RNA–Protein interactions for RNA: ENST00000630319.2

TCF4-271, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-271ENST00000630319 TTLL12Q14166 644 aaPredicted RBP12.84□□□□□ -0.35
TCF4-271ENST00000630319 SWT1Q5T5J6 900 aaKnown RBP12.84□□□□□ -0.35
TCF4-271ENST00000630319 GIGYF2Q6Y7W6 1299 aaKnown RBP12.84□□□□□ -0.35
TCF4-271ENST00000630319 NEUROD2Q15784 382 aa12.83□□□□□ -0.36
TCF4-271ENST00000630319 KDM4CQ9H3R0 1056 aa12.83□□□□□ -0.36
TCF4-271ENST00000630319 SAMD7Q7Z3H4 446 aa12.82□□□□□ -0.36
TCF4-271ENST00000630319 FAM217BQ9NTX9 383 aaPredicted RBP12.82□□□□□ -0.36
TCF4-271ENST00000630319 MS4A1P11836 297 aa12.79□□□□□ -0.36
TCF4-271ENST00000630319 STAC3Q96MF2 364 aa12.79□□□□□ -0.36
TCF4-271ENST00000630319 SSTR3P32745 418 aaPredicted RBP12.77□□□□□ -0.37
TCF4-271ENST00000630319 SPNS2Q8IVW8 549 aa12.77□□□□□ -0.37
TCF4-271ENST00000630319 SOWAHBA6NEL2 793 aa12.76□□□□□ -0.37
TCF4-271ENST00000630319 ANKK1Q8NFD2 765 aa12.76□□□□□ -0.37
TCF4-271ENST00000630319 WNT2BQ93097 391 aa12.76□□□□□ -0.37
TCF4-271ENST00000630319 GOLGA8CPA6NN73 597 aa12.75□□□□□ -0.37
TCF4-271ENST00000630319 SLC10A3P09131 477 aa12.75□□□□□ -0.37
TCF4-271ENST00000630319 LRCH3Q96II8 777 aa12.75□□□□□ -0.37
TCF4-271ENST00000630319 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.75□□□□□ -0.37
TCF4-271ENST00000630319 CD46P15529 392 aa12.74□□□□□ -0.37
TCF4-271ENST00000630319 HDGFP51858 240 aaKnown RBP12.74□□□□□ -0.37
TCF4-271ENST00000630319 SULF1Q8IWU6 871 aa12.74□□□□□ -0.37
TCF4-271ENST00000630319 SLF2Q8IX21 1173 aa12.74□□□□□ -0.37
TCF4-271ENST00000630319 BCAMP50895 628 aa12.73□□□□□ -0.37
TCF4-271ENST00000630319 DDX11L8A8MPP1 907 aa12.72□□□□□ -0.37
TCF4-271ENST00000630319 THSD4Q6ZMP0 1018 aa12.72□□□□□ -0.37
TCF4-271ENST00000630319 FAM117AQ9C073 453 aa12.72□□□□□ -0.37
TCF4-271ENST00000630319 MYT1LQ9UL68 1186 aa12.72□□□□□ -0.37
TCF4-271ENST00000630319 PLEKHG3A1L390 1219 aa12.69□□□□□ -0.38
TCF4-271ENST00000630319 KCTD12Q96CX2 325 aaKnown RBP12.69□□□□□ -0.38
TCF4-271ENST00000630319 BEGAINQ9BUH8 593 aa12.68□□□□□ -0.38
TCF4-271ENST00000630319 TSR3Q9UJK0 312 aaKnown RBP12.67□□□□□ -0.38
TCF4-271ENST00000630319 HPS5Q9UPZ3 1129 aa12.67□□□□□ -0.38
TCF4-271ENST00000630319 GCGRP47871 477 aa12.66□□□□□ -0.38
TCF4-271ENST00000630319 SLC4A3P48751 1232 aa12.66□□□□□ -0.38
TCF4-271ENST00000630319 RDH13Q8NBN7 331 aa12.66□□□□□ -0.38
TCF4-271ENST00000630319 DDRGK1Q96HY6 314 aa12.66□□□□□ -0.38
TCF4-271ENST00000630319 RNF40O75150 1001 aa12.64□□□□□ -0.39
TCF4-271ENST00000630319 RSPH4AQ5TD94 716 aa12.64□□□□□ -0.39
TCF4-271ENST00000630319 WBP1LQ9NX94 342 aa12.64□□□□□ -0.39
TCF4-271ENST00000630319 NECTIN2Q92692 538 aa12.63□□□□□ -0.39
TCF4-271ENST00000630319 CFHP08603 1231 aa12.62□□□□□ -0.39
TCF4-271ENST00000630319 PPP4CP60510 307 aa12.62□□□□□ -0.39
TCF4-271ENST00000630319 IL27Q8NEV9 243 aa12.62□□□□□ -0.39
TCF4-271ENST00000630319 RNF166Q96A37 237 aaPredicted RBP12.62□□□□□ -0.39
TCF4-271ENST00000630319 MMRN1Q13201 1228 aa12.61□□□□□ -0.39
TCF4-271ENST00000630319 APLP1P51693 650 aa12.6□□□□□ -0.39
TCF4-271ENST00000630319 SPIRE2Q8WWL2 714 aa12.6□□□□□ -0.39
TCF4-271ENST00000630319 ACTN4O43707 911 aaKnown RBP12.58□□□□□ -0.4
TCF4-271ENST00000630319 TBC1D2Q9BYX2 928 aa12.58□□□□□ -0.4
TCF4-271ENST00000630319 KDM4AO75164 1064 aa12.57□□□□□ -0.4
TCF4-271ENST00000630319 KMT5BQ4FZB7 885 aa12.56□□□□□ -0.4
TCF4-271ENST00000630319 NYAP1Q6ZVC0 841 aa12.56□□□□□ -0.4
TCF4-271ENST00000630319 PTPN5P54829 565 aa12.55□□□□□ -0.4
TCF4-271ENST00000630319 TMEM132AQ24JP5 1023 aa12.55□□□□□ -0.4
TCF4-271ENST00000630319 MYSM1Q5VVJ2 828 aa12.55□□□□□ -0.4
TCF4-271ENST00000630319 USP46P62068 366 aa12.54□□□□□ -0.4
TCF4-271ENST00000630319 FUT2Q10981 343 aa12.54□□□□□ -0.4
TCF4-271ENST00000630319 DIXDC1Q155Q3 683 aa12.54□□□□□ -0.4
TCF4-271ENST00000630319 SH3D19Q5HYK7 790 aa12.54□□□□□ -0.4
TCF4-271ENST00000630319 NUTM1Q86Y26 1132 aa12.54□□□□□ -0.4
TCF4-271ENST00000630319 PRR14Q9BWN1 585 aa12.54□□□□□ -0.4
TCF4-271ENST00000630319 GOPCQ9HD26 462 aa12.54□□□□□ -0.4
TCF4-271ENST00000630319 HOXA2O43364 376 aa12.53□□□□□ -0.4
TCF4-271ENST00000630319 RSPH6AQ9H0K4 717 aa12.52□□□□□ -0.41
TCF4-271ENST00000630319 MOXD2PA6NHM9 499 aa12.51□□□□□ -0.41
TCF4-271ENST00000630319 HCSTQ9UBK5 93 aa12.51□□□□□ -0.41
TCF4-271ENST00000630319 ATP6V1AP38606 617 aa12.5□□□□□ -0.41
TCF4-271ENST00000630319 SPTLC1O15269 473 aa12.49□□□□□ -0.41
TCF4-271ENST00000630319 GJA5P36382 358 aa12.49□□□□□ -0.41
TCF4-271ENST00000630319 SKIV2LQ15477 1246 aaKnown RBP12.49□□□□□ -0.41
TCF4-271ENST00000630319 MORN1Q5T089 497 aa12.49□□□□□ -0.41
TCF4-271ENST00000630319 RSBN1LQ6PCB5 846 aaPredicted RBP12.49□□□□□ -0.41
TCF4-271ENST00000630319 HLA-CQ95604 372 aa12.49□□□□□ -0.41
TCF4-271ENST00000630319 NDUFV2P19404 249 aa12.48□□□□□ -0.41
TCF4-271ENST00000630319 PUS10Q3MIT2 529 aaKnown RBP12.47□□□□□ -0.41
TCF4-271ENST00000630319 LIMD1Q9UGP4 676 aa12.47□□□□□ -0.41
TCF4-271ENST00000630319 TUSC1Q2TAM9 212 aa12.46□□□□□ -0.41
TCF4-271ENST00000630319 RIC3Q7Z5B4 369 aa12.46□□□□□ -0.41
TCF4-271ENST00000630319 PCDHB3Q9Y5E6 796 aa12.46□□□□□ -0.41
TCF4-271ENST00000630319 CLK2P49760 499 aaKnown RBP12.45□□□□□ -0.42
TCF4-271ENST00000630319 GUCA2AQ02747 115 aa12.45□□□□□ -0.42
TCF4-271ENST00000630319 GRIPAP1Q4V328 841 aa12.45□□□□□ -0.42
TCF4-271ENST00000630319 POLR3EQ9NVU0 708 aa12.45□□□□□ -0.42
TCF4-271ENST00000630319 PCDHGC3Q9UN70 934 aa12.45□□□□□ -0.42
TCF4-271ENST00000630319 BLOC1S3Q6QNY0 202 aa12.44□□□□□ -0.42
TCF4-271ENST00000630319 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.44□□□□□ -0.42
TCF4-271ENST00000630319 SLC27A5Q9Y2P5 690 aa12.44□□□□□ -0.42
TCF4-271ENST00000630319 TJAP1Q5JTD0 557 aa12.43□□□□□ -0.42
TCF4-271ENST00000630319 PROCA1Q8NCQ7 364 aaPredicted RBP12.43□□□□□ -0.42
TCF4-271ENST00000630319 FDX1P10109 184 aa12.42□□□□□ -0.42
TCF4-271ENST00000630319 MTRQ99707 1265 aa12.42□□□□□ -0.42
TCF4-271ENST00000630319 PCDHB15Q9Y5E8 787 aa12.42□□□□□ -0.42
TCF4-271ENST00000630319 SCUBE3Q8IX30 993 aa12.41□□□□□ -0.42
TCF4-271ENST00000630319 FBXO31Q5XUX0 539 aaPredicted RBP12.4□□□□□ -0.42
TCF4-271ENST00000630319 THAP11Q96EK4 314 aa12.4□□□□□ -0.42
TCF4-271ENST00000630319 PCMTD1Q96MG8 357 aaPredicted RBP12.39□□□□□ -0.43
TCF4-271ENST00000630319 SALL2Q9Y467 1007 aaPredicted RBP12.39□□□□□ -0.43
TCF4-271ENST00000630319 NR1I2O75469 434 aa12.38□□□□□ -0.43
TCF4-271ENST00000630319 COPS2P61201 443 aa12.38□□□□□ -0.43
TCF4-271ENST00000630319 LILRB3O75022 631 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms