RNA–Protein interactions for RNA: ENST00000633225.1

SKIDA1-204, Transcript of SKI/DACH domain containing 1, humanhuman

TSL 1 (best)

Gene SKIDA1, Length 1,452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-204ENST00000633225 PPLO60437 1756 aa28.08■■■□□ 2.09
SKIDA1-204ENST00000633225 NCKAP5LQ9HCH0 1330 aa28.07■■■□□ 2.08
SKIDA1-204ENST00000633225 ZNF326Q5BKZ1 582 aaKnown RBP28.07■■■□□ 2.08
SKIDA1-204ENST00000633225 RGL3Q3MIN7 710 aa28.06■■■□□ 2.08
SKIDA1-204ENST00000633225 MED14O60244 1454 aa28.04■■■□□ 2.08
SKIDA1-204ENST00000633225 NUTM2DQ5VT03 806 aaPredicted RBP28.04■■■□□ 2.08
SKIDA1-204ENST00000633225 TXNDC2Q86VQ3 553 aa28.04■■■□□ 2.08
SKIDA1-204ENST00000633225 ANKLE2Q86XL3 938 aa28.04■■■□□ 2.08
SKIDA1-204ENST00000633225 IQGAP1P46940 1657 aa28■■■□□ 2.07
SKIDA1-204ENST00000633225 NEUROD1Q13562 356 aa28■■■□□ 2.07
SKIDA1-204ENST00000633225 CCER1Q8TC90 406 aaPredicted RBP28■■■□□ 2.07
SKIDA1-204ENST00000633225 EID1Q9Y6B2 187 aa28■■■□□ 2.07
SKIDA1-204ENST00000633225 RPGRIP1LQ68CZ1 1315 aa28■■■□□ 2.07
SKIDA1-204ENST00000633225 NPHP4O75161 1426 aaPredicted RBP27.99■■■□□ 2.07
SKIDA1-204ENST00000633225 CLSPNQ9HAW4 1339 aa27.99■■■□□ 2.07
SKIDA1-204ENST00000633225 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.97■■■□□ 2.07
SKIDA1-204ENST00000633225 PLEKHG1Q9ULL1 1385 aa27.97■■■□□ 2.07
SKIDA1-204ENST00000633225 NRXN3Q9Y4C0 1643 aa27.96■■■□□ 2.07
SKIDA1-204ENST00000633225 MYOM2P54296 1465 aa27.95■■■□□ 2.06
SKIDA1-204ENST00000633225 PPP1R15AO75807 674 aaPredicted RBP27.94■■■□□ 2.06
SKIDA1-204ENST00000633225 HDGFP51858 240 aaKnown RBP27.93■■■□□ 2.06
SKIDA1-204ENST00000633225 SETBP1Q9Y6X0 1596 aa27.93■■■□□ 2.06
SKIDA1-204ENST00000633225 ADGRF5Q8IZF2 1346 aa27.92■■■□□ 2.06
SKIDA1-204ENST00000633225 SENP3Q9H4L4 574 aaPredicted RBP27.92■■■□□ 2.06
SKIDA1-204ENST00000633225 NRXN1Q9ULB1 1477 aa27.92■■■□□ 2.06
SKIDA1-204ENST00000633225 ADAMTS13Q76LX8 1427 aa27.9■■■□□ 2.06
SKIDA1-204ENST00000633225 VGFO15240 615 aaPredicted RBP27.89■■■□□ 2.06
SKIDA1-204ENST00000633225 DCAF11Q8TEB1 546 aa27.89■■■□□ 2.05
SKIDA1-204ENST00000633225 L3MBTL2Q969R5 705 aa27.89■■■□□ 2.05
SKIDA1-204ENST00000633225 PIK3C2GO75747 1445 aa27.88■■■□□ 2.05
SKIDA1-204ENST00000633225 SETD1AO15047 1707 aaKnown RBP27.87■■■□□ 2.05
SKIDA1-204ENST00000633225 DIP2AQ14689 1571 aa27.84■■■□□ 2.05
SKIDA1-204ENST00000633225 KDM2AQ9Y2K7 1162 aa27.84■■■□□ 2.05
SKIDA1-204ENST00000633225 DMRT2Q9Y5R5 561 aa27.84■■■□□ 2.05
SKIDA1-204ENST00000633225 TONSLQ96HA7 1378 aa27.84■■■□□ 2.05
SKIDA1-204ENST00000633225 SLC26A8Q96RN1 970 aa27.83■■■□□ 2.04
SKIDA1-204ENST00000633225 ALKQ9UM73 1620 aa27.82■■■□□ 2.04
SKIDA1-204ENST00000633225 BCANQ96GW7 911 aa27.8■■■□□ 2.04
SKIDA1-204ENST00000633225 PRAG1Q86YV5 1406 aa27.79■■■□□ 2.04
SKIDA1-204ENST00000633225 STAC3Q96MF2 364 aa27.78■■■□□ 2.04
SKIDA1-204ENST00000633225 ASXL1Q8IXJ9 1541 aa27.77■■■□□ 2.04
SKIDA1-204ENST00000633225 TBX22Q9Y458 520 aa27.76■■■□□ 2.04
SKIDA1-204ENST00000633225 STRCP1A6NGW2 1772 aa27.76■■■□□ 2.03
SKIDA1-204ENST00000633225 LAMC1P11047 1609 aa27.75■■■□□ 2.03
SKIDA1-204ENST00000633225 METP08581 1390 aa27.75■■■□□ 2.03
SKIDA1-204ENST00000633225 ZNF335Q9H4Z2 1342 aaPredicted RBP27.73■■■□□ 2.03
SKIDA1-204ENST00000633225 PTPRUQ92729 1446 aa27.73■■■□□ 2.03
SKIDA1-204ENST00000633225 NWD1Q149M9 1564 aa27.72■■■□□ 2.03
SKIDA1-204ENST00000633225 CFAP70Q5T0N1 1121 aa27.72■■■□□ 2.03
SKIDA1-204ENST00000633225 CHD2O14647 1828 aaKnown RBP27.72■■■□□ 2.03
SKIDA1-204ENST00000633225 C14orf93Q9H972 538 aaKnown RBP27.71■■■□□ 2.03
SKIDA1-204ENST00000633225 ADGRB1O14514 1584 aa27.7■■■□□ 2.02
SKIDA1-204ENST00000633225 LTBP4Q8N2S1 1624 aa27.69■■■□□ 2.02
SKIDA1-204ENST00000633225 XRN1Q8IZH2 1706 aaKnown RBP27.69■■■□□ 2.02
SKIDA1-204ENST00000633225 KIAA1210Q9ULL0 1709 aa27.69■■■□□ 2.02
SKIDA1-204ENST00000633225 NBPF8Q3BBV2 869 aa27.69■■■□□ 2.02
SKIDA1-204ENST00000633225 PIK3R4Q99570 1358 aa27.69■■■□□ 2.02
SKIDA1-204ENST00000633225 TRPM1Q7Z4N2 1603 aa27.68■■■□□ 2.02
SKIDA1-204ENST00000633225 TIMELESSQ9UNS1 1208 aa27.68■■■□□ 2.02
SKIDA1-204ENST00000633225 TMEM132EQ6IEE7 984 aa27.64■■■□□ 2.01
SKIDA1-204ENST00000633225 KCNA6P17658 529 aa27.63■■■□□ 2.01
SKIDA1-204ENST00000633225 NKTRP30414 1462 aaKnown RBP27.61■■■□□ 2.01
SKIDA1-204ENST00000633225 KNDC1Q76NI1 1749 aa27.6■■■□□ 2.01
SKIDA1-204ENST00000633225 NBPF1Q3BBV0 1214 aa27.6■■■□□ 2.01
SKIDA1-204ENST00000633225 YTHDC2Q9H6S0 1430 aaKnown RBP27.6■■■□□ 2.01
SKIDA1-204ENST00000633225 CPS1P31327 1500 aa27.59■■■□□ 2.01
SKIDA1-204ENST00000633225 AMOTL2Q9Y2J4 779 aa27.59■■■□□ 2.01
SKIDA1-204ENST00000633225 LRPPRCP42704 1394 aaKnown RBP27.58■■■□□ 2.01
SKIDA1-204ENST00000633225 RALGAPBQ86X10 1494 aa27.58■■■□□ 2.01
SKIDA1-204ENST00000633225 TECPR2O15040 1411 aa27.57■■■□□ 2
SKIDA1-204ENST00000633225 LRRC7Q96NW7 1537 aa27.56■■■□□ 2
SKIDA1-204ENST00000633225 PTCH1Q13635 1447 aa27.55■■■□□ 2
SKIDA1-204ENST00000633225 ROBO2Q9HCK4 1378 aa27.54■■■□□ 2
SKIDA1-204ENST00000633225 XIRP1Q702N8 1843 aaKnown RBP27.54■■■□□ 2
SKIDA1-204ENST00000633225 ABCC11Q96J66 1382 aa27.53■■■□□ 2
SKIDA1-204ENST00000633225 GPRASP1Q5JY77 1395 aa27.52■■■□□ 2
SKIDA1-204ENST00000633225 STK26Q9P289 416 aa27.52■■■□□ 2
SKIDA1-204ENST00000633225 ROCK2O75116 1388 aaKnown RBP27.52■■■□□ 2
SKIDA1-204ENST00000633225 DLC1Q96QB1 1528 aa27.5■■□□□ 1.99
SKIDA1-204ENST00000633225 ARHGEF28Q8N1W1 1705 aaKnown RBP27.5■■□□□ 1.99
SKIDA1-204ENST00000633225 RBM33Q96EV2 1170 aaKnown RBP27.49■■□□□ 1.99
SKIDA1-204ENST00000633225 TMEM94Q12767 1356 aa27.48■■□□□ 1.99
SKIDA1-204ENST00000633225 PROSER2Q86WR7 435 aaPredicted RBP27.46■■□□□ 1.99
SKIDA1-204ENST00000633225 PLEKHH1Q9ULM0 1364 aa27.46■■□□□ 1.99
SKIDA1-204ENST00000633225 TRAK1Q9UPV9 953 aa27.45■■□□□ 1.99
SKIDA1-204ENST00000633225 FAM135BQ49AJ0 1406 aa27.44■■□□□ 1.98
SKIDA1-204ENST00000633225 NALCNQ8IZF0 1738 aa27.43■■□□□ 1.98
SKIDA1-204ENST00000633225 WAPLQ7Z5K2 1190 aa27.42■■□□□ 1.98
SKIDA1-204ENST00000633225 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.41■■□□□ 1.98
SKIDA1-204ENST00000633225 SIRT1Q96EB6 747 aa27.4■■□□□ 1.98
SKIDA1-204ENST00000633225 NCOA3Q9Y6Q9 1424 aa27.39■■□□□ 1.98
SKIDA1-204ENST00000633225 CERKQ8TCT0 537 aa27.39■■□□□ 1.98
SKIDA1-204ENST00000633225 PRAM1Q96QH2 718 aa27.39■■□□□ 1.98
SKIDA1-204ENST00000633225 CARD11Q9BXL7 1154 aa27.39■■□□□ 1.98
SKIDA1-204ENST00000633225 IQSEC2Q5JU85 1478 aa27.38■■□□□ 1.97
SKIDA1-204ENST00000633225 ADGRL3Q9HAR2 1447 aa27.37■■□□□ 1.97
SKIDA1-204ENST00000633225 SAFB2Q14151 953 aaKnown RBP eCLIP27.33■■□□□ 1.97
SKIDA1-204ENST00000633225 QRICH2Q9H0J4 1663 aa27.33■■□□□ 1.96
SKIDA1-204ENST00000633225 POGKQ9P215 609 aa27.31■■□□□ 1.96
SKIDA1-204ENST00000633225 ADGRB2O60241 1585 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms