RNA–Protein interactions for RNA: ENST00000634403.1

SMARCA2-222, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2

Gene SMARCA2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-222ENST00000634403 DAXXQ9UER7 740 aaPredicted RBP8.85□□□□□ -0.99
SMARCA2-222ENST00000634403 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.84□□□□□ -0.99
SMARCA2-222ENST00000634403 POTEB3A0JP26 581 aa8.84□□□□□ -0.99
SMARCA2-222ENST00000634403 RCCD1A6NED2 376 aa8.84□□□□□ -0.99
SMARCA2-222ENST00000634403 SMAPO00193 183 aa8.84□□□□□ -0.99
SMARCA2-222ENST00000634403 POTEBQ6S5H4 581 aa8.84□□□□□ -0.99
SMARCA2-222ENST00000634403 ZNF687Q8N1G0 1237 aa8.84□□□□□ -0.99
SMARCA2-222ENST00000634403 HS3ST6Q96QI5 342 aa8.84□□□□□ -0.99
SMARCA2-222ENST00000634403 ONECUT3O60422 494 aaPredicted RBP8.83□□□□□ -1
SMARCA2-222ENST00000634403 PBX2P40425 430 aa8.83□□□□□ -1
SMARCA2-222ENST00000634403 FAM217BQ9NTX9 383 aaPredicted RBP8.83□□□□□ -1
SMARCA2-222ENST00000634403 KIAA1468Q9P260 1216 aa8.83□□□□□ -1
SMARCA2-222ENST00000634403 BAZ1BQ9UIG0 1483 aaKnown RBP8.83□□□□□ -1
SMARCA2-222ENST00000634403 SSTR3P32745 418 aaPredicted RBP8.82□□□□□ -1
SMARCA2-222ENST00000634403 NCAPD3P42695 1498 aa8.82□□□□□ -1
SMARCA2-222ENST00000634403 DNAJB2P25686 324 aa8.81□□□□□ -1
SMARCA2-222ENST00000634403 SLC4A5Q9BY07 1137 aa8.8□□□□□ -1
SMARCA2-222ENST00000634403 HMGXB3Q12766 1538 aa8.8□□□□□ -1
SMARCA2-222ENST00000634403 BEGAINQ9BUH8 593 aa8.79□□□□□ -1
SMARCA2-222ENST00000634403 TMEM134Q9H6X4 195 aa8.79□□□□□ -1
SMARCA2-222ENST00000634403 SEPT9Q9UHD8 586 aaPredicted RBP8.79□□□□□ -1
SMARCA2-222ENST00000634403 RABGEF1Q9UJ41 708 aa8.79□□□□□ -1
SMARCA2-222ENST00000634403 VPS9D1Q9Y2B5 631 aa8.79□□□□□ -1
SMARCA2-222ENST00000634403 DDX11L8A8MPP1 907 aa8.75□□□□□ -1.01
SMARCA2-222ENST00000634403 LOC105371045A0A1W2PR82 267 aa8.74□□□□□ -1.01
SMARCA2-222ENST00000634403 SULF1Q8IWU6 871 aa8.74□□□□□ -1.01
SMARCA2-222ENST00000634403 CD46P15529 392 aa8.73□□□□□ -1.01
SMARCA2-222ENST00000634403 LSM11P83369 360 aaKnown RBP eCLIP8.73□□□□□ -1.01
SMARCA2-222ENST00000634403 FAM98CQ17RN3 349 aaKnown RBP8.73□□□□□ -1.01
SMARCA2-222ENST00000634403 SH3D19Q5HYK7 790 aa8.73□□□□□ -1.01
SMARCA2-222ENST00000634403 GOPCQ9HD26 462 aa8.73□□□□□ -1.01
SMARCA2-222ENST00000634403 TK2O00142 265 aa8.72□□□□□ -1.01
SMARCA2-222ENST00000634403 SWT1Q5T5J6 900 aaKnown RBP8.72□□□□□ -1.01
SMARCA2-222ENST00000634403 NBPF3Q9H094 633 aa8.72□□□□□ -1.01
SMARCA2-222ENST00000634403 ABCC8Q09428 1581 aa8.71□□□□□ -1.02
SMARCA2-222ENST00000634403 ADGRD1Q6QNK2 874 aa8.71□□□□□ -1.02
SMARCA2-222ENST00000634403 RDH13Q8NBN7 331 aa8.71□□□□□ -1.02
SMARCA2-222ENST00000634403 RSPH6AQ9H0K4 717 aa8.71□□□□□ -1.02
SMARCA2-222ENST00000634403 TIMELESSQ9UNS1 1208 aa8.71□□□□□ -1.02
SMARCA2-222ENST00000634403 BHMG1C9JSJ3 638 aaPredicted RBP8.7□□□□□ -1.02
SMARCA2-222ENST00000634403 LAPTM4BQ86VI4 370 aa8.7□□□□□ -1.02
SMARCA2-222ENST00000634403 PCMTD1Q96MG8 357 aaPredicted RBP8.7□□□□□ -1.02
SMARCA2-222ENST00000634403 TBC1D2Q9BYX2 928 aa8.7□□□□□ -1.02
SMARCA2-222ENST00000634403 MYSM1Q5VVJ2 828 aa8.69□□□□□ -1.02
SMARCA2-222ENST00000634403 SKIV2LQ15477 1246 aaKnown RBP8.68□□□□□ -1.02
SMARCA2-222ENST00000634403 ANKRD13DQ6ZTN6 518 aa8.68□□□□□ -1.02
SMARCA2-222ENST00000634403 SAMD7Q7Z3H4 446 aa8.68□□□□□ -1.02
SMARCA2-222ENST00000634403 MRPL50Q8N5N7 158 aaKnown RBP8.68□□□□□ -1.02
SMARCA2-222ENST00000634403 SPIRE2Q8WWL2 714 aa8.68□□□□□ -1.02
SMARCA2-222ENST00000634403 POLR3EQ9NVU0 708 aa8.68□□□□□ -1.02
SMARCA2-222ENST00000634403 HDGFP51858 240 aaKnown RBP8.67□□□□□ -1.02
SMARCA2-222ENST00000634403 WRNQ14191 1432 aaPredicted RBP eCLIP8.67□□□□□ -1.02
SMARCA2-222ENST00000634403 ZFRQ96KR1 1074 aaKnown RBP8.67□□□□□ -1.02
SMARCA2-222ENST00000634403 HRO43593 1189 aa8.66□□□□□ -1.02
SMARCA2-222ENST00000634403 RNF40O75150 1001 aa8.66□□□□□ -1.02
SMARCA2-222ENST00000634403 SLC10A3P09131 477 aa8.66□□□□□ -1.02
SMARCA2-222ENST00000634403 DIXDC1Q155Q3 683 aa8.66□□□□□ -1.02
SMARCA2-222ENST00000634403 NUTM1Q86Y26 1132 aa8.66□□□□□ -1.02
SMARCA2-222ENST00000634403 PROCA1Q8NCQ7 364 aaPredicted RBP8.66□□□□□ -1.02
SMARCA2-222ENST00000634403 CC2D2AQ9P2K1 1620 aa8.65□□□□□ -1.02
SMARCA2-222ENST00000634403 EEA1Q15075 1411 aa8.65□□□□□ -1.02
SMARCA2-222ENST00000634403 CLK2P49760 499 aaKnown RBP8.65□□□□□ -1.02
SMARCA2-222ENST00000634403 RSPH4AQ5TD94 716 aa8.65□□□□□ -1.02
SMARCA2-222ENST00000634403 SLF2Q8IX21 1173 aa8.65□□□□□ -1.02
SMARCA2-222ENST00000634403 FAM9AQ8IZU1 332 aaPredicted RBP8.65□□□□□ -1.02
SMARCA2-222ENST00000634403 ATP1B4Q9UN42 357 aaPredicted RBP8.65□□□□□ -1.02
SMARCA2-222ENST00000634403 GCGRP47871 477 aa8.64□□□□□ -1.03
SMARCA2-222ENST00000634403 SLC4A3P48751 1232 aa8.64□□□□□ -1.03
SMARCA2-222ENST00000634403 C14orf37Q86TY3 774 aa8.64□□□□□ -1.03
SMARCA2-222ENST00000634403 CFTRP13569 1480 aa8.64□□□□□ -1.03
SMARCA2-222ENST00000634403 KDM4AO75164 1064 aa8.63□□□□□ -1.03
SMARCA2-222ENST00000634403 KRTAP3-3Q9BYR6 98 aa8.63□□□□□ -1.03
SMARCA2-222ENST00000634403 KRTAP3-2Q9BYR7 98 aa8.63□□□□□ -1.03
SMARCA2-222ENST00000634403 LIMD1Q9UGP4 676 aa8.63□□□□□ -1.03
SMARCA2-222ENST00000634403 MOXD2PA6NHM9 499 aa8.62□□□□□ -1.03
SMARCA2-222ENST00000634403 ERICH6Q7L0X2 663 aa8.62□□□□□ -1.03
SMARCA2-222ENST00000634403 RIC3Q7Z5B4 369 aa8.62□□□□□ -1.03
SMARCA2-222ENST00000634403 LRCH3Q96II8 777 aa8.62□□□□□ -1.03
SMARCA2-222ENST00000634403 STAC3Q96MF2 364 aa8.62□□□□□ -1.03
SMARCA2-222ENST00000634403 SYNJ1O43426 1573 aa8.61□□□□□ -1.03
SMARCA2-222ENST00000634403 CFHP08603 1231 aa8.61□□□□□ -1.03
SMARCA2-222ENST00000634403 NDUFV2P19404 249 aa8.61□□□□□ -1.03
SMARCA2-222ENST00000634403 RSBN1LQ6PCB5 846 aaPredicted RBP8.61□□□□□ -1.03
SMARCA2-222ENST00000634403 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.61□□□□□ -1.03
SMARCA2-222ENST00000634403 GOLGA8CPA6NN73 597 aa8.6□□□□□ -1.03
SMARCA2-222ENST00000634403 SPTLC1O15269 473 aa8.6□□□□□ -1.03
SMARCA2-222ENST00000634403 ANKK1Q8NFD2 765 aa8.6□□□□□ -1.03
SMARCA2-222ENST00000634403 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.6□□□□□ -1.03
SMARCA2-222ENST00000634403 SOGA1O94964 1423 aa8.6□□□□□ -1.03
SMARCA2-222ENST00000634403 TOP2BQ02880 1626 aa8.59□□□□□ -1.03
SMARCA2-222ENST00000634403 HOXA2O43364 376 aa8.59□□□□□ -1.03
SMARCA2-222ENST00000634403 USP46P62068 366 aa8.59□□□□□ -1.03
SMARCA2-222ENST00000634403 CADPSQ9ULU8 1353 aa8.59□□□□□ -1.03
SMARCA2-222ENST00000634403 BIVM-ERCC5R4GMW8 1640 aa8.58□□□□□ -1.04
SMARCA2-222ENST00000634403 CSPP1Q1MSJ5 1256 aa8.58□□□□□ -1.04
SMARCA2-222ENST00000634403 PRDM2Q13029 1718 aa8.57□□□□□ -1.04
SMARCA2-222ENST00000634403 BCAMP50895 628 aa8.57□□□□□ -1.04
SMARCA2-222ENST00000634403 GUCA2AQ02747 115 aa8.57□□□□□ -1.04
SMARCA2-222ENST00000634403 FUT2Q10981 343 aa8.57□□□□□ -1.04
SMARCA2-222ENST00000634403 FBXO31Q5XUX0 539 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms