RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 L3MBTL2Q969R5 705 aa12.43□□□□□ -0.42
CDKL5-209ENST00000635828 ZFYVE9O95405 1425 aa12.42□□□□□ -0.42
CDKL5-209ENST00000635828 NEURL4Q96JN8 1562 aa12.42□□□□□ -0.42
CDKL5-209ENST00000635828 THEMISQ8N1K5 641 aaPredicted RBP12.42□□□□□ -0.42
CDKL5-209ENST00000635828 SLC26A8Q96RN1 970 aa12.42□□□□□ -0.42
CDKL5-209ENST00000635828 RIMS2Q9UQ26 1411 aa12.42□□□□□ -0.42
CDKL5-209ENST00000635828 PPLO60437 1756 aa12.41□□□□□ -0.42
CDKL5-209ENST00000635828 IFT172Q9UG01 1749 aa12.4□□□□□ -0.42
CDKL5-209ENST00000635828 ARHGAP23Q9P227 1491 aa12.4□□□□□ -0.43
CDKL5-209ENST00000635828 SLIT1O75093 1534 aa12.39□□□□□ -0.43
CDKL5-209ENST00000635828 RBM33Q96EV2 1170 aaKnown RBP12.39□□□□□ -0.43
CDKL5-209ENST00000635828 POLR1AO95602 1720 aaPredicted RBP12.39□□□□□ -0.43
CDKL5-209ENST00000635828 BCANQ96GW7 911 aa12.38□□□□□ -0.43
CDKL5-209ENST00000635828 IQGAP1P46940 1657 aa12.38□□□□□ -0.43
CDKL5-209ENST00000635828 KDM5AP29375 1690 aaKnown RBP12.37□□□□□ -0.43
CDKL5-209ENST00000635828 NRXN3Q9Y4C0 1643 aa12.37□□□□□ -0.43
CDKL5-209ENST00000635828 PPP1R15AO75807 674 aaPredicted RBP12.37□□□□□ -0.43
CDKL5-209ENST00000635828 ANKLE2Q86XL3 938 aa12.37□□□□□ -0.43
CDKL5-209ENST00000635828 ACIN1Q9UKV3 1341 aaKnown RBP12.37□□□□□ -0.43
CDKL5-209ENST00000635828 NBPF8Q3BBV2 869 aa12.37□□□□□ -0.43
CDKL5-209ENST00000635828 SCAF11Q99590 1463 aaKnown RBP12.37□□□□□ -0.43
CDKL5-209ENST00000635828 TMEM132EQ6IEE7 984 aa12.36□□□□□ -0.43
CDKL5-209ENST00000635828 CFAP70Q5T0N1 1121 aa12.35□□□□□ -0.43
CDKL5-209ENST00000635828 NBPF1Q3BBV0 1214 aa12.34□□□□□ -0.43
CDKL5-209ENST00000635828 EID1Q9Y6B2 187 aa12.34□□□□□ -0.43
CDKL5-209ENST00000635828 ZNF335Q9H4Z2 1342 aaPredicted RBP12.34□□□□□ -0.43
CDKL5-209ENST00000635828 METP08581 1390 aa12.34□□□□□ -0.43
CDKL5-209ENST00000635828 ADAMTS13Q76LX8 1427 aa12.34□□□□□ -0.43
CDKL5-209ENST00000635828 STRCP1A6NGW2 1772 aa12.33□□□□□ -0.44
CDKL5-209ENST00000635828 NPHP4O75161 1426 aaPredicted RBP12.33□□□□□ -0.44
CDKL5-209ENST00000635828 TONSLQ96HA7 1378 aa12.33□□□□□ -0.44
CDKL5-209ENST00000635828 SETD1AO15047 1707 aaKnown RBP12.31□□□□□ -0.44
CDKL5-209ENST00000635828 PIK3C2GO75747 1445 aa12.31□□□□□ -0.44
CDKL5-209ENST00000635828 PTPRUQ92729 1446 aa12.31□□□□□ -0.44
CDKL5-209ENST00000635828 ASXL1Q8IXJ9 1541 aa12.3□□□□□ -0.44
CDKL5-209ENST00000635828 MED14O60244 1454 aa12.3□□□□□ -0.44
CDKL5-209ENST00000635828 PLEKHG1Q9ULL1 1385 aa12.3□□□□□ -0.44
CDKL5-209ENST00000635828 ALKQ9UM73 1620 aa12.3□□□□□ -0.44
CDKL5-209ENST00000635828 VGFO15240 615 aaPredicted RBP12.3□□□□□ -0.44
CDKL5-209ENST00000635828 STK26Q9P289 416 aa12.3□□□□□ -0.44
CDKL5-209ENST00000635828 PRAG1Q86YV5 1406 aa12.29□□□□□ -0.44
CDKL5-209ENST00000635828 NRXN1Q9ULB1 1477 aa12.29□□□□□ -0.44
CDKL5-209ENST00000635828 RPGRIP1LQ68CZ1 1315 aa12.28□□□□□ -0.44
CDKL5-209ENST00000635828 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.28□□□□□ -0.44
CDKL5-209ENST00000635828 SETBP1Q9Y6X0 1596 aa12.28□□□□□ -0.44
CDKL5-209ENST00000635828 MYOM2P54296 1465 aa12.27□□□□□ -0.44
CDKL5-209ENST00000635828 KCNA6P17658 529 aa12.27□□□□□ -0.45
CDKL5-209ENST00000635828 CLSPNQ9HAW4 1339 aa12.26□□□□□ -0.45
CDKL5-209ENST00000635828 SAFB2Q14151 953 aaKnown RBP eCLIP12.26□□□□□ -0.45
CDKL5-209ENST00000635828 HIRIP3Q9BW71 556 aaPredicted RBP12.26□□□□□ -0.45
CDKL5-209ENST00000635828 C14orf93Q9H972 538 aaKnown RBP12.26□□□□□ -0.45
CDKL5-209ENST00000635828 WAPLQ7Z5K2 1190 aa12.25□□□□□ -0.45
CDKL5-209ENST00000635828 TRPM1Q7Z4N2 1603 aa12.25□□□□□ -0.45
CDKL5-209ENST00000635828 TRAK1Q9UPV9 953 aa12.25□□□□□ -0.45
CDKL5-209ENST00000635828 AMOTL2Q9Y2J4 779 aa12.24□□□□□ -0.45
CDKL5-209ENST00000635828 ADGRB1O14514 1584 aa12.24□□□□□ -0.45
CDKL5-209ENST00000635828 CHD2O14647 1828 aaKnown RBP12.24□□□□□ -0.45
CDKL5-209ENST00000635828 PLEKHH1Q9ULM0 1364 aa12.24□□□□□ -0.45
CDKL5-209ENST00000635828 HDGFP51858 240 aaKnown RBP12.24□□□□□ -0.45
CDKL5-209ENST00000635828 TBX22Q9Y458 520 aa12.23□□□□□ -0.45
CDKL5-209ENST00000635828 ROBO2Q9HCK4 1378 aa12.22□□□□□ -0.45
CDKL5-209ENST00000635828 XIRP1Q702N8 1843 aaKnown RBP12.21□□□□□ -0.45
CDKL5-209ENST00000635828 LTBP4Q8N2S1 1624 aa12.2□□□□□ -0.46
CDKL5-209ENST00000635828 ROCK2O75116 1388 aaKnown RBP12.2□□□□□ -0.46
CDKL5-209ENST00000635828 YTHDC2Q9H6S0 1430 aaKnown RBP12.2□□□□□ -0.46
CDKL5-209ENST00000635828 DMRT2Q9Y5R5 561 aa12.19□□□□□ -0.46
CDKL5-209ENST00000635828 XRN1Q8IZH2 1706 aaKnown RBP12.19□□□□□ -0.46
CDKL5-209ENST00000635828 NUTM2FA1L443 756 aa12.18□□□□□ -0.46
CDKL5-209ENST00000635828 PRAM1Q96QH2 718 aa12.18□□□□□ -0.46
CDKL5-209ENST00000635828 CARD11Q9BXL7 1154 aa12.18□□□□□ -0.46
CDKL5-209ENST00000635828 LRRC7Q96NW7 1537 aa12.17□□□□□ -0.46
CDKL5-209ENST00000635828 DIP2AQ14689 1571 aa12.17□□□□□ -0.46
CDKL5-209ENST00000635828 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.17□□□□□ -0.46
CDKL5-209ENST00000635828 ARHGEF28Q8N1W1 1705 aaKnown RBP12.16□□□□□ -0.46
CDKL5-209ENST00000635828 PROSER2Q86WR7 435 aaPredicted RBP12.16□□□□□ -0.46
CDKL5-209ENST00000635828 TMEM94Q12767 1356 aa12.16□□□□□ -0.46
CDKL5-209ENST00000635828 RALGAPBQ86X10 1494 aa12.16□□□□□ -0.46
CDKL5-209ENST00000635828 LAMC1P11047 1609 aa12.16□□□□□ -0.46
CDKL5-209ENST00000635828 NWD1Q149M9 1564 aa12.15□□□□□ -0.46
CDKL5-209ENST00000635828 KIAA1210Q9ULL0 1709 aa12.15□□□□□ -0.46
CDKL5-209ENST00000635828 NALCNQ8IZF0 1738 aa12.14□□□□□ -0.47
CDKL5-209ENST00000635828 MINK1Q8N4C8 1332 aaPredicted RBP12.14□□□□□ -0.47
CDKL5-209ENST00000635828 LRPPRCP42704 1394 aaKnown RBP12.14□□□□□ -0.47
CDKL5-209ENST00000635828 ST20-MTHFSA0A0A6YYL1 179 aa12.13□□□□□ -0.47
CDKL5-209ENST00000635828 TIMELESSQ9UNS1 1208 aa12.13□□□□□ -0.47
CDKL5-209ENST00000635828 ABCC11Q96J66 1382 aa12.12□□□□□ -0.47
CDKL5-209ENST00000635828 C14orf37Q86TY3 774 aa12.12□□□□□ -0.47
CDKL5-209ENST00000635828 CPS1P31327 1500 aa12.11□□□□□ -0.47
CDKL5-209ENST00000635828 STAC3Q96MF2 364 aa12.11□□□□□ -0.47
CDKL5-209ENST00000635828 GPRASP1Q5JY77 1395 aa12.11□□□□□ -0.47
CDKL5-209ENST00000635828 KNDC1Q76NI1 1749 aa12.11□□□□□ -0.47
CDKL5-209ENST00000635828 PIK3R4Q99570 1358 aa12.11□□□□□ -0.47
CDKL5-209ENST00000635828 POGKQ9P215 609 aa12.11□□□□□ -0.47
CDKL5-209ENST00000635828 USP47Q96K76 1375 aa12.1□□□□□ -0.47
CDKL5-209ENST00000635828 RGPD8O14715 1765 aaPredicted RBP12.1□□□□□ -0.47
CDKL5-209ENST00000635828 TECPR2O15040 1411 aa12.1□□□□□ -0.47
CDKL5-209ENST00000635828 QRICH2Q9H0J4 1663 aa12.1□□□□□ -0.47
CDKL5-209ENST00000635828 C11orf95C9JLR9 678 aaPredicted RBP12.1□□□□□ -0.47
CDKL5-209ENST00000635828 HSPA5P11021 654 aaKnown RBP12.09□□□□□ -0.47
CDKL5-209ENST00000635828 CERKQ8TCT0 537 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms