RNA–Protein interactions for RNA: ENST00000635252.1

PRDM9-203, Transcript of PR/SET domain 9, humanhuman

TSL 5

Gene PRDM9, Length 1,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-203ENST00000635252 RIMS2Q9UQ26 1411 aa19.72■□□□□ 0.75
PRDM9-203ENST00000635252 RGL3Q3MIN7 710 aa19.71■□□□□ 0.75
PRDM9-203ENST00000635252 SPATA31E1Q6ZUB1 1445 aa19.71■□□□□ 0.75
PRDM9-203ENST00000635252 SCAF11Q99590 1463 aaKnown RBP19.7■□□□□ 0.74
PRDM9-203ENST00000635252 EID1Q9Y6B2 187 aa19.7■□□□□ 0.74
PRDM9-203ENST00000635252 SIN3AQ96ST3 1273 aa19.68■□□□□ 0.74
PRDM9-203ENST00000635252 NEXMIFQ5QGS0 1516 aa19.66■□□□□ 0.74
PRDM9-203ENST00000635252 NPHP4O75161 1426 aaPredicted RBP19.66■□□□□ 0.74
PRDM9-203ENST00000635252 PPP1R15AO75807 674 aaPredicted RBP19.66■□□□□ 0.74
PRDM9-203ENST00000635252 MED14O60244 1454 aa19.65■□□□□ 0.74
PRDM9-203ENST00000635252 IQGAP1P46940 1657 aa19.63■□□□□ 0.73
PRDM9-203ENST00000635252 NEUROD1Q13562 356 aa19.63■□□□□ 0.73
PRDM9-203ENST00000635252 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.63■□□□□ 0.73
PRDM9-203ENST00000635252 DMRT2Q9Y5R5 561 aa19.63■□□□□ 0.73
PRDM9-203ENST00000635252 HDGFP51858 240 aaKnown RBP19.62■□□□□ 0.73
PRDM9-203ENST00000635252 PPLO60437 1756 aa19.62■□□□□ 0.73
PRDM9-203ENST00000635252 BCANQ96GW7 911 aa19.61■□□□□ 0.73
PRDM9-203ENST00000635252 RPGRIP1LQ68CZ1 1315 aa19.61■□□□□ 0.73
PRDM9-203ENST00000635252 SLC26A8Q96RN1 970 aa19.61■□□□□ 0.73
PRDM9-203ENST00000635252 PLEKHG1Q9ULL1 1385 aa19.6■□□□□ 0.73
PRDM9-203ENST00000635252 IFT172Q9UG01 1749 aa19.59■□□□□ 0.73
PRDM9-203ENST00000635252 ADGRF5Q8IZF2 1346 aa19.58■□□□□ 0.73
PRDM9-203ENST00000635252 VGFO15240 615 aaPredicted RBP19.56■□□□□ 0.72
PRDM9-203ENST00000635252 CCER1Q8TC90 406 aaPredicted RBP19.56■□□□□ 0.72
PRDM9-203ENST00000635252 DCAF11Q8TEB1 546 aa19.56■□□□□ 0.72
PRDM9-203ENST00000635252 KDM2AQ9Y2K7 1162 aa19.56■□□□□ 0.72
PRDM9-203ENST00000635252 NRXN3Q9Y4C0 1643 aa19.56■□□□□ 0.72
PRDM9-203ENST00000635252 ADAMTS13Q76LX8 1427 aa19.55■□□□□ 0.72
PRDM9-203ENST00000635252 ZNF335Q9H4Z2 1342 aaPredicted RBP19.55■□□□□ 0.72
PRDM9-203ENST00000635252 SETBP1Q9Y6X0 1596 aa19.53■□□□□ 0.72
PRDM9-203ENST00000635252 L3MBTL2Q969R5 705 aa19.52■□□□□ 0.72
PRDM9-203ENST00000635252 MYOM2P54296 1465 aa19.5■□□□□ 0.71
PRDM9-203ENST00000635252 TBX22Q9Y458 520 aa19.5■□□□□ 0.71
PRDM9-203ENST00000635252 STRCP1A6NGW2 1772 aa19.49■□□□□ 0.71
PRDM9-203ENST00000635252 PIK3C2GO75747 1445 aa19.49■□□□□ 0.71
PRDM9-203ENST00000635252 NRXN1Q9ULB1 1477 aa19.48■□□□□ 0.71
PRDM9-203ENST00000635252 ALKQ9UM73 1620 aa19.48■□□□□ 0.71
PRDM9-203ENST00000635252 METP08581 1390 aa19.47■□□□□ 0.71
PRDM9-203ENST00000635252 LTBP4Q8N2S1 1624 aa19.46■□□□□ 0.71
PRDM9-203ENST00000635252 SETD1AO15047 1707 aaKnown RBP19.46■□□□□ 0.71
PRDM9-203ENST00000635252 CLSPNQ9HAW4 1339 aa19.45■□□□□ 0.7
PRDM9-203ENST00000635252 DIP2AQ14689 1571 aa19.45■□□□□ 0.7
PRDM9-203ENST00000635252 CFAP70Q5T0N1 1121 aa19.45■□□□□ 0.7
PRDM9-203ENST00000635252 PTPRUQ92729 1446 aa19.44■□□□□ 0.7
PRDM9-203ENST00000635252 TONSLQ96HA7 1378 aa19.44■□□□□ 0.7
PRDM9-203ENST00000635252 TMEM132EQ6IEE7 984 aa19.43■□□□□ 0.7
PRDM9-203ENST00000635252 CHD2O14647 1828 aaKnown RBP19.43■□□□□ 0.7
PRDM9-203ENST00000635252 KCNA6P17658 529 aa19.42■□□□□ 0.7
PRDM9-203ENST00000635252 C14orf93Q9H972 538 aaKnown RBP19.42■□□□□ 0.7
PRDM9-203ENST00000635252 ASXL1Q8IXJ9 1541 aa19.41■□□□□ 0.7
PRDM9-203ENST00000635252 RBM33Q96EV2 1170 aaKnown RBP19.41■□□□□ 0.7
PRDM9-203ENST00000635252 STAC3Q96MF2 364 aa19.41■□□□□ 0.7
PRDM9-203ENST00000635252 AMOTL2Q9Y2J4 779 aa19.41■□□□□ 0.7
PRDM9-203ENST00000635252 PRAG1Q86YV5 1406 aa19.4■□□□□ 0.7
PRDM9-203ENST00000635252 PIK3R4Q99570 1358 aa19.4■□□□□ 0.7
PRDM9-203ENST00000635252 NWD1Q149M9 1564 aa19.39■□□□□ 0.69
PRDM9-203ENST00000635252 NBPF8Q3BBV2 869 aa19.37■□□□□ 0.69
PRDM9-203ENST00000635252 XRN1Q8IZH2 1706 aaKnown RBP19.37■□□□□ 0.69
PRDM9-203ENST00000635252 STK26Q9P289 416 aa19.36■□□□□ 0.69
PRDM9-203ENST00000635252 CPS1P31327 1500 aa19.36■□□□□ 0.69
PRDM9-203ENST00000635252 LRRC7Q96NW7 1537 aa19.36■□□□□ 0.69
PRDM9-203ENST00000635252 NBPF1Q3BBV0 1214 aa19.35■□□□□ 0.69
PRDM9-203ENST00000635252 PROSER2Q86WR7 435 aaPredicted RBP19.35■□□□□ 0.69
PRDM9-203ENST00000635252 CERKQ8TCT0 537 aa19.35■□□□□ 0.69
PRDM9-203ENST00000635252 LAMC1P11047 1609 aa19.35■□□□□ 0.69
PRDM9-203ENST00000635252 ADGRB1O14514 1584 aa19.34■□□□□ 0.69
PRDM9-203ENST00000635252 NKTRP30414 1462 aaKnown RBP19.33■□□□□ 0.69
PRDM9-203ENST00000635252 YTHDC2Q9H6S0 1430 aaKnown RBP19.33■□□□□ 0.68
PRDM9-203ENST00000635252 XIRP1Q702N8 1843 aaKnown RBP19.33■□□□□ 0.68
PRDM9-203ENST00000635252 TMEM94Q12767 1356 aa19.33■□□□□ 0.68
PRDM9-203ENST00000635252 LRPPRCP42704 1394 aaKnown RBP19.32■□□□□ 0.68
PRDM9-203ENST00000635252 ROBO2Q9HCK4 1378 aa19.32■□□□□ 0.68
PRDM9-203ENST00000635252 KIAA1210Q9ULL0 1709 aa19.31■□□□□ 0.68
PRDM9-203ENST00000635252 TRPM1Q7Z4N2 1603 aa19.3■□□□□ 0.68
PRDM9-203ENST00000635252 ABCC11Q96J66 1382 aa19.29■□□□□ 0.68
PRDM9-203ENST00000635252 TIMELESSQ9UNS1 1208 aa19.28■□□□□ 0.68
PRDM9-203ENST00000635252 TRAK1Q9UPV9 953 aa19.28■□□□□ 0.68
PRDM9-203ENST00000635252 WAPLQ7Z5K2 1190 aa19.27■□□□□ 0.68
PRDM9-203ENST00000635252 TECPR2O15040 1411 aa19.27■□□□□ 0.68
PRDM9-203ENST00000635252 PTCH1Q13635 1447 aa19.27■□□□□ 0.68
PRDM9-203ENST00000635252 PLEKHH1Q9ULM0 1364 aa19.27■□□□□ 0.67
PRDM9-203ENST00000635252 KNDC1Q76NI1 1749 aa19.25■□□□□ 0.67
PRDM9-203ENST00000635252 C14orf37Q86TY3 774 aa19.25■□□□□ 0.67
PRDM9-203ENST00000635252 ROCK2O75116 1388 aaKnown RBP19.24■□□□□ 0.67
PRDM9-203ENST00000635252 SAFB2Q14151 953 aaKnown RBP eCLIP19.23■□□□□ 0.67
PRDM9-203ENST00000635252 RALGAPBQ86X10 1494 aa19.22■□□□□ 0.67
PRDM9-203ENST00000635252 PRAM1Q96QH2 718 aa19.22■□□□□ 0.67
PRDM9-203ENST00000635252 IQSEC2Q5JU85 1478 aa19.22■□□□□ 0.67
PRDM9-203ENST00000635252 DLC1Q96QB1 1528 aa19.21■□□□□ 0.67
PRDM9-203ENST00000635252 NALCNQ8IZF0 1738 aa19.21■□□□□ 0.67
PRDM9-203ENST00000635252 ARHGEF28Q8N1W1 1705 aaKnown RBP19.2■□□□□ 0.66
PRDM9-203ENST00000635252 GPRASP1Q5JY77 1395 aa19.2■□□□□ 0.66
PRDM9-203ENST00000635252 FAM135BQ49AJ0 1406 aa19.2■□□□□ 0.66
PRDM9-203ENST00000635252 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.19■□□□□ 0.66
PRDM9-203ENST00000635252 SIRT1Q96EB6 747 aa19.19■□□□□ 0.66
PRDM9-203ENST00000635252 ADGRL3Q9HAR2 1447 aa19.19■□□□□ 0.66
PRDM9-203ENST00000635252 POGKQ9P215 609 aa19.19■□□□□ 0.66
PRDM9-203ENST00000635252 NCOA3Q9Y6Q9 1424 aa19.19■□□□□ 0.66
PRDM9-203ENST00000635252 MSH6P52701 1360 aa19.18■□□□□ 0.66
PRDM9-203ENST00000635252 UBAP1LF5GYI3 381 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms