RNA–Protein interactions for RNA: ENST00000631210.1

MECP2-220, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-220ENST00000631210 HSPA2P54652 639 aa12.11□□□□□ -0.47
MECP2-220ENST00000631210 RPGRIP1LQ68CZ1 1315 aa12.11□□□□□ -0.47
MECP2-220ENST00000631210 THEMISQ8N1K5 641 aaPredicted RBP12.1□□□□□ -0.47
MECP2-220ENST00000631210 STRCQ7RTU9 1775 aa12.1□□□□□ -0.47
MECP2-220ENST00000631210 ADGRF5Q8IZF2 1346 aa12.1□□□□□ -0.47
MECP2-220ENST00000631210 MYOM2P54296 1465 aa12.09□□□□□ -0.47
MECP2-220ENST00000631210 NRXN3Q9Y4C0 1643 aa12.09□□□□□ -0.47
MECP2-220ENST00000631210 NUTM2DQ5VT03 806 aaPredicted RBP12.08□□□□□ -0.48
MECP2-220ENST00000631210 STAG3Q9UJ98 1225 aa12.08□□□□□ -0.48
MECP2-220ENST00000631210 TIMELESSQ9UNS1 1208 aa12.08□□□□□ -0.48
MECP2-220ENST00000631210 MED14O60244 1454 aa12.08□□□□□ -0.48
MECP2-220ENST00000631210 SCAF11Q99590 1463 aaKnown RBP12.08□□□□□ -0.48
MECP2-220ENST00000631210 NBPF8Q3BBV2 869 aa12.07□□□□□ -0.48
MECP2-220ENST00000631210 ZNF326Q5BKZ1 582 aaKnown RBP12.07□□□□□ -0.48
MECP2-220ENST00000631210 DCAF11Q8TEB1 546 aa12.07□□□□□ -0.48
MECP2-220ENST00000631210 TONSLQ96HA7 1378 aa12.06□□□□□ -0.48
MECP2-220ENST00000631210 SETD1AO15047 1707 aaKnown RBP12.06□□□□□ -0.48
MECP2-220ENST00000631210 POLR1AO95602 1720 aaPredicted RBP12.06□□□□□ -0.48
MECP2-220ENST00000631210 PIK3C2GO75747 1445 aa12.06□□□□□ -0.48
MECP2-220ENST00000631210 ADAMTS13Q76LX8 1427 aa12.06□□□□□ -0.48
MECP2-220ENST00000631210 PRAG1Q86YV5 1406 aa12.06□□□□□ -0.48
MECP2-220ENST00000631210 PPP1R15AO75807 674 aaPredicted RBP12.06□□□□□ -0.48
MECP2-220ENST00000631210 NCKAP5LQ9HCH0 1330 aa12.06□□□□□ -0.48
MECP2-220ENST00000631210 PLEKHG1Q9ULL1 1385 aa12.05□□□□□ -0.48
MECP2-220ENST00000631210 SETBP1Q9Y6X0 1596 aa12.05□□□□□ -0.48
MECP2-220ENST00000631210 TXNDC2Q86VQ3 553 aa12.05□□□□□ -0.48
MECP2-220ENST00000631210 KDM2AQ9Y2K7 1162 aa12.05□□□□□ -0.48
MECP2-220ENST00000631210 IQGAP1P46940 1657 aa12.05□□□□□ -0.48
MECP2-220ENST00000631210 ANKLE2Q86XL3 938 aa12.04□□□□□ -0.48
MECP2-220ENST00000631210 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.04□□□□□ -0.48
MECP2-220ENST00000631210 STAC3Q96MF2 364 aa12.04□□□□□ -0.48
MECP2-220ENST00000631210 ASXL1Q8IXJ9 1541 aa12.04□□□□□ -0.48
MECP2-220ENST00000631210 VGFO15240 615 aaPredicted RBP12.03□□□□□ -0.48
MECP2-220ENST00000631210 TRPM1Q7Z4N2 1603 aa12.02□□□□□ -0.49
MECP2-220ENST00000631210 ALKQ9UM73 1620 aa12.02□□□□□ -0.49
MECP2-220ENST00000631210 NPHP4O75161 1426 aaPredicted RBP12.02□□□□□ -0.49
MECP2-220ENST00000631210 ADGRB1O14514 1584 aa12.01□□□□□ -0.49
MECP2-220ENST00000631210 C14orf93Q9H972 538 aaKnown RBP12.01□□□□□ -0.49
MECP2-220ENST00000631210 EID1Q9Y6B2 187 aa12.01□□□□□ -0.49
MECP2-220ENST00000631210 KIAA1210Q9ULL0 1709 aa12□□□□□ -0.49
MECP2-220ENST00000631210 CFAP70Q5T0N1 1121 aa12□□□□□ -0.49
MECP2-220ENST00000631210 AEBP2Q6ZN18 517 aaPredicted RBP12□□□□□ -0.49
MECP2-220ENST00000631210 SENP3Q9H4L4 574 aaPredicted RBP12□□□□□ -0.49
MECP2-220ENST00000631210 HDGFP51858 240 aaKnown RBP11.99□□□□□ -0.49
MECP2-220ENST00000631210 NBPF1Q3BBV0 1214 aa11.99□□□□□ -0.49
MECP2-220ENST00000631210 METP08581 1390 aa11.99□□□□□ -0.49
MECP2-220ENST00000631210 RALGAPBQ86X10 1494 aa11.98□□□□□ -0.49
MECP2-220ENST00000631210 PTPRUQ92729 1446 aa11.98□□□□□ -0.49
MECP2-220ENST00000631210 GPRASP1Q5JY77 1395 aa11.98□□□□□ -0.49
MECP2-220ENST00000631210 SLC26A8Q96RN1 970 aa11.98□□□□□ -0.49
MECP2-220ENST00000631210 TBX22Q9Y458 520 aa11.98□□□□□ -0.49
MECP2-220ENST00000631210 LAMC1P11047 1609 aa11.97□□□□□ -0.49
MECP2-220ENST00000631210 DIP2AQ14689 1571 aa11.97□□□□□ -0.49
MECP2-220ENST00000631210 STRCP1A6NGW2 1772 aa11.96□□□□□ -0.49
MECP2-220ENST00000631210 CHD2O14647 1828 aaKnown RBP11.95□□□□□ -0.5
MECP2-220ENST00000631210 TMEM132EQ6IEE7 984 aa11.95□□□□□ -0.5
MECP2-220ENST00000631210 XRN1Q8IZH2 1706 aaKnown RBP11.94□□□□□ -0.5
MECP2-220ENST00000631210 NWD1Q149M9 1564 aa11.93□□□□□ -0.5
MECP2-220ENST00000631210 TECPR2O15040 1411 aa11.93□□□□□ -0.5
MECP2-220ENST00000631210 PIK3R4Q99570 1358 aa11.92□□□□□ -0.5
MECP2-220ENST00000631210 YTHDC2Q9H6S0 1430 aaKnown RBP11.92□□□□□ -0.5
MECP2-220ENST00000631210 LRPPRCP42704 1394 aaKnown RBP11.92□□□□□ -0.5
MECP2-220ENST00000631210 ABCC11Q96J66 1382 aa11.92□□□□□ -0.5
MECP2-220ENST00000631210 KNDC1Q76NI1 1749 aa11.91□□□□□ -0.5
MECP2-220ENST00000631210 ZEB1P37275 1124 aaPredicted RBP11.91□□□□□ -0.5
MECP2-220ENST00000631210 ROCK2O75116 1388 aaKnown RBP11.91□□□□□ -0.5
MECP2-220ENST00000631210 ARHGEF28Q8N1W1 1705 aaKnown RBP11.9□□□□□ -0.5
MECP2-220ENST00000631210 BCANQ96GW7 911 aa11.9□□□□□ -0.5
MECP2-220ENST00000631210 CPS1P31327 1500 aa11.9□□□□□ -0.5
MECP2-220ENST00000631210 DLC1Q96QB1 1528 aa11.9□□□□□ -0.5
MECP2-220ENST00000631210 ROBO2Q9HCK4 1378 aa11.89□□□□□ -0.51
MECP2-220ENST00000631210 LTBP4Q8N2S1 1624 aa11.89□□□□□ -0.51
MECP2-220ENST00000631210 ZNF335Q9H4Z2 1342 aaPredicted RBP11.88□□□□□ -0.51
MECP2-220ENST00000631210 KCNA6P17658 529 aa11.88□□□□□ -0.51
MECP2-220ENST00000631210 AMOTL2Q9Y2J4 779 aa11.88□□□□□ -0.51
MECP2-220ENST00000631210 DMRT2Q9Y5R5 561 aa11.88□□□□□ -0.51
MECP2-220ENST00000631210 PLEKHH1Q9ULM0 1364 aa11.88□□□□□ -0.51
MECP2-220ENST00000631210 PTCH1Q13635 1447 aa11.87□□□□□ -0.51
MECP2-220ENST00000631210 CARD11Q9BXL7 1154 aa11.87□□□□□ -0.51
MECP2-220ENST00000631210 STK26Q9P289 416 aa11.87□□□□□ -0.51
MECP2-220ENST00000631210 XIRP1Q702N8 1843 aaKnown RBP11.86□□□□□ -0.51
MECP2-220ENST00000631210 SIRT1Q96EB6 747 aa11.86□□□□□ -0.51
MECP2-220ENST00000631210 TRAK1Q9UPV9 953 aa11.86□□□□□ -0.51
MECP2-220ENST00000631210 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.86□□□□□ -0.51
MECP2-220ENST00000631210 FAM135BQ49AJ0 1406 aa11.86□□□□□ -0.51
MECP2-220ENST00000631210 NKTRP30414 1462 aaKnown RBP11.85□□□□□ -0.51
MECP2-220ENST00000631210 USP47Q96K76 1375 aa11.85□□□□□ -0.51
MECP2-220ENST00000631210 WAPLQ7Z5K2 1190 aa11.85□□□□□ -0.51
MECP2-220ENST00000631210 LRRC7Q96NW7 1537 aa11.84□□□□□ -0.51
MECP2-220ENST00000631210 PRAM1Q96QH2 718 aa11.83□□□□□ -0.52
MECP2-220ENST00000631210 TESK2Q96S53 571 aa11.83□□□□□ -0.52
MECP2-220ENST00000631210 HSPA5P11021 654 aaKnown RBP11.82□□□□□ -0.52
MECP2-220ENST00000631210 RBM33Q96EV2 1170 aaKnown RBP11.82□□□□□ -0.52
MECP2-220ENST00000631210 NALCNQ8IZF0 1738 aa11.82□□□□□ -0.52
MECP2-220ENST00000631210 QRICH2Q9H0J4 1663 aa11.81□□□□□ -0.52
MECP2-220ENST00000631210 ST20-MTHFSA0A0A6YYL1 179 aa11.81□□□□□ -0.52
MECP2-220ENST00000631210 TMEM94Q12767 1356 aa11.8□□□□□ -0.52
MECP2-220ENST00000631210 SBNO2Q9Y2G9 1366 aa11.8□□□□□ -0.52
MECP2-220ENST00000631210 CENPJQ9HC77 1338 aaPredicted RBP11.8□□□□□ -0.52
MECP2-220ENST00000631210 TULP4Q9NRJ4 1543 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms