RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 CHGAP10645 457 aaKnown RBP23.89■■□□□ 1.41
SNRNP48-203ENST00000634363 MYO5BQ9ULV0 1848 aa23.89■■□□□ 1.41
SNRNP48-203ENST00000634363 HDGFP51858 240 aaKnown RBP23.87■■□□□ 1.41
SNRNP48-203ENST00000634363 RGS17Q9UGC6 210 aaPredicted RBP23.87■■□□□ 1.41
SNRNP48-203ENST00000634363 RPRD2Q5VT52 1461 aaKnown RBP23.85■■□□□ 1.41
SNRNP48-203ENST00000634363 ROBO1Q9Y6N7 1651 aa23.85■■□□□ 1.41
SNRNP48-203ENST00000634363 GCC2Q8IWJ2 1684 aa23.83■■□□□ 1.41
SNRNP48-203ENST00000634363 MSH6P52701 1360 aa23.83■■□□□ 1.41
SNRNP48-203ENST00000634363 NUTM2DQ5VT03 806 aaPredicted RBP23.83■■□□□ 1.41
SNRNP48-203ENST00000634363 RIMS2Q9UQ26 1411 aa23.83■■□□□ 1.4
SNRNP48-203ENST00000634363 SLAIN2Q9P270 581 aa23.81■■□□□ 1.4
SNRNP48-203ENST00000634363 NKTRP30414 1462 aaKnown RBP23.81■■□□□ 1.4
SNRNP48-203ENST00000634363 ITGAEP38570 1179 aa23.8■■□□□ 1.4
SNRNP48-203ENST00000634363 PLEKHG1Q9ULL1 1385 aa23.79■■□□□ 1.4
SNRNP48-203ENST00000634363 NWD1Q149M9 1564 aa23.79■■□□□ 1.4
SNRNP48-203ENST00000634363 ZFYVE9O95405 1425 aa23.79■■□□□ 1.4
SNRNP48-203ENST00000634363 TMEM131LA2VDJ0 1609 aa23.79■■□□□ 1.4
SNRNP48-203ENST00000634363 CHD2O14647 1828 aaKnown RBP23.79■■□□□ 1.4
SNRNP48-203ENST00000634363 C14orf37Q86TY3 774 aa23.78■■□□□ 1.4
SNRNP48-203ENST00000634363 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.77■■□□□ 1.4
SNRNP48-203ENST00000634363 TBX22Q9Y458 520 aa23.76■■□□□ 1.39
SNRNP48-203ENST00000634363 POTEAQ6S8J7 498 aa23.75■■□□□ 1.39
SNRNP48-203ENST00000634363 E9PCH4 1651 aa23.75■■□□□ 1.39
SNRNP48-203ENST00000634363 UNC13BO14795 1591 aa23.74■■□□□ 1.39
SNRNP48-203ENST00000634363 PPARGC1BQ86YN6 1023 aaKnown RBP23.74■■□□□ 1.39
SNRNP48-203ENST00000634363 PHLPP1O60346 1717 aa23.73■■□□□ 1.39
SNRNP48-203ENST00000634363 NUP155O75694 1391 aa23.71■■□□□ 1.39
SNRNP48-203ENST00000634363 ROCK1Q13464 1354 aa23.69■■□□□ 1.38
SNRNP48-203ENST00000634363 IQGAP3Q86VI3 1631 aa23.67■■□□□ 1.38
SNRNP48-203ENST00000634363 ATF3P18847 181 aa23.66■■□□□ 1.38
SNRNP48-203ENST00000634363 ADAMTS13Q76LX8 1427 aa23.66■■□□□ 1.38
SNRNP48-203ENST00000634363 JCADQ9P266 1359 aa23.65■■□□□ 1.38
SNRNP48-203ENST00000634363 C19orf44Q9H6X5 657 aa23.65■■□□□ 1.38
SNRNP48-203ENST00000634363 CADPS2Q86UW7 1296 aa23.64■■□□□ 1.37
SNRNP48-203ENST00000634363 AMOTL2Q9Y2J4 779 aa23.64■■□□□ 1.37
SNRNP48-203ENST00000634363 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.63■■□□□ 1.37
SNRNP48-203ENST00000634363 NCOA3Q9Y6Q9 1424 aa23.63■■□□□ 1.37
SNRNP48-203ENST00000634363 ZNF326Q5BKZ1 582 aaKnown RBP23.61■■□□□ 1.37
SNRNP48-203ENST00000634363 DIP2AQ14689 1571 aa23.61■■□□□ 1.37
SNRNP48-203ENST00000634363 MEX3CQ5U5Q3 659 aaKnown RBP23.6■■□□□ 1.37
SNRNP48-203ENST00000634363 PIK3R4Q99570 1358 aa23.6■■□□□ 1.37
SNRNP48-203ENST00000634363 COL16A1Q07092 1604 aaPredicted RBP23.59■■□□□ 1.37
SNRNP48-203ENST00000634363 TRPM2O94759 1503 aa23.59■■□□□ 1.37
SNRNP48-203ENST00000634363 PTPRUQ92729 1446 aa23.57■■□□□ 1.36
SNRNP48-203ENST00000634363 SPATA31A6Q5VVP1 1343 aa23.54■■□□□ 1.36
SNRNP48-203ENST00000634363 SPHKAPQ2M3C7 1700 aa23.53■■□□□ 1.36
SNRNP48-203ENST00000634363 NUTM2BA6NNL0 878 aaPredicted RBP23.52■■□□□ 1.36
SNRNP48-203ENST00000634363 NUTM2EB1AL46 878 aaPredicted RBP23.52■■□□□ 1.36
SNRNP48-203ENST00000634363 BRINP3Q76B58 766 aa23.52■■□□□ 1.36
SNRNP48-203ENST00000634363 NUTM2AQ8IVF1 878 aaPredicted RBP23.52■■□□□ 1.36
SNRNP48-203ENST00000634363 SETD1AO15047 1707 aaKnown RBP23.52■■□□□ 1.36
SNRNP48-203ENST00000634363 LRP6O75581 1613 aa23.51■■□□□ 1.35
SNRNP48-203ENST00000634363 AHDC1Q5TGY3 1603 aaPredicted RBP23.49■■□□□ 1.35
SNRNP48-203ENST00000634363 ZNF772Q68DY9 489 aaPredicted RBP23.49■■□□□ 1.35
SNRNP48-203ENST00000634363 NRXN3Q9Y4C0 1643 aa23.48■■□□□ 1.35
SNRNP48-203ENST00000634363 TRIM52Q96A61 297 aa23.48■■□□□ 1.35
SNRNP48-203ENST00000634363 METP08581 1390 aa23.47■■□□□ 1.35
SNRNP48-203ENST00000634363 SHPRHQ149N8 1683 aa23.46■■□□□ 1.35
SNRNP48-203ENST00000634363 SETBP1Q9Y6X0 1596 aa23.45■■□□□ 1.34
SNRNP48-203ENST00000634363 RRBP1Q9P2E9 1410 aaKnown RBP23.45■■□□□ 1.34
SNRNP48-203ENST00000634363 XRN1Q8IZH2 1706 aaKnown RBP23.45■■□□□ 1.34
SNRNP48-203ENST00000634363 DCCP43146 1447 aa23.42■■□□□ 1.34
SNRNP48-203ENST00000634363 CLTCL1P53675 1640 aa23.42■■□□□ 1.34
SNRNP48-203ENST00000634363 DDX17Q92841 729 aaKnown RBP23.42■■□□□ 1.34
SNRNP48-203ENST00000634363 KIF1BO60333 1816 aa23.41■■□□□ 1.34
SNRNP48-203ENST00000634363 ASXL1Q8IXJ9 1541 aa23.41■■□□□ 1.34
SNRNP48-203ENST00000634363 MST1RQ04912 1400 aa23.41■■□□□ 1.34
SNRNP48-203ENST00000634363 RXRBP28702 533 aa23.4■■□□□ 1.34
SNRNP48-203ENST00000634363 LRRC59Q96AG4 307 aaKnown RBP23.4■■□□□ 1.34
SNRNP48-203ENST00000634363 NEXMIFQ5QGS0 1516 aa23.38■■□□□ 1.33
SNRNP48-203ENST00000634363 NAIPQ13075 1403 aa23.36■■□□□ 1.33
SNRNP48-203ENST00000634363 VGFO15240 615 aaPredicted RBP23.36■■□□□ 1.33
SNRNP48-203ENST00000634363 AFF2P51816 1311 aa23.35■■□□□ 1.33
SNRNP48-203ENST00000634363 SETD5Q9C0A6 1442 aa23.35■■□□□ 1.33
SNRNP48-203ENST00000634363 ADGRL3Q9HAR2 1447 aa23.35■■□□□ 1.33
SNRNP48-203ENST00000634363 NHSL1Q5SYE7 1610 aa23.34■■□□□ 1.33
SNRNP48-203ENST00000634363 NALCNQ8IZF0 1738 aa23.34■■□□□ 1.33
SNRNP48-203ENST00000634363 UPF1Q92900 1129 aaKnown RBP eCLIP23.34■■□□□ 1.33
SNRNP48-203ENST00000634363 C8orf37Q96NL8 207 aa23.34■■□□□ 1.33
SNRNP48-203ENST00000634363 SLC4A1APQ9BWU0 796 aaKnown RBP23.32■■□□□ 1.32
SNRNP48-203ENST00000634363 ORAI2Q96SN7 254 aa23.29■■□□□ 1.32
SNRNP48-203ENST00000634363 QTRT2Q9H974 415 aaKnown RBP23.29■■□□□ 1.32
SNRNP48-203ENST00000634363 ADAMTS2O95450 1211 aa23.28■■□□□ 1.32
SNRNP48-203ENST00000634363 PNPLA6Q8IY17 1366 aa23.27■■□□□ 1.32
SNRNP48-203ENST00000634363 NGLY1Q96IV0 654 aa23.27■■□□□ 1.32
SNRNP48-203ENST00000634363 C1orf167Q5SNV9 1468 aa23.27■■□□□ 1.32
SNRNP48-203ENST00000634363 ROBO2Q9HCK4 1378 aa23.27■■□□□ 1.31
SNRNP48-203ENST00000634363 RPGRIP1LQ68CZ1 1315 aa23.26■■□□□ 1.31
SNRNP48-203ENST00000634363 FOXD1Q16676 465 aa23.25■■□□□ 1.31
SNRNP48-203ENST00000634363 RBM6P78332 1123 aaKnown RBP23.22■■□□□ 1.31
SNRNP48-203ENST00000634363 HFM1A2PYH4 1435 aa23.22■■□□□ 1.31
SNRNP48-203ENST00000634363 PTCH1Q13635 1447 aa23.22■■□□□ 1.31
SNRNP48-203ENST00000634363 CDK12Q9NYV4 1490 aaPredicted RBP23.21■■□□□ 1.31
SNRNP48-203ENST00000634363 PPLO60437 1756 aa23.2■■□□□ 1.3
SNRNP48-203ENST00000634363 RGL3Q3MIN7 710 aa23.2■■□□□ 1.3
SNRNP48-203ENST00000634363 SOS2Q07890 1332 aaPredicted RBP23.19■■□□□ 1.3
SNRNP48-203ENST00000634363 ESCO1Q5FWF5 840 aa23.19■■□□□ 1.3
SNRNP48-203ENST00000634363 STK26Q9P289 416 aa23.18■■□□□ 1.3
SNRNP48-203ENST00000634363 USP21Q9UK80 565 aa23.16■■□□□ 1.3
SNRNP48-203ENST00000634363 ADGRF5Q8IZF2 1346 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms