RNA–Protein interactions for RNA: ENST00000635688.1

SMARCA2-245, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-245ENST00000635688 RNF40O75150 1001 aa14.87□□□□□ -0.03
SMARCA2-245ENST00000635688 APLP1P51693 650 aa14.87□□□□□ -0.03
SMARCA2-245ENST00000635688 MTRQ99707 1265 aa14.87□□□□□ -0.03
SMARCA2-245ENST00000635688 SWT1Q5T5J6 900 aaKnown RBP14.85□□□□□ -0.03
SMARCA2-245ENST00000635688 ZNF516Q92618 1163 aa14.84□□□□□ -0.03
SMARCA2-245ENST00000635688 EYA1Q99502 592 aa14.84□□□□□ -0.03
SMARCA2-245ENST00000635688 MRC2Q9UBG0 1479 aa14.82□□□□□ -0.04
SMARCA2-245ENST00000635688 IL21Q9HBE4 155 aa14.8□□□□□ -0.04
SMARCA2-245ENST00000635688 CADPSQ9ULU8 1353 aa14.8□□□□□ -0.04
SMARCA2-245ENST00000635688 HDGFP51858 240 aaKnown RBP14.79□□□□□ -0.04
SMARCA2-245ENST00000635688 PTGDRQ13258 359 aa14.79□□□□□ -0.04
SMARCA2-245ENST00000635688 WDR62O43379 1518 aa14.77□□□□□ -0.04
SMARCA2-245ENST00000635688 MROH2BQ7Z745 1585 aa14.77□□□□□ -0.05
SMARCA2-245ENST00000635688 PPP1R18Q6NYC8 613 aa14.75□□□□□ -0.05
SMARCA2-245ENST00000635688 NKX2-3Q8TAU0 364 aa14.75□□□□□ -0.05
SMARCA2-245ENST00000635688 SLF2Q8IX21 1173 aa14.74□□□□□ -0.05
SMARCA2-245ENST00000635688 SEMA3EO15041 775 aa14.73□□□□□ -0.05
SMARCA2-245ENST00000635688 FAM161AQ3B820 660 aa14.73□□□□□ -0.05
SMARCA2-245ENST00000635688 COPS2P61201 443 aa14.72□□□□□ -0.05
SMARCA2-245ENST00000635688 ADGRG1Q9Y653 693 aa14.7□□□□□ -0.06
SMARCA2-245ENST00000635688 NUTM2FA1L443 756 aa14.69□□□□□ -0.06
SMARCA2-245ENST00000635688 PRKD2Q9BZL6 878 aa14.68□□□□□ -0.06
SMARCA2-245ENST00000635688 CEP164Q9UPV0 1460 aa14.67□□□□□ -0.06
SMARCA2-245ENST00000635688 Q6ZNB5 142 aa14.66□□□□□ -0.06
SMARCA2-245ENST00000635688 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.65□□□□□ -0.06
SMARCA2-245ENST00000635688 DNAJB2P25686 324 aa14.64□□□□□ -0.07
SMARCA2-245ENST00000635688 P3H3Q8IVL6 736 aa14.64□□□□□ -0.07
SMARCA2-245ENST00000635688 TMEM134Q9H6X4 195 aa14.64□□□□□ -0.07
SMARCA2-245ENST00000635688 LCE2BO14633 110 aa14.63□□□□□ -0.07
SMARCA2-245ENST00000635688 NECTIN2Q92692 538 aa14.63□□□□□ -0.07
SMARCA2-245ENST00000635688 RCCD1A6NED2 376 aa14.62□□□□□ -0.07
SMARCA2-245ENST00000635688 RBM46Q8TBY0 533 aaKnown RBP14.62□□□□□ -0.07
SMARCA2-245ENST00000635688 FANCD2Q9BXW9 1451 aa14.62□□□□□ -0.07
SMARCA2-245ENST00000635688 ZPR1O75312 459 aa14.61□□□□□ -0.07
SMARCA2-245ENST00000635688 GFRA3O60609 400 aa14.6□□□□□ -0.07
SMARCA2-245ENST00000635688 BLOC1S3Q6QNY0 202 aa14.6□□□□□ -0.07
SMARCA2-245ENST00000635688 PCDHB3Q9Y5E6 796 aa14.59□□□□□ -0.07
SMARCA2-245ENST00000635688 RIMBP3CA6NJZ7 1639 aa14.59□□□□□ -0.07
SMARCA2-245ENST00000635688 RIMBP3BA6NNM3 1639 aa14.59□□□□□ -0.07
SMARCA2-245ENST00000635688 RIMBP3Q9UFD9 1639 aa14.59□□□□□ -0.07
SMARCA2-245ENST00000635688 FCHSD2O94868 740 aa14.58□□□□□ -0.08
SMARCA2-245ENST00000635688 SLC4A3P48751 1232 aa14.57□□□□□ -0.08
SMARCA2-245ENST00000635688 RBM26Q5T8P6 1007 aaKnown RBP14.57□□□□□ -0.08
SMARCA2-245ENST00000635688 PLCB2Q00722 1185 aa14.56□□□□□ -0.08
SMARCA2-245ENST00000635688 V9GY48 417 aaPredicted RBP14.56□□□□□ -0.08
SMARCA2-245ENST00000635688 WIZO95785 1651 aa14.55□□□□□ -0.08
SMARCA2-245ENST00000635688 TLL1O43897 1013 aa14.55□□□□□ -0.08
SMARCA2-245ENST00000635688 SLC10A3P09131 477 aa14.55□□□□□ -0.08
SMARCA2-245ENST00000635688 TESPA1A2RU30 521 aaPredicted RBP14.54□□□□□ -0.08
SMARCA2-245ENST00000635688 CFTRP13569 1480 aa14.53□□□□□ -0.08
SMARCA2-245ENST00000635688 PRR14Q9BWN1 585 aa14.53□□□□□ -0.08
SMARCA2-245ENST00000635688 URB2Q14146 1524 aaKnown RBP14.52□□□□□ -0.08
SMARCA2-245ENST00000635688 LAPTM4AQ15012 233 aa14.52□□□□□ -0.09
SMARCA2-245ENST00000635688 PXYLP1Q8TE99 480 aa14.52□□□□□ -0.09
SMARCA2-245ENST00000635688 ACTN4O43707 911 aaKnown RBP14.51□□□□□ -0.09
SMARCA2-245ENST00000635688 CFHP08603 1231 aa14.51□□□□□ -0.09
SMARCA2-245ENST00000635688 FECHP22830 423 aa14.51□□□□□ -0.09
SMARCA2-245ENST00000635688 EMID1Q96A84 441 aaPredicted RBP14.5□□□□□ -0.09
SMARCA2-245ENST00000635688 ARHGEF11O15085 1522 aa14.5□□□□□ -0.09
SMARCA2-245ENST00000635688 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.48□□□□□ -0.09
SMARCA2-245ENST00000635688 RNF223E7ERA6 249 aa14.48□□□□□ -0.09
SMARCA2-245ENST00000635688 GGCXP38435 758 aa14.48□□□□□ -0.09
SMARCA2-245ENST00000635688 TMUB1Q9BVT8 246 aa14.48□□□□□ -0.09
SMARCA2-245ENST00000635688 GPR37O15354 613 aa14.47□□□□□ -0.09
SMARCA2-245ENST00000635688 CYB5RLQ6IPT4 315 aa14.47□□□□□ -0.09
SMARCA2-245ENST00000635688 NRG2O14511 850 aaPredicted RBP14.46□□□□□ -0.09
SMARCA2-245ENST00000635688 HIC1Q14526 733 aa14.46□□□□□ -0.09
SMARCA2-245ENST00000635688 KMT5BQ4FZB7 885 aa14.46□□□□□ -0.09
SMARCA2-245ENST00000635688 METTL3Q86U44 580 aaKnown RBP14.46□□□□□ -0.09
SMARCA2-245ENST00000635688 TRAF7Q6Q0C0 670 aa14.45□□□□□ -0.1
SMARCA2-245ENST00000635688 PPEF1O14829 653 aaPredicted RBP14.44□□□□□ -0.1
SMARCA2-245ENST00000635688 OATP04181 439 aa14.44□□□□□ -0.1
SMARCA2-245ENST00000635688 ZNF608Q9ULD9 1512 aaPredicted RBP14.42□□□□□ -0.1
SMARCA2-245ENST00000635688 PDZRN3Q9UPQ7 1066 aa14.42□□□□□ -0.1
SMARCA2-245ENST00000635688 S1PR4O95977 384 aa14.41□□□□□ -0.1
SMARCA2-245ENST00000635688 NLRP7Q8WX94 980 aa14.41□□□□□ -0.1
SMARCA2-245ENST00000635688 GNPATO15228 680 aa14.4□□□□□ -0.1
SMARCA2-245ENST00000635688 TRIM67Q6ZTA4 783 aa14.4□□□□□ -0.1
SMARCA2-245ENST00000635688 IFT140Q96RY7 1462 aa14.39□□□□□ -0.11
SMARCA2-245ENST00000635688 PUS10Q3MIT2 529 aaKnown RBP14.38□□□□□ -0.11
SMARCA2-245ENST00000635688 SLC19A1P41440 591 aa14.37□□□□□ -0.11
SMARCA2-245ENST00000635688 KDM2AQ9Y2K7 1162 aa14.37□□□□□ -0.11
SMARCA2-245ENST00000635688 ADH1BP00325 375 aa14.35□□□□□ -0.11
SMARCA2-245ENST00000635688 SMYD5Q6GMV2 418 aa14.35□□□□□ -0.11
SMARCA2-245ENST00000635688 SCUBE3Q8IX30 993 aa14.35□□□□□ -0.11
SMARCA2-245ENST00000635688 ANKLE1Q8NAG6 615 aa14.35□□□□□ -0.11
SMARCA2-245ENST00000635688 PHOX2BQ99453 314 aa14.35□□□□□ -0.11
SMARCA2-245ENST00000635688 LIAT1Q6ZQX7 453 aa14.34□□□□□ -0.11
SMARCA2-245ENST00000635688 ARAP1Q96P48 1450 aa14.33□□□□□ -0.12
SMARCA2-245ENST00000635688 NR1I2O75469 434 aa14.33□□□□□ -0.12
SMARCA2-245ENST00000635688 HAP1P54257 671 aaPredicted RBP14.33□□□□□ -0.12
SMARCA2-245ENST00000635688 TOP2AP11388 1531 aaKnown RBP14.32□□□□□ -0.12
SMARCA2-245ENST00000635688 PLA2G2CQ5R387 149 aa14.32□□□□□ -0.12
SMARCA2-245ENST00000635688 SPRYD7Q5W111 196 aa14.32□□□□□ -0.12
SMARCA2-245ENST00000635688 DAXXQ9UER7 740 aaPredicted RBP14.31□□□□□ -0.12
SMARCA2-245ENST00000635688 RSF1Q96T23 1441 aaPredicted RBP14.31□□□□□ -0.12
SMARCA2-245ENST00000635688 PRDM2Q13029 1718 aa14.3□□□□□ -0.12
SMARCA2-245ENST00000635688 SLC6A16Q9GZN6 736 aa14.29□□□□□ -0.12
SMARCA2-245ENST00000635688 TOPBP1Q92547 1522 aa14.29□□□□□ -0.12
SMARCA2-245ENST00000635688 EIF4G3O43432 1585 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms