RNA–Protein interactions for RNA: ENST00000631025.2

SOX2-OT-259, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 954 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-259ENST00000631025 NAIPQ13075 1403 aa20.95■□□□□ 0.94
SOX2-OT-259ENST00000631025 E9PCH4 1651 aa20.94■□□□□ 0.94
SOX2-OT-259ENST00000631025 FOXD4L1Q9NU39 408 aa20.94■□□□□ 0.94
SOX2-OT-259ENST00000631025 UBAP1LF5GYI3 381 aa20.93■□□□□ 0.94
SOX2-OT-259ENST00000631025 ZBTB22O15209 634 aa20.93■□□□□ 0.94
SOX2-OT-259ENST00000631025 CPS1P31327 1500 aa20.91■□□□□ 0.94
SOX2-OT-259ENST00000631025 GCC2Q8IWJ2 1684 aa20.91■□□□□ 0.94
SOX2-OT-259ENST00000631025 SLC52A1Q9NWF4 448 aa20.91■□□□□ 0.94
SOX2-OT-259ENST00000631025 EID1Q9Y6B2 187 aa20.91■□□□□ 0.94
SOX2-OT-259ENST00000631025 STRCP1A6NGW2 1772 aa20.9■□□□□ 0.94
SOX2-OT-259ENST00000631025 CHGAP10645 457 aaKnown RBP20.88■□□□□ 0.93
SOX2-OT-259ENST00000631025 SLC26A8Q96RN1 970 aa20.88■□□□□ 0.93
SOX2-OT-259ENST00000631025 ZFYVE9O95405 1425 aa20.87■□□□□ 0.93
SOX2-OT-259ENST00000631025 NUTM2DQ5VT03 806 aaPredicted RBP20.87■□□□□ 0.93
SOX2-OT-259ENST00000631025 LRRC7Q96NW7 1537 aa20.87■□□□□ 0.93
SOX2-OT-259ENST00000631025 KDM5AP29375 1690 aaKnown RBP20.86■□□□□ 0.93
SOX2-OT-259ENST00000631025 HFM1A2PYH4 1435 aa20.86■□□□□ 0.93
SOX2-OT-259ENST00000631025 TMEM131LA2VDJ0 1609 aa20.86■□□□□ 0.93
SOX2-OT-259ENST00000631025 RIMS2Q9UQ26 1411 aa20.85■□□□□ 0.93
SOX2-OT-259ENST00000631025 ALKQ9UM73 1620 aa20.84■□□□□ 0.93
SOX2-OT-259ENST00000631025 PIP4K2BP78356 416 aa20.83■□□□□ 0.93
SOX2-OT-259ENST00000631025 RBM33Q96EV2 1170 aaKnown RBP20.81■□□□□ 0.92
SOX2-OT-259ENST00000631025 MYO5BQ9ULV0 1848 aa20.81■□□□□ 0.92
SOX2-OT-259ENST00000631025 TRIM52Q96A61 297 aa20.79■□□□□ 0.92
SOX2-OT-259ENST00000631025 BCANQ96GW7 911 aa20.79■□□□□ 0.92
SOX2-OT-259ENST00000631025 PPP1R15AO75807 674 aaPredicted RBP20.78■□□□□ 0.92
SOX2-OT-259ENST00000631025 PLEKHG1Q9ULL1 1385 aa20.77■□□□□ 0.92
SOX2-OT-259ENST00000631025 RNF39Q9H2S5 420 aa20.75■□□□□ 0.91
SOX2-OT-259ENST00000631025 HSPA1LP34931 641 aa20.74■□□□□ 0.91
SOX2-OT-259ENST00000631025 TMEM94Q12767 1356 aa20.73■□□□□ 0.91
SOX2-OT-259ENST00000631025 SPHKAPQ2M3C7 1700 aa20.73■□□□□ 0.91
SOX2-OT-259ENST00000631025 ADAMTS13Q76LX8 1427 aa20.73■□□□□ 0.91
SOX2-OT-259ENST00000631025 TOM1O60784 492 aa20.73■□□□□ 0.91
SOX2-OT-259ENST00000631025 KCNA6P17658 529 aa20.73■□□□□ 0.91
SOX2-OT-259ENST00000631025 U3KPZ7 1027 aaPredicted RBP20.73■□□□□ 0.91
SOX2-OT-259ENST00000631025 CLTCL1P53675 1640 aa20.73■□□□□ 0.91
SOX2-OT-259ENST00000631025 TRPM2O94759 1503 aa20.71■□□□□ 0.91
SOX2-OT-259ENST00000631025 NWD1Q149M9 1564 aa20.69■□□□□ 0.9
SOX2-OT-259ENST00000631025 PROSER2Q86WR7 435 aaPredicted RBP20.69■□□□□ 0.9
SOX2-OT-259ENST00000631025 XIRP1Q702N8 1843 aaKnown RBP20.69■□□□□ 0.9
SOX2-OT-259ENST00000631025 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.68■□□□□ 0.9
SOX2-OT-259ENST00000631025 ZNF326Q5BKZ1 582 aaKnown RBP20.67■□□□□ 0.9
SOX2-OT-259ENST00000631025 NKTRP30414 1462 aaKnown RBP20.65■□□□□ 0.9
SOX2-OT-259ENST00000631025 DISP3Q9P2K9 1392 aa20.65■□□□□ 0.9
SOX2-OT-259ENST00000631025 MYCNP04198 464 aaPredicted RBP20.65■□□□□ 0.9
SOX2-OT-259ENST00000631025 HDGFP51858 240 aaKnown RBP20.65■□□□□ 0.9
SOX2-OT-259ENST00000631025 TBX22Q9Y458 520 aa20.65■□□□□ 0.9
SOX2-OT-259ENST00000631025 PTPRUQ92729 1446 aa20.64■□□□□ 0.89
SOX2-OT-259ENST00000631025 NRXN3Q9Y4C0 1643 aa20.63■□□□□ 0.89
SOX2-OT-259ENST00000631025 NEXMIFQ5QGS0 1516 aa20.63■□□□□ 0.89
SOX2-OT-259ENST00000631025 MPHOSPH9Q99550 1183 aa20.6■□□□□ 0.89
SOX2-OT-259ENST00000631025 SETD5Q9C0A6 1442 aa20.6■□□□□ 0.89
SOX2-OT-259ENST00000631025 METP08581 1390 aa20.59■□□□□ 0.89
SOX2-OT-259ENST00000631025 ILDR2Q71H61 639 aa20.59■□□□□ 0.89
SOX2-OT-259ENST00000631025 DIP2AQ14689 1571 aa20.58■□□□□ 0.88
SOX2-OT-259ENST00000631025 SETBP1Q9Y6X0 1596 aa20.58■□□□□ 0.88
SOX2-OT-259ENST00000631025 AMOTL2Q9Y2J4 779 aa20.57■□□□□ 0.88
SOX2-OT-259ENST00000631025 CHD2O14647 1828 aaKnown RBP20.57■□□□□ 0.88
SOX2-OT-259ENST00000631025 RAB3GAP2Q9H2M9 1393 aa20.57■□□□□ 0.88
SOX2-OT-259ENST00000631025 MSH6P52701 1360 aa20.54■□□□□ 0.88
SOX2-OT-259ENST00000631025 PIK3R4Q99570 1358 aa20.53■□□□□ 0.88
SOX2-OT-259ENST00000631025 C14orf37Q86TY3 774 aa20.51■□□□□ 0.87
SOX2-OT-259ENST00000631025 CCDC144AA2RUR9 1427 aa20.51■□□□□ 0.87
SOX2-OT-259ENST00000631025 FAM135BQ49AJ0 1406 aa20.51■□□□□ 0.87
SOX2-OT-259ENST00000631025 XRN1Q8IZH2 1706 aaKnown RBP20.5■□□□□ 0.87
SOX2-OT-259ENST00000631025 RGL3Q3MIN7 710 aa20.5■□□□□ 0.87
SOX2-OT-259ENST00000631025 SPATA31E1Q6ZUB1 1445 aa20.5■□□□□ 0.87
SOX2-OT-259ENST00000631025 MED1Q15648 1581 aaPredicted RBP20.5■□□□□ 0.87
SOX2-OT-259ENST00000631025 KIF1BO60333 1816 aa20.49■□□□□ 0.87
SOX2-OT-259ENST00000631025 C1QBPQ07021 282 aaKnown RBP20.49■□□□□ 0.87
SOX2-OT-259ENST00000631025 SLAIN2Q9P270 581 aa20.49■□□□□ 0.87
SOX2-OT-259ENST00000631025 ADGRF5Q8IZF2 1346 aa20.48■□□□□ 0.87
SOX2-OT-259ENST00000631025 ROBO1Q9Y6N7 1651 aa20.48■□□□□ 0.87
SOX2-OT-259ENST00000631025 VGFO15240 615 aaPredicted RBP20.45■□□□□ 0.86
SOX2-OT-259ENST00000631025 RPGRIP1LQ68CZ1 1315 aa20.45■□□□□ 0.86
SOX2-OT-259ENST00000631025 NCOA3Q9Y6Q9 1424 aa20.44■□□□□ 0.86
SOX2-OT-259ENST00000631025 C19orf44Q9H6X5 657 aa20.43■□□□□ 0.86
SOX2-OT-259ENST00000631025 SETD1AO15047 1707 aaKnown RBP20.43■□□□□ 0.86
SOX2-OT-259ENST00000631025 ROBO2Q9HCK4 1378 aa20.43■□□□□ 0.86
SOX2-OT-259ENST00000631025 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.42■□□□□ 0.86
SOX2-OT-259ENST00000631025 PPLO60437 1756 aa20.42■□□□□ 0.86
SOX2-OT-259ENST00000631025 ATF3P18847 181 aa20.39■□□□□ 0.85
SOX2-OT-259ENST00000631025 SAMD1Q6SPF0 538 aaPredicted RBP20.39■□□□□ 0.85
SOX2-OT-259ENST00000631025 CADPS2Q86UW7 1296 aa20.38■□□□□ 0.85
SOX2-OT-259ENST00000631025 ASXL1Q8IXJ9 1541 aa20.37■□□□□ 0.85
SOX2-OT-259ENST00000631025 ADGRL3Q9HAR2 1447 aa20.37■□□□□ 0.85
SOX2-OT-259ENST00000631025 MST1RQ04912 1400 aa20.36■□□□□ 0.85
SOX2-OT-259ENST00000631025 ANKRD30BQ9BXX2 1392 aa20.36■□□□□ 0.85
SOX2-OT-259ENST00000631025 PTCH1Q13635 1447 aa20.36■□□□□ 0.85
SOX2-OT-259ENST00000631025 TMEM132EQ6IEE7 984 aa20.35■□□□□ 0.85
SOX2-OT-259ENST00000631025 BRINP3Q76B58 766 aa20.35■□□□□ 0.85
SOX2-OT-259ENST00000631025 NALCNQ8IZF0 1738 aa20.35■□□□□ 0.85
SOX2-OT-259ENST00000631025 PIK3C2GO75747 1445 aa20.35■□□□□ 0.85
SOX2-OT-259ENST00000631025 IFT172Q9UG01 1749 aa20.34■□□□□ 0.85
SOX2-OT-259ENST00000631025 DDX17Q92841 729 aaKnown RBP20.34■□□□□ 0.85
SOX2-OT-259ENST00000631025 STK26Q9P289 416 aa20.34■□□□□ 0.85
SOX2-OT-259ENST00000631025 DCCP43146 1447 aa20.34■□□□□ 0.85
SOX2-OT-259ENST00000631025 COL16A1Q07092 1604 aaPredicted RBP20.33■□□□□ 0.84
SOX2-OT-259ENST00000631025 PHLPP1O60346 1717 aa20.31■□□□□ 0.84
SOX2-OT-259ENST00000631025 PRAG1Q86YV5 1406 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms