00000635885 SALL2Q9Y467 1007 aaPredicted RBP13.81□□□□□ -0.2
SYNGAP1-209ENST00000635885 USP32Q8NFA0 1604 aa13.81□□□□□ -0.2
SYNGAP1-209ENST00000635885 ADAMTS8Q9UP79 889 aa13.8□□□□□ -0.2
SYNGAP1-209ENST00000635885 WDR43Q15061 677 aaKnown RBP eCLIP13.79□□□□□ -0.2
SYNGAP1-209ENST00000635885 PUS7Q96PZ0 661 aaKnown RBP13.78□□□□□ -0.2
SYNGAP1-209ENST00000635885 RCAN3Q9UKA8 241 aa13.78□□□□□ -0.2
SYNGAP1-209ENST00000635885 RBM19Q9Y4C8 960 aaKnown RBP13.78□□□□□ -0.2
SYNGAP1-209ENST00000635885 RRP1P56182 461 aaKnown RBP13.77□□□□□ -0.21
SYNGAP1-209ENST00000635885 NUTM2DQ5VT03 806 aaPredicted RBP13.77□□□□□ -0.21
SYNGAP1-209ENST00000635885 CDCA7LQ96GN5 454 aa13.77□□□□□ -0.21
SYNGAP1-209ENST00000635885 ESF1Q9H501 851 aaKnown RBP13.77□□□□□ -0.21
SYNGAP1-209ENST00000635885 TULP4Q9NRJ4 1543 aa13.77□□□□□ -0.21
SYNGAP1-209ENST00000635885 NSD3Q9BZ95 1437 aa13.75□□□□□ -0.21
SYNGAP1-209ENST00000635885 EVC2Q86UK5 1308 aa13.74□□□□□ -0.21
SYNGAP1-209ENST00000635885 FBXO31Q5XUX0 539 aaPredicted RBP13.74□□□□□ -0.21
SYNGAP1-209ENST00000635885 SHPRHQ149N8 1683 aa13.74□□□□□ -0.21
SYNGAP1-209ENST00000635885 ALKQ9UM73 1620 aa13.73□□□□□ -0.21
SYNGAP1-209ENST00000635885 SLC12A5Q9H2X9 1139 aa13.73□□□□□ -0.21
SYNGAP1-209ENST00000635885 SPATA31D1Q6ZQQ2 1576 aa13.73□□□□□ -0.21
SYNGAP1-209ENST00000635885 PLEKHH1Q9ULM0 1364 aa13.72□□□□□ -0.21
SYNGAP1-209ENST00000635885 ANKRD26Q9UPS8 1709 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms