RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-228	ENST00000635853	EIF3A	Q14152	1382 aa	Known RBP	12.02	□□□□□ -0.49
SPTAN1-228	ENST00000635853	LETM1	O95202	739 aa	Predicted RBP	12.01	□□□□□ -0.49
SPTAN1-228	ENST00000635853	CWC15	Q9P013	229 aa	Known RBP	12.01	□□□□□ -0.49
SPTAN1-228	ENST00000635853	GPS2	Q13227	327 aa		12.01	□□□□□ -0.49
SPTAN1-228	ENST00000635853	C1orf141	Q5JVX7	400 aa		12.01	□□□□□ -0.49
SPTAN1-228	ENST00000635853	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	12.01	□□□□□ -0.49	2e-7	■■■■■ 86.5
SPTAN1-228	ENST00000635853	NUTM2D	Q5VT03	806 aa	Predicted RBP	12.01	□□□□□ -0.49
SPTAN1-228	ENST00000635853	TERF2IP	Q9NYB0	399 aa		12.01	□□□□□ -0.49
SPTAN1-228	ENST00000635853	KIF3A	Q9Y496	699 aa		12.01	□□□□□ -0.49
SPTAN1-228	ENST00000635853	DYNC1I1	O14576	645 aa		12.01	□□□□□ -0.49
SPTAN1-228	ENST00000635853	DHX16	O60231	1041 aa	Known RBP	12.01	□□□□□ -0.49
SPTAN1-228	ENST00000635853	NUTM2F	A1L443	756 aa		12	□□□□□ -0.49
SPTAN1-228	ENST00000635853	GTPBP4	Q9BZE4	634 aa	Known RBP	12	□□□□□ -0.49
SPTAN1-228	ENST00000635853	MCM4	P33991	863 aa		12	□□□□□ -0.49
SPTAN1-228	ENST00000635853	SYNE3	Q6ZMZ3	975 aa		12	□□□□□ -0.49
SPTAN1-228	ENST00000635853	CCDC43	Q96MW1	224 aa	Known RBP	12	□□□□□ -0.49
SPTAN1-228	ENST00000635853		H3BQV1	296 aa		11.99	□□□□□ -0.49
SPTAN1-228	ENST00000635853	IFFO2	Q5TF58	517 aa		11.99	□□□□□ -0.49
SPTAN1-228	ENST00000635853	SMC4	Q9NTJ3	1288 aa		11.99	□□□□□ -0.49
SPTAN1-228	ENST00000635853	FMN1	Q68DA7	1419 aa		11.99	□□□□□ -0.49
SPTAN1-228	ENST00000635853	CCDC7	Q96M83	1385 aa		11.99	□□□□□ -0.49
SPTAN1-228	ENST00000635853	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.99	□□□□□ -0.49
SPTAN1-228	ENST00000635853	LMOD3	Q0VAK6	560 aa		11.99	□□□□□ -0.49
SPTAN1-228	ENST00000635853	VPS37D	Q86XT2	251 aa		11.98	□□□□□ -0.49
SPTAN1-228	ENST00000635853	SYTL4	Q96C24	671 aa	Predicted RBP	11.98	□□□□□ -0.49
SPTAN1-228	ENST00000635853	CGNL1	Q0VF96	1302 aa		11.98	□□□□□ -0.49
SPTAN1-228	ENST00000635853	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
SPTAN1-228	ENST00000635853	PATL2	C9JE40	543 aa	Known RBP	11.98	□□□□□ -0.49
SPTAN1-228	ENST00000635853	PCMTD1	Q96MG8	357 aa	Predicted RBP	11.97	□□□□□ -0.49
SPTAN1-228	ENST00000635853	RRAGD	Q9NQL2	400 aa	Predicted RBP	11.97	□□□□□ -0.49
SPTAN1-228	ENST00000635853	CBX1	P83916	185 aa		11.97	□□□□□ -0.49
SPTAN1-228	ENST00000635853	TTC5	Q8N0Z6	440 aa		11.97	□□□□□ -0.49
SPTAN1-228	ENST00000635853	WDR97	A6NE52	1622 aa		11.97	□□□□□ -0.49
SPTAN1-228	ENST00000635853	TPM1	P09493	284 aa		11.96	□□□□□ -0.5
SPTAN1-228	ENST00000635853	IRX3	P78415	501 aa	Predicted RBP	11.96	□□□□□ -0.5
SPTAN1-228	ENST00000635853	NGEF	Q8N5V2	710 aa		11.96	□□□□□ -0.5
SPTAN1-228	ENST00000635853	FAM184A	Q8NB25	1140 aa		11.96	□□□□□ -0.5
SPTAN1-228	ENST00000635853	DNAJC2	Q99543	621 aa	Known RBP	11.96	□□□□□ -0.5
SPTAN1-228	ENST00000635853	C22orf23	Q9BZE7	217 aa		11.96	□□□□□ -0.5
SPTAN1-228	ENST00000635853	NUCB2	P80303	420 aa		11.95	□□□□□ -0.5
SPTAN1-228	ENST00000635853	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.95	□□□□□ -0.5
SPTAN1-228	ENST00000635853	ST18	O60284	1047 aa		11.95	□□□□□ -0.5
SPTAN1-228	ENST00000635853	CCDC47	Q96A33	483 aa	Known RBP	11.95	□□□□□ -0.5
SPTAN1-228	ENST00000635853	CGN	Q9P2M7	1197 aa	Known RBP	11.95	□□□□□ -0.5
SPTAN1-228	ENST00000635853	PDCL2	Q8N4E4	241 aa		11.95	□□□□□ -0.5
SPTAN1-228	ENST00000635853	PKD2	Q13563	968 aa		11.94	□□□□□ -0.5
SPTAN1-228	ENST00000635853	CCDC70	Q6NSX1	233 aa		11.94	□□□□□ -0.5
SPTAN1-228	ENST00000635853	CARMIL2	Q6F5E8	1435 aa		11.94	□□□□□ -0.5
SPTAN1-228	ENST00000635853	MCTP1	Q6DN14	999 aa		11.94	□□□□□ -0.5
SPTAN1-228	ENST00000635853	RBM33	Q96EV2	1170 aa	Known RBP	11.94	□□□□□ -0.5
SPTAN1-228	ENST00000635853	RRBP1	Q9P2E9	1410 aa	Known RBP	11.94	□□□□□ -0.5
SPTAN1-228	ENST00000635853	TRIM29	Q14134	588 aa		11.93	□□□□□ -0.5
SPTAN1-228	ENST00000635853	CCDC94	Q9BW85	323 aa	Predicted RBP	11.93	□□□□□ -0.5
SPTAN1-228	ENST00000635853	CALCOCO1	Q9P1Z2	691 aa		11.93	□□□□□ -0.5
SPTAN1-228	ENST00000635853	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.93	□□□□□ -0.5
SPTAN1-228	ENST00000635853	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.93	□□□□□ -0.5
SPTAN1-228	ENST00000635853	CHMP4C	Q96CF2	233 aa		11.93	□□□□□ -0.5
SPTAN1-228	ENST00000635853	AAMP	Q13685	434 aa		11.93	□□□□□ -0.5
SPTAN1-228	ENST00000635853	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.93	□□□□□ -0.5
SPTAN1-228	ENST00000635853	L3MBTL2	Q969R5	705 aa		11.93	□□□□□ -0.5
SPTAN1-228	ENST00000635853	EFCAB2	Q5VUJ9	269 aa		11.92	□□□□□ -0.5
SPTAN1-228	ENST00000635853	KIF3B	O15066	747 aa		11.92	□□□□□ -0.5
SPTAN1-228	ENST00000635853	XRCC6	P12956	609 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
SPTAN1-228	ENST00000635853	CCAR2	Q8N163	923 aa	Known RBP	11.92	□□□□□ -0.5
SPTAN1-228	ENST00000635853	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.92	□□□□□ -0.5
SPTAN1-228	ENST00000635853	ARGLU1	Q9NWB6	273 aa	Predicted RBP	11.92	□□□□□ -0.5
SPTAN1-228	ENST00000635853	NACAD	O15069	1562 aa		11.92	□□□□□ -0.5
SPTAN1-228	ENST00000635853	MCM5	P33992	734 aa		11.92	□□□□□ -0.5
SPTAN1-228	ENST00000635853	RILPL2	Q969X0	211 aa		11.91	□□□□□ -0.5
SPTAN1-228	ENST00000635853	BRD4	O60885	1362 aa	Predicted RBP	11.91	□□□□□ -0.5
SPTAN1-228	ENST00000635853	ZNF592	Q92610	1267 aa		11.91	□□□□□ -0.5
SPTAN1-228	ENST00000635853	CCAR1	Q8IX12	1150 aa	Known RBP	11.9	□□□□□ -0.5
SPTAN1-228	ENST00000635853	MPHOSPH9	Q99550	1183 aa		11.9	□□□□□ -0.5
SPTAN1-228	ENST00000635853	NEXN	Q0ZGT2	675 aa		11.9	□□□□□ -0.5
SPTAN1-228	ENST00000635853	CCDC18	Q5T9S5	1454 aa		11.9	□□□□□ -0.5
SPTAN1-228	ENST00000635853	ODF2	Q5BJF6	829 aa		11.9	□□□□□ -0.5
SPTAN1-228	ENST00000635853	WWC2	Q6AWC2	1192 aa		11.9	□□□□□ -0.5
SPTAN1-228	ENST00000635853	AEBP1	Q8IUX7	1158 aa		11.9	□□□□□ -0.5
SPTAN1-228	ENST00000635853	CCDC146	Q8IYE0	955 aa		11.89	□□□□□ -0.51
SPTAN1-228	ENST00000635853	TSPY26P	Q9H489	355 aa		11.89	□□□□□ -0.51
SPTAN1-228	ENST00000635853	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.89	□□□□□ -0.51
SPTAN1-228	ENST00000635853	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	11.89	□□□□□ -0.51
SPTAN1-228	ENST00000635853	PAF1	Q8N7H5	531 aa		11.89	□□□□□ -0.51
SPTAN1-228	ENST00000635853	TMEM132A	Q24JP5	1023 aa		11.89	□□□□□ -0.51
SPTAN1-228	ENST00000635853	CT47A1	Q5JQC4	288 aa	Predicted RBP	11.89	□□□□□ -0.51
SPTAN1-228	ENST00000635853	CAVIN1	Q6NZI2	390 aa	Known RBP	11.89	□□□□□ -0.51
SPTAN1-228	ENST00000635853	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.89	□□□□□ -0.51
SPTAN1-228	ENST00000635853	PPP4R3B	Q5MIZ7	849 aa		11.89	□□□□□ -0.51
SPTAN1-228	ENST00000635853	TEF	Q10587	303 aa		11.88	□□□□□ -0.51
SPTAN1-228	ENST00000635853	KIF21B	O75037	1637 aa		11.88	□□□□□ -0.51
SPTAN1-228	ENST00000635853	OFD1	O75665	1012 aa		11.88	□□□□□ -0.51
SPTAN1-228	ENST00000635853	KIF20A	O95235	890 aa		11.88	□□□□□ -0.51
SPTAN1-228	ENST00000635853	NBPF1	Q3BBV0	1214 aa		11.88	□□□□□ -0.51
SPTAN1-228	ENST00000635853	ERICH2	A1L162	156 aa		11.88	□□□□□ -0.51
SPTAN1-228	ENST00000635853	GOLGA6L19	H0YKK7	550 aa		11.88	□□□□□ -0.51
SPTAN1-228	ENST00000635853	CPLX2	Q6PUV4	134 aa	Known RBP	11.88	□□□□□ -0.51
SPTAN1-228	ENST00000635853	KIF7	Q2M1P5	1343 aa		11.88	□□□□□ -0.51
SPTAN1-228	ENST00000635853	TERF1	P54274	439 aa		11.88	□□□□□ -0.51
SPTAN1-228	ENST00000635853	NFXL1	Q6ZNB6	911 aa		11.88	□□□□□ -0.51
SPTAN1-228	ENST00000635853	TIGD1	Q96MW7	591 aa		11.88	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms