RNA–Protein interactions for RNA: ENST00000630499.2

SRRM2-231, Transcript of serine/arginine repetitive matrix 2, human

TSL 1 (best) BASIC

Gene SRRM2, Length 1,207 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-231	ENST00000630499	IQGAP3	Q86VI3	1631 aa		34.46	■■■■□ 3.11
SRRM2-231	ENST00000630499	TMEM94	Q12767	1356 aa		34.46	■■■■□ 3.11
SRRM2-231	ENST00000630499	SLC26A8	Q96RN1	970 aa		34.45	■■■■□ 3.11
SRRM2-231	ENST00000630499	NKTR	P30414	1462 aa	Known RBP	34.44	■■■■□ 3.1
SRRM2-231	ENST00000630499	FAM135B	Q49AJ0	1406 aa		34.42	■■■■□ 3.1
SRRM2-231	ENST00000630499	CHD2	O14647	1828 aa	Known RBP	34.41	■■■■□ 3.1
SRRM2-231	ENST00000630499	PLEKHG1	Q9ULL1	1385 aa		34.39	■■■■□ 3.1
SRRM2-231	ENST00000630499	RIMS2	Q9UQ26	1411 aa		34.38	■■■■□ 3.09
SRRM2-231	ENST00000630499	ROBO1	Q9Y6N7	1651 aa		34.35	■■■■□ 3.09
SRRM2-231	ENST00000630499	SENP3	Q9H4L4	574 aa	Predicted RBP	34.34	■■■■□ 3.09
SRRM2-231	ENST00000630499	PROSER2	Q86WR7	435 aa	Predicted RBP	34.31	■■■■□ 3.08
SRRM2-231	ENST00000630499	RBM33	Q96EV2	1170 aa	Known RBP	34.3	■■■■□ 3.08
SRRM2-231	ENST00000630499	ADAMTS13	Q76LX8	1427 aa		34.27	■■■■□ 3.08
SRRM2-231	ENST00000630499	DIP2A	Q14689	1571 aa		34.23	■■■■□ 3.07
SRRM2-231	ENST00000630499	PHF23	Q9BUL5	403 aa	Predicted RBP	34.23	■■■■□ 3.07
SRRM2-231	ENST00000630499	TBX22	Q9Y458	520 aa		34.23	■■■■□ 3.07
SRRM2-231	ENST00000630499	NUP155	O75694	1391 aa		34.23	■■■■□ 3.07
SRRM2-231	ENST00000630499	RGS17	Q9UGC6	210 aa	Predicted RBP	34.21	■■■■□ 3.07
SRRM2-231	ENST00000630499	HDGF	P51858	240 aa	Known RBP	34.2	■■■■□ 3.07
SRRM2-231	ENST00000630499	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	34.19	■■■■□ 3.06	1e-6	■□□□□ 8.6
SRRM2-231	ENST00000630499	MSH6	P52701	1360 aa		34.19	■■■■□ 3.06
SRRM2-231	ENST00000630499	PPP1R15A	O75807	674 aa	Predicted RBP	34.18	■■■■□ 3.06
SRRM2-231	ENST00000630499	BCAN	Q96GW7	911 aa		34.18	■■■■□ 3.06
SRRM2-231	ENST00000630499	SPHKAP	Q2M3C7	1700 aa		34.18	■■■■□ 3.06
SRRM2-231	ENST00000630499	NCOA3	Q9Y6Q9	1424 aa		34.17	■■■■□ 3.06
SRRM2-231	ENST00000630499	PIK3R4	Q99570	1358 aa		34.14	■■■■□ 3.06
SRRM2-231	ENST00000630499	NRXN3	Q9Y4C0	1643 aa		34.14	■■■■□ 3.06
SRRM2-231	ENST00000630499	CHGA	P10645	457 aa	Known RBP	34.13	■■■■□ 3.05
SRRM2-231	ENST00000630499	ITGAE	P38570	1179 aa		34.13	■■■■□ 3.05
SRRM2-231	ENST00000630499	PPARGC1B	Q86YN6	1023 aa	Known RBP	34.13	■■■■□ 3.05
SRRM2-231	ENST00000630499	SLAIN2	Q9P270	581 aa		34.12	■■■■□ 3.05
SRRM2-231	ENST00000630499	PHLPP1	O60346	1717 aa		34.11	■■■■□ 3.05
SRRM2-231	ENST00000630499	NUTM2D	Q5VT03	806 aa	Predicted RBP	34.11	■■■■□ 3.05
SRRM2-231	ENST00000630499	RRBP1	Q9P2E9	1410 aa	Known RBP	34.1	■■■■□ 3.05
SRRM2-231	ENST00000630499	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	34.1	■■■■□ 3.05
SRRM2-231	ENST00000630499	TRPM2	O94759	1503 aa		34.09	■■■■□ 3.05
SRRM2-231	ENST00000630499	PTPRU	Q92729	1446 aa		34.08	■■■■□ 3.05
SRRM2-231	ENST00000630499	COL16A1	Q07092	1604 aa	Predicted RBP	34.08	■■■■□ 3.05
SRRM2-231	ENST00000630499	SETBP1	Q9Y6X0	1596 aa		34.07	■■■■□ 3.05
SRRM2-231	ENST00000630499	XRN1	Q8IZH2	1706 aa	Known RBP	34.06	■■■■□ 3.04
SRRM2-231	ENST00000630499	CLTCL1	P53675	1640 aa		34.02	■■■■□ 3.04
SRRM2-231	ENST00000630499	NAIP	Q13075	1403 aa		34.01	■■■■□ 3.03
SRRM2-231	ENST00000630499	AHDC1	Q5TGY3	1603 aa	Predicted RBP	33.98	■■■■□ 3.03
SRRM2-231	ENST00000630499	NEXMIF	Q5QGS0	1516 aa		33.97	■■■■□ 3.03
SRRM2-231	ENST00000630499	C19orf44	Q9H6X5	657 aa		33.96	■■■■□ 3.03
SRRM2-231	ENST00000630499	JCAD	Q9P266	1359 aa		33.96	■■■■□ 3.03
SRRM2-231	ENST00000630499	AMOTL2	Q9Y2J4	779 aa		33.95	■■■■□ 3.03
SRRM2-231	ENST00000630499	POTEA	Q6S8J7	498 aa		33.94	■■■■□ 3.02
SRRM2-231	ENST00000630499	CADPS2	Q86UW7	1296 aa		33.92	■■■■□ 3.02
SRRM2-231	ENST00000630499	DCC	P43146	1447 aa		33.91	■■■■□ 3.02
SRRM2-231	ENST00000630499	MET	P08581	1390 aa		33.89	■■■■□ 3.02
SRRM2-231	ENST00000630499	KIF1B	O60333	1816 aa		33.89	■■■■□ 3.02
SRRM2-231	ENST00000630499	SHPRH	Q149N8	1683 aa		33.89	■■■■□ 3.02
SRRM2-231	ENST00000630499	LRP6	O75581	1613 aa		33.87	■■■■□ 3.01
SRRM2-231	ENST00000630499	C14orf37	Q86TY3	774 aa		33.87	■■■■□ 3.01
SRRM2-231	ENST00000630499	SETD1A	O15047	1707 aa	Known RBP	33.85	■■■■□ 3.01
SRRM2-231	ENST00000630499	HFM1	A2PYH4	1435 aa		33.85	■■■■□ 3.01
SRRM2-231	ENST00000630499	ATF3	P18847	181 aa		33.84	■■■■□ 3.01
SRRM2-231	ENST00000630499	MST1R	Q04912	1400 aa		33.81	■■■■□ 3
SRRM2-231	ENST00000630499	ZNF326	Q5BKZ1	582 aa	Known RBP	33.81	■■■■□ 3
SRRM2-231	ENST00000630499	BRINP3	Q76B58	766 aa		33.81	■■■■□ 3
SRRM2-231	ENST00000630499	NHSL1	Q5SYE7	1610 aa		33.8	■■■■□ 3
SRRM2-231	ENST00000630499	NALCN	Q8IZF0	1738 aa		33.8	■■■■□ 3
SRRM2-231	ENST00000630499	ASXL1	Q8IXJ9	1541 aa		33.79	■■■■□ 3
SRRM2-231	ENST00000630499	SPATA31A6	Q5VVP1	1343 aa		33.79	■■■■□ 3
SRRM2-231	ENST00000630499	ADGRL3	Q9HAR2	1447 aa		33.76	■■■□□ 2.99
SRRM2-231	ENST00000630499	PRAG1	Q86YV5	1406 aa		33.72	■■■□□ 2.99
SRRM2-231	ENST00000630499	PPL	O60437	1756 aa		33.71	■■■□□ 2.99
SRRM2-231	ENST00000630499	SETD5	Q9C0A6	1442 aa		33.7	■■■□□ 2.99
SRRM2-231	ENST00000630499	PTCH1	Q13635	1447 aa		33.69	■■■□□ 2.98
SRRM2-231	ENST00000630499	LAMC1	P11047	1609 aa		33.66	■■■□□ 2.98
SRRM2-231	ENST00000630499	TRIM52	Q96A61	297 aa		33.62	■■■□□ 2.97
SRRM2-231	ENST00000630499	ROBO2	Q9HCK4	1378 aa		33.61	■■■□□ 2.97
SRRM2-231	ENST00000630499	RPGRIP1L	Q68CZ1	1315 aa		33.61	■■■□□ 2.97
SRRM2-231	ENST00000630499	VGF	O15240	615 aa	Predicted RBP	33.61	■■■□□ 2.97
SRRM2-231	ENST00000630499	SLC4A1AP	Q9BWU0	796 aa	Known RBP	33.61	■■■□□ 2.97
SRRM2-231	ENST00000630499	C1orf167	Q5SNV9	1468 aa		33.58	■■■□□ 2.97
SRRM2-231	ENST00000630499	ZNF772	Q68DY9	489 aa	Predicted RBP	33.55	■■■□□ 2.96
SRRM2-231	ENST00000630499	IFT172	Q9UG01	1749 aa		33.55	■■■□□ 2.96
SRRM2-231	ENST00000630499	MEX3C	Q5U5Q3	659 aa	Known RBP	33.54	■■■□□ 2.96
SRRM2-231	ENST00000630499	DDX17	Q92841	729 aa	Known RBP	33.53	■■■□□ 2.96
SRRM2-231	ENST00000630499	PNPLA6	Q8IY17	1366 aa		33.52	■■■□□ 2.96
SRRM2-231	ENST00000630499	SPATA31E1	Q6ZUB1	1445 aa		33.52	■■■□□ 2.96
SRRM2-231	ENST00000630499	LRRC59	Q96AG4	307 aa	Known RBP	33.51	■■■□□ 2.95
SRRM2-231	ENST00000630499	FOXD1	Q16676	465 aa		33.5	■■■□□ 2.95
SRRM2-231	ENST00000630499	NUTM2B	A6NNL0	878 aa	Predicted RBP	33.47	■■■□□ 2.95
SRRM2-231	ENST00000630499	NUTM2E	B1AL46	878 aa	Predicted RBP	33.47	■■■□□ 2.95
SRRM2-231	ENST00000630499	NUTM2A	Q8IVF1	878 aa	Predicted RBP	33.47	■■■□□ 2.95
SRRM2-231	ENST00000630499	CDK12	Q9NYV4	1490 aa	Predicted RBP	33.45	■■■□□ 2.95
SRRM2-231	ENST00000630499	CDC42BPG	Q6DT37	1551 aa		33.45	■■■□□ 2.95
SRRM2-231	ENST00000630499	SOS2	Q07890	1332 aa	Predicted RBP	33.43	■■■□□ 2.94
SRRM2-231	ENST00000630499	ADGRF5	Q8IZF2	1346 aa		33.43	■■■□□ 2.94
SRRM2-231	ENST00000630499	CCDC144A	A2RUR9	1427 aa		33.43	■■■□□ 2.94
SRRM2-231	ENST00000630499	ORAI2	Q96SN7	254 aa		33.42	■■■□□ 2.94
SRRM2-231	ENST00000630499	AFF2	P51816	1311 aa		33.42	■■■□□ 2.94
SRRM2-231	ENST00000630499	TECPR2	O15040	1411 aa		33.42	■■■□□ 2.94
SRRM2-231	ENST00000630499	KNDC1	Q76NI1	1749 aa		33.39	■■■□□ 2.94
SRRM2-231	ENST00000630499	MPHOSPH9	Q99550	1183 aa		33.39	■■■□□ 2.94
SRRM2-231	ENST00000630499	COL22A1	Q8NFW1	1626 aa	Predicted RBP	33.39	■■■□□ 2.93
SRRM2-231	ENST00000630499	RXRB	P28702	533 aa		33.37	■■■□□ 2.93

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms